FFCP PHASE1:Hg19::chr19:47220191..47220198,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25865 | |EntrezGene=25865 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17293 | |HGNC=17293 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BZL6 | |UniProt=Q9BZL6 | ||
|association_with_transcript=185bp_to_ENST00000291281,ENST00000433867,NM_001079880,NM_016457,uc002pfi.2,uc002pfj.2_5end | |association_with_transcript=185bp_to_ENST00000291281,ENST00000433867,NM_001079880,NM_016457,uc002pfi.2,uc002pfj.2_5end | ||
|cluster_id=chr19:47220191..47220198,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_14_at_PRKD2_5end | |description=CAGE_peak_14_at_PRKD2_5end | ||
|id=chr19:47220191..47220198,- | |id=chr19:47220191..47220198,- | ||
|ontology_enrichment_celltype=CL:0002139!9.93e-29!24;CL:0000115!4.27e-28!35;CL:0000071!1.67e-23!18;CL:0002546!1.67e-23!18;CL:0002078!5.06e-22!44;CL:0000213!7.57e-20!57;CL:0000215!7.57e-20!57;CL:1000413!8.38e-14!9;CL:0002543!3.27e-10!6;CL:0002544!1.37e-09!6;CL:0000076!4.25e-09!62;CL:0002322!2.31e-07!5;CL:0005020!7.10e-07!6;CL:0002138!7.10e-07!6;CL:0005022!7.10e-07!6 | |ontology_enrichment_celltype=CL:0002139!9.93e-29!24;CL:0000115!4.27e-28!35;CL:0000071!1.67e-23!18;CL:0002546!1.67e-23!18;CL:0002078!5.06e-22!44;CL:0000213!7.57e-20!57;CL:0000215!7.57e-20!57;CL:1000413!8.38e-14!9;CL:0002543!3.27e-10!6;CL:0002544!1.37e-09!6;CL:0000076!4.25e-09!62;CL:0002322!2.31e-07!5;CL:0005020!7.10e-07!6;CL:0002138!7.10e-07!6;CL:0005022!7.10e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.24e-82;24!CL:0000115;3.50e-77;36!CL:0000071;2.86e-74;18!CL:0002078;8.47e-45;45!CL:0002543;4.86e-42;6!CL:0000213;5.49e-34;58!CL:0000215;5.49e-34;58!CL:1000413;8.44e-28;9!CL:0002618;3.75e-22;3!CL:0002262;6.68e-16;2!CL:1000398;6.68e-16;2!CL:0002188;6.21e-14;5!CL:0002138;7.58e-12;6!CL:0000076;1.80e-11;63!CL:0002544;2.80e-11;6!CL:0002144;1.34e-10;3!CL:1000746;4.27e-10;7!CL:1000612;4.27e-10;7!CL:1000449;5.87e-08;15!CL:1000497;4.95e-07;17!CL:0002518;4.95e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.01e-92,36;CL:0002139,1.15e-82,24;CL:0000071,2.36e-74,18;CL:0002546,2.36e-74,18;CL:0002078,2.03e-73,45;CL:0000213,4.20e-56,58;CL:0000215,4.20e-56,58;CL:0002543,3.05e-42,6;CL:1000413,8.45e-28,9;CL:0000222,7.80e-25,121;CL:0002618,4.66e-22,3;CL:0000076,2.08e-19,63;CL:0002262,5.56e-16,2;CL:1000398,5.56e-16,2;CL:0002188,6.64e-14,5;CL:0000066,4.09e-12,253;CL:0005020,8.15e-12,6;CL:0002138,8.15e-12,6;CL:0005022,8.15e-12,6;CL:0002544,2.96e-11,6;CL:0002144,1.55e-10,3;CL:1000746,4.47e-10,7;CL:1000612,4.47e-10,7;CL:0002321,8.63e-10,250;CL:1000449,5.76e-08,15;CL:1000497,4.87e-07,17;CL:0002518,4.87e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;2.86e-74;18!CL:0005022;7.58e-12;6!CL:0000222;8.79e-10;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