FFCP PHASE1:Hg19::chr19:54062603..54062676,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:54062603..54062676,+ | |||
|coexpression_cluster_id=C437 | |||
|description=CAGE_peak_at_chr19:54062603..54062676,+ | |description=CAGE_peak_at_chr19:54062603..54062676,+ | ||
|id=chr19:54062603..54062676,+ | |id=chr19:54062603..54062676,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.89e-13!140;CL:0002057!7.44e-13!42;CL:0000860!5.16e-12!45;CL:0002031!5.59e-11!124;CL:0000557!9.59e-11!71;CL:0002087!1.74e-10!119;CL:0000766!2.06e-10!76;CL:0000839!1.97e-09!70;CL:0002009!4.10e-09!65;CL:0002194!3.20e-08!63;CL:0000576!3.20e-08!63;CL:0000040!3.20e-08!63;CL:0000559!3.20e-08!63;CL:0000037!4.85e-08!172;CL:0000566!4.85e-08!172;CL:0002032!2.09e-07!165;CL:0000837!2.09e-07!165;CL:0000988!4.00e-07!182 | |ontology_enrichment_celltype=CL:0000738!3.89e-13!140;CL:0002057!7.44e-13!42;CL:0000860!5.16e-12!45;CL:0002031!5.59e-11!124;CL:0000557!9.59e-11!71;CL:0002087!1.74e-10!119;CL:0000766!2.06e-10!76;CL:0000839!1.97e-09!70;CL:0002009!4.10e-09!65;CL:0002194!3.20e-08!63;CL:0000576!3.20e-08!63;CL:0000040!3.20e-08!63;CL:0000559!3.20e-08!63;CL:0000037!4.85e-08!172;CL:0000566!4.85e-08!172;CL:0002032!2.09e-07!165;CL:0000837!2.09e-07!165;CL:0000988!4.00e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.45e-12;33!CL:0002057;4.45e-12;33!CL:0000624;8.60e-12;6!CL:0000473;1.69e-09;39!CL:0000234;1.69e-09;39!CL:0000576;1.34e-07;48!CL:0000791;1.58e-07;18!CL:0000789;1.58e-07;18!CL:0002419;1.58e-07;18!CL:0000766;1.66e-07;69!CL:0000623;3.83e-07;3!CL:0000226;7.55e-07;3!CL:0000842;7.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.11e-17,136;CL:0002031,3.87e-16,120;CL:0002087,2.41e-15,115;CL:0000860,7.74e-13,42;CL:0002057,7.74e-13,42;CL:0000557,1.68e-12,67;CL:0000037,1.76e-12,168;CL:0000624,6.09e-12,6;CL:0000473,1.37e-11,48;CL:0000234,1.37e-11,48;CL:0000988,3.48e-11,177;CL:0002032,4.48e-11,161;CL:0000837,4.48e-11,161;CL:0000766,4.82e-11,72;CL:0002009,1.05e-10,61;CL:0000839,1.44e-10,66;CL:0002194,4.12e-09,59;CL:0000576,4.12e-09,59;CL:0000040,4.12e-09,59;CL:0000559,4.12e-09,59;CL:0000791,1.35e-07,18;CL:0000789,1.35e-07,18;CL:0002420,1.35e-07,18;CL:0002419,1.35e-07,18;CL:0000790,1.35e-07,18;CL:0000623,3.89e-07,3;CL:0000825,3.89e-07,3;CL:0000763,6.25e-07,108;CL:0000049,6.25e-07,108;CL:0000226,7.47e-07,3;CL:0000842,7.47e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.05e-10;42!CL:0000790;1.58e-07;18!UBERON:0005062;2.34e-07;4!UBERON:0007284;2.34e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.08e-19!115;UBERON:0001049!1.18e-13!57;UBERON:0005068!1.18e-13!57;UBERON:0006241!1.18e-13!57;UBERON:0007135!1.18e-13!57;UBERON:0002780!3.27e-13!41;UBERON:0001890!3.27e-13!41;UBERON:0006240!3.27e-13!41;UBERON:0003080!1.49e-12!42;UBERON:0002616!3.48e-11!59;UBERON:0000955!8.49e-11!69;UBERON:0006238!8.49e-11!69;UBERON:0001017!1.46e-10!82;UBERON:0002390!6.17e-10!102;UBERON:0003061!6.17e-10!102;UBERON:0002020!1.19e-09!34;UBERON:0003528!1.19e-09!34;UBERON:0001893!1.27e-09!34;UBERON:0005743!1.42e-09!86;UBERON:0002791!2.40e-09!33;UBERON:0002346!4.69e-09!90;UBERON:0001474!5.48e-09!86;UBERON:0002371!6.51e-09!80;UBERON:0001869!1.05e-08!32;UBERON:0003075!1.52e-08!86;UBERON:0007284!1.52e-08!86;UBERON:0002193!2.06e-08!112;UBERON:0000073!4.69e-08!94;UBERON:0001016!4.69e-08!94;UBERON:0001950!1.39e-07!20;UBERON:0002619!2.82e-07!22 | |ontology_enrichment_uberon=UBERON:0007023!4.08e-19!115;UBERON:0001049!1.18e-13!57;UBERON:0005068!1.18e-13!57;UBERON:0006241!1.18e-13!57;UBERON:0007135!1.18e-13!57;UBERON:0002780!3.27e-13!41;UBERON:0001890!3.27e-13!41;UBERON:0006240!3.27e-13!41;UBERON:0003080!1.49e-12!42;UBERON:0002616!3.48e-11!59;UBERON:0000955!8.49e-11!69;UBERON:0006238!8.49e-11!69;UBERON:0001017!1.46e-10!82;UBERON:0002390!6.17e-10!102;UBERON:0003061!6.17e-10!102;UBERON:0002020!1.19e-09!34;UBERON:0003528!1.19e-09!34;UBERON:0001893!1.27e-09!34;UBERON:0005743!1.42e-09!86;UBERON:0002791!2.40e-09!33;UBERON:0002346!4.69e-09!90;UBERON:0001474!5.48e-09!86;UBERON:0002371!6.51e-09!80;UBERON:0001869!1.05e-08!32;UBERON:0003075!1.52e-08!86;UBERON:0007284!1.52e-08!86;UBERON:0002193!2.06e-08!112;UBERON:0000073!4.69e-08!94;UBERON:0001016!4.69e-08!94;UBERON:0001950!1.39e-07!20;UBERON:0002619!2.82e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.51e-07;4!UBERON:0010133;1.51e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.59e-11,76;UBERON:0001474,1.31e-10,82;UBERON:0002390,2.57e-10,98;UBERON:0003061,2.57e-10,98;UBERON:0002193,2.68e-09,108;UBERON:0002405,2.71e-09,93;UBERON:0004765,5.45e-09,90;UBERON:0007023,5.88e-09,114;UBERON:0001049,7.02e-09,56;UBERON:0005068,7.02e-09,56;UBERON:0006241,7.02e-09,56;UBERON:0007135,7.02e-09,56;UBERON:0001434,4.71e-08,100;UBERON:0002346,7.45e-08,86;UBERON:0000073,9.67e-08,53;UBERON:0002616,9.67e-08,53;UBERON:0003296,2.17e-07,4;UBERON:0010133,2.17e-07,4;UBERON:0003075,4.63e-07,82;UBERON:0007284,4.63e-07,82;UBERON:0002780,5.41e-07,41;UBERON:0001890,5.41e-07,41;UBERON:0003080,5.41e-07,41;UBERON:0006240,5.41e-07,41 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0.393364276848904,0,0.154816123316076,0,0,0,0,0.284338464974843,0,0.553995408531877,6.81851121398482,5.4252717678963,0,0.32389366601898,0.515151135268373,0.290796477559129,0.377875943688809,0.485168122375632,0.929716147622738,7.81218987241469,4.33588919253145,2.3015391385772,3.58624989140741,0.236482229888585,2.06847408441971,7.74581620300591,2.70852973188684,3.38836211176688,2.18324920046277,0.449446968890169,1.83650335422542,1.28371610830437,5.11469700639233,0,1.39624560335142,0,1.16083695451434,1.13477044938228,0.622822248995575,8.54245461872927,6.77927793946262,0.217188844705117,1.21079900526674,0.736555271975129,0,1.05627643155971,0.425208599930087,0,0.898629049171961,0.300353785683013,0.32145117339416,0,0,0.365328307529268,0,0,0,0,0,0,0,0,20.4916668879401,11.7447437874188,17.9668417218858,0,2.24203425192614,0,21.0479454021801,24.3666672904482,25.4945858759391,0.334372990781356,6.51844533267181,3.31413464014313,3.89653456815823,0.111410456885174,5.30290633454707,0.664601683750863,4.87446954777028,0.384273959177026,0.520237390239513,0.657751618414705,0.552700035571697,0.579606171470105,9.49034004237187,2.94294910898684,3.1360657141493,0.113309342697566,1.91610246800961,1.37450978193052,4.55435445635105,0,0,0,0.150575119077773,0,0,0,0,12.2980113367087,21.6626558584641,29.1097051804426,0,0,0,0,0,0.144846518960824,0,0,0,0,0.43917392846563,0.196468613246569,0,0,0,0.522389211897802,0,2.8618874916641,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.993943903390637,0,0.264818361626438,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0,0.211931901159562,0.300091096084402,0,0.515281080091258,0.18611685633159,0.337552664482532,0,0.504867548488229,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0.243947412259191,0,0,0.10366105501537,0,1.45990943630332,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0.179117045405697,0,0,0.985326475791887,0.352193736052904,11.1957182392017,4.4677185559258,3.02981840223312,0,0,0,0,0,0.300343057843917,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