.67e-23!18;UBERON:0004638!1.67e-23!18;UBERON:0004852!1.67e-23!18;UBERON:0000487!4.05e-18!22;UBERON:0006914!3.10e-15!25;UBERON:0003915!8.38e-14!9;UBERON:0004700!8.38e-14!9;UBERON:0001917!8.38e-14!9;UBERON:0000055!3.12e-10!69;UBERON:0002049!4.90e-10!79;UBERON:0007798!4.90e-10!79;UBERON:0001638!2.15e-08!9;UBERON:0003920!2.15e-08!9;UBERON:0004582!2.15e-08!9;UBERON:0004535!4.61e-08!110;UBERON:0001981!9.64e-08!60;UBERON:0007500!9.64e-08!60;UBERON:0004537!9.64e-08!60;UBERON:0006965!9.64e-08!60;UBERON:0004872!1.17e-07!84;UBERON:0001009!1.36e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.86e-74;18!UBERON:0001986;2.86e-74;18!UBERON:0004852;2.86e-74;18!UBERON:0000487;2.57e-60;22!UBERON:0006914;8.89e-53;25!UBERON:0000490;1.58e-40;33!UBERON:0001638;6.50e-28;9!UBERON:0003920;6.50e-28;9!UBERON:0004582;6.50e-28;9!UBERON:0003915;8.44e-28;9!UBERON:0004700;8.44e-28;9!UBERON:0001917;8.44e-28;9!UBERON:0007500;6.86e-19;56!UBERON:0001981;6.86e-19;56!UBERON:0004537;6.86e-19;56!UBERON:0000055;2.19e-17;65!UBERON:0001281;6.68e-16;2!UBERON:0003497;6.68e-16;2!UBERON:0003909;6.68e-16;2!UBERON:0003835;6.68e-16;2!UBERON:0003914;1.84e-15;74!UBERON:0002066;1.57e-13;5!UBERON:0000353;3.22e-12;15!UBERON:0002049;1.24e-11;75!UBERON:0007798;1.24e-11;75!UBERON:0001280;6.63e-11;3!UBERON:0004647;6.63e-11;3!UBERON:0010523;1.34e-10;3!UBERON:0001915;1.34e-10;3!UBERON:0001982;1.34e-10;3!UBERON:0000074;4.27e-10;7!UBERON:0001229;4.27e-10;7!UBERON:0000025;4.50e-10;93!UBERON:0000119;5.00e-09;139!UBERON:0001473;5.29e-09;8!UBERON:0004536;5.29e-09;8!UBERON:0006558;5.29e-09;8!UBERON:0000996;9.46e-09;1!UBERON:0004535;2.10e-08;109!UBERON:0001009;5.71e-08;112!UBERON:0006555;5.87e-08;15!UBERON:0004819;5.87e-08;15!UBERON:0001285;5.87e-08;15!UBERON:0007684;5.87e-08;15!UBERON:0010260;9.81e-08;9!UBERON:0004111;1.27e-07;130!UBERON:0000483;2.25e-07;136!UBERON:0002465;2.74e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.36e-74,18;UBERON:0001986,2.36e-74,18;UBERON:0004852,2.36e-74,18;UBERON:0000487,2.20e-60,22;UBERON:0006914,7.76e-53,25;UBERON:0000055,1.60e-34,68;UBERON:0002049,1.22e-29,78;UBERON:0007798,1.22e-29,78;UBERON:0001638,4.79e-28,9;UBERON:0003920,4.79e-28,9;UBERON:0004582,4.79e-28,9;UBERON:0007500,7.18e-28,59;UBERON:0001981,7.18e-28,59;UBERON:0004537,7.18e-28,59;UBERON:0006965,7.18e-28,59;UBERON:0003915,8.45e-28,9;UBERON:0004700,8.45e-28,9;UBERON:0001917,8.45e-28,9;UBERON:0003914,9.99e-21,117;UBERON:0004535,3.47e-20,109;UBERON:0001009,1.51e-19,112;UBERON:0004872,6.25e-19,83;UBERON:0001281,5.56e-16,2;UBERON:0003497,5.56e-16,2;UBERON:0003909,5.56e-16,2;UBERON:0003835,5.56e-16,2;UBERON:0004111,2.32e-14,240;UBERON:0002066,1.79e-13,5;UBERON:0000025,2.01e-12,192;UBERON:0000353,3.15e-12,15;UBERON:0000490,4.28e-12,148;UBERON:0001280,5.87e-11,3;UBERON:0004647,5.87e-11