.710783897485092,0,0,0,0.099972991182057,0,1.00451418286425,0,0,0,0,0,0,0,0.112085143993527,11.4277840917118,17.2502059887614,22.3316883126762,0,0,0.773288812777695,0.167516265334349,1.27587750330633,1.49801404789436,2.99161459204025,0.414415513436035,0.12269149171914,0,0,0.623912584592421,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,9.71809722777571,5.39285502046542,7.89783927745488,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.246381468041427,0,0.116210378459959,0.725156697549733,0,0.276242966807689,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.183138929636687,0.330037999682352,0,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0.0890320356467374,0,0,0.255225424989168,0.10115778085555,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0,0.540031437238115,0,0,0.962479855263359,0,0.371606350251437,0,0.640276590135727,0.637705090915289,0,0,0.211673582723883,0.324621940274555,0,0,0,0,0,0,0.403599414382095,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0.18714054040822,1.17206543417515,0,0.111443384277478,0,0,0,0,1.9882952955326,0.422008249231538,0,0,1.26675244876796,3.18796781201712,0.552567831062295,0,0,0,0.311039587661807,0,0,0,1.7755813014648,0,0,0.969332746095218,0.556608588971108,0,0.260427761085233,0.349839999984783,0,0,0,0.709163045303809,0,0,0.868124974666461,2.65722415744152,0.964771509003264,1.52581736317083,2.65390223834939,1.18219047581419,0.438770794307945,0,0,0.384751292518985,0.227884111694002,0.23056390438806,0.179515288819544,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0.210998064528027,0,0.141353071433941,0,0,0,0.611030144933625,0.593042257361244,0.370691816839509,0.104421949505455,1.28062152663286,0,0.702793337176017,0,0,0.242780379534093,1.57833761139756,1.20990716048664,0.91821828489147,0.379119477770928,0,0.207376382794494,0,0,0,0,0,0.416024019039416,0,0,0,1.57254001417827,0.343972064943233,0.0967563312890851,0.0730893170861856,0,0.193978032976839,0.264768380074501,0,0,0,0.696418755514666,1.36885967914362,0.160317640503067,1.49417096317547,0,0,0,0.343189995723929,0.14405479798815,0.248505071130865,1.17847017308398,0.135904206073614,0.104602846312333,0.101998217636322,0.866851769704557,2.40168115483916,0.410716136675979,0,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| ||
|short_description=p@chr19:54062603..54062676,+ | |short_description=p@chr19:54062603..54062676,+ | ||
}} | }} |
Latest revision as of 17:00, 27 July 2015
Short description: | p@chr19:54062603..54062676, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:54062603..54062676, + |
Coexpression cluster: | C437_CD4_CD8_Natural_CD19_thyroid_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.59e-11 | 76 |
bone element | 1.31e-10 | 82 |
hematopoietic system | 2.57e-10 | 98 |
blood island | 2.57e-10 | 98 |
hemolymphoid system | 2.68e-09 | 108 |
immune system | 2.71e-09 | 93 |
skeletal element | 5.45e-09 | 90 |
adult organism | 5.88e-09 | 114 |
neural tube | 7.02e-09 | 56 |
neural rod | 7.02e-09 | 56 |
future spinal cord | 7.02e-09 | 56 |
neural keel | 7.02e-09 | 56 |
skeletal system | 4.71e-08 | 100 |
neurectoderm | 7.45e-08 | 86 |
regional part of nervous system | 9.67e-08 | 53 |
regional part of brain | 9.67e-08 | 53 |
gland of diencephalon | 2.17e-07 | 4 |
neuroendocrine gland | 2.17e-07 | 4 |
neural plate | 4.63e-07 | 82 |
presumptive neural plate | 4.63e-07 | 82 |
regional part of forebrain | 5.41e-07 | 41 |
forebrain | 5.41e-07 | 41 |
anterior neural tube | 5.41e-07 | 41 |
future forebrain | 5.41e-07 | 41 |