,3;UBERON:0005171,5.87e-11,3;UBERON:0010523,1.55e-10,3;UBERON:0001915,1.55e-10,3;UBERON:0001982,1.55e-10,3;UBERON:0010532,4.47e-10,7;UBERON:0000074,4.47e-10,7;UBERON:0001229,4.47e-10,7;UBERON:0001230,4.47e-10,7;UBERON:0003220,4.47e-10,7;UBERON:0005749,4.47e-10,7;UBERON:0004199,4.47e-10,7;UBERON:0004209,4.47e-10,7;UBERON:0004198,4.47e-10,7;UBERON:0000058,1.31e-09,19;UBERON:0003081,4.58e-09,203;UBERON:0001473,5.58e-09,8;UBERON:0004536,5.58e-09,8;UBERON:0006558,5.58e-09,8;UBERON:0005103,7.11e-09,8;UBERON:0000083,7.11e-09,8;UBERON:0009201,7.11e-09,8;UBERON:0006553,7.11e-09,8;UBERON:0003074,7.11e-09,8;UBERON:0003060,7.11e-09,8;UBERON:0000996,9.46e-09,1;UBERON:0000483,4.38e-08,306;UBERON:0004211,5.76e-08,15;UBERON:0009773,5.76e-08,15;UBERON:0001231,5.76e-08,15;UBERON:0001285,5.76e-08,15;UBERON:0007684,5.76e-08,15;UBERON:0004208,5.76e-08,15;UBERON:0000119,5.77e-08,309;UBERON:0000080,6.14e-08,9;UBERON:0002120,6.14e-08,9;UBERON:0004875,6.14e-08,9;UBERON:0005721,6.14e-08,9;UBERON:0005754,6.14e-08,9;UBERON:0007297,6.14e-08,9;UBERON:0010260,1.05e-07,9;UBERON:0006555,1.79e-07,16;UBERON:0004819,1.79e-07,16;UBERON:0002465,2.86e-07,10 | |||
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| ||
|short_description=p14@PRKD2 | |short_description=p14@PRKD2 | ||
}} | }} |
Latest revision as of 21:30, 18 September 2015
Short description: | p14@PRKD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_PRKD2_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 185bp_to_ENST00000291281, ENST00000433867, NM_001079880, NM_016457, uc002pfi.2, uc002pfj.2_5end |
EntrezGene: | PRKD2 |
HGNC: | 17293 |
UniProt: | Q9BZL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.01e-92 | 36 |
endothelial cell of vascular tree | 1.15e-82 | 24 |
blood vessel endothelial cell | 2.36e-74 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.36e-74 | 18 |
meso-epithelial cell | 2.03e-73 | 45 |
lining cell | 4.20e-56 | 58 |
barrier cell | 4.20e-56 | 58 |
vein endothelial cell | 3.05e-42 | 6 |
endothelial cell of artery | 8.45e-28 | 9 |
mesodermal cell | 7.80e-25 | 121 |
endothelial cell of umbilical vein | 4.66e-22 | 3 |
squamous epithelial cell | 2.08e-19 | 63 |
endothelial cell of sinusoid | 5.56e-16 | 2 |
endothelial cell of hepatic sinusoid | 5.56e-16 | 2 |
glomerular endothelial cell | 6.64e-14 | 5 |
epithelial cell | 4.09e-12 | 253 |
lymphangioblast | 8.15e-12 | 6 |
endothelial cell of lymphatic vessel | 8.15e-12 | 6 |
vascular lymphangioblast | 8.15e-12 | 6 |
aortic endothelial cell | 2.96e-11 | 6 |
capillary endothelial cell | 1.55e-10 | 3 |
glomerular cell | 4.47e-10 | 7 |
kidney corpuscule cell | 4.47e-10 | 7 |
embryonic cell | 8.63e-10 | 250 |
epithelial cell of nephron | 5.76e-08 | 15 |
kidney cell | 4.87e-07 | 17 |
kidney epithelial cell | 4.87e-07 | 17 |