FFCP PHASE1:Hg19::chr2:170683918..170683927,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130507 | |EntrezGene=130507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30467 | |HGNC=30467 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZT12 | |UniProt=Q6ZT12 | ||
|association_with_transcript=-40bp_to_ENST00000272793_5end | |association_with_transcript=-40bp_to_ENST00000272793_5end | ||
|cluster_id=chr2:170683918..170683927,+ | |||
|description=CAGE_peak_3_at_UBR3_5end | |description=CAGE_peak_3_at_UBR3_5end | ||
|id=chr2:170683918..170683927,+ | |id=chr2:170683918..170683927,+ | ||
|ontology_enrichment_celltype=CL:0000838!2.09e-11!52;CL:0000542!2.24e-11!53;CL:0000051!2.24e-11!53;CL:0000791!4.40e-08!18;CL:0000789!4.40e-08!18;CL:0002420!4.40e-08!18;CL:0002419!4.40e-08!18;CL:0000790!4.40e-08!18 | |ontology_enrichment_celltype=CL:0000838!2.09e-11!52;CL:0000542!2.24e-11!53;CL:0000051!2.24e-11!53;CL:0000791!4.40e-08!18;CL:0000789!4.40e-08!18;CL:0002420!4.40e-08!18;CL:0002419!4.40e-08!18;CL:0000790!4.40e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0000791;9.03e-09;18!CL:0000789;9.03e-09;18!CL:0002419;9.03e-09;18!CL:0000236;1.54e-08;13!CL:0000625;2.04e-08;11!CL:0000542;6.65e-08;53!CL:0000084;9.62e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.41e-12,52;CL:0000542,1.08e-11,53;CL:0000051,1.08e-11,53;CL:0000791,6.19e-09,18;CL:0000789,6.19e-09,18;CL:0002420,6.19e-09,18;CL:0002419,6.19e-09,18;CL:0000790,6.19e-09,18;CL:0000625,2.51e-08,11;CL:0000236,1.11e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;9.03e-09;18!UBERON:0006601;1.58e-08;82!CL:0000051;6.65e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.69e-38!115;UBERON:0001049!1.67e-23!57;UBERON:0005068!1.67e-23!57;UBERON:0006241!1.67e-23!57;UBERON:0007135!1.67e-23!57;UBERON:0001017!3.86e-22!82;UBERON:0005743!5.47e-22!86;UBERON:0002616!1.73e-20!59;UBERON:0000955!7.45e-20!69;UBERON:0006238!7.45e-20!69;UBERON:0003080!9.80e-20!42;UBERON:0000073!1.54e-19!94;UBERON:0001016!1.54e-19!94;UBERON:0002780!3.02e-19!41;UBERON:0001890!3.02e-19!41;UBERON:0006240!3.02e-19!41;UBERON:0003075!2.04e-16!86;UBERON:0007284!2.04e-16!86;UBERON:0001893!1.30e-15!34;UBERON:0002020!2.87e-15!34;UBERON:0003528!2.87e-15!34;UBERON:0002346!3.83e-15!90;UBERON:0002791!5.33e-15!33;UBERON:0001869!1.67e-14!32;UBERON:0000153!2.97e-14!129;UBERON:0007811!2.97e-14!129;UBERON:0003056!1.39e-13!61;UBERON:0000033!7.02e-13!123;UBERON:0002619!6.96e-12!22;UBERON:0004121!7.73e-12!169;UBERON:0000924!3.26e-11!173;UBERON:0006601!3.26e-11!173;UBERON:0001950!5.99e-11!20;UBERON:0000956!1.86e-10!25;UBERON:0000203!1.86e-10!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.09e-18;41!UBERON:0001890;5.09e-18;41!UBERON:0001893;1.99e-17;34!UBERON:0002791;4.17e-17;32!UBERON:0001869;5.14e-17;32!UBERON:0003528;7.65e-17;34!UBERON:0002020;7.65e-17;34!UBERON:0000073;8.14e-17;53!UBERON:0002616;8.14e-17;53!UBERON:0002619;1.55e-15;22!UBERON:0001950;2.77e-14;20!UBERON:0000956;1.24e-13;25!UBERON:0000203;1.24e-13;25!UBERON:0000955;3.07e-12;68!UBERON:0007023;3.49e-12;114!UBERON:0001017;7.33e-12;75!UBERON:0001016;4.67e-10;83!UBERON:0002420;4.56e-08;9!UBERON:0007245;4.56e-08;9!UBERON:0010009;4.56e-08;9!UBERON:0010011;4.56e-08;9!UBERON:0000454;4.56e-08;9!UBERON:0000125;8.72e-08;9!UBERON:0002308;8.72e-08;9!UBERON:0009663;3.16e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.33e-47,114;UBERON:0001049,4.47e-31,56;UBERON:0005068,4.47e-31,56;UBERON:0006241,4.47e-31,56;UBERON:0007135,4.47e-31,56;UBERON:0000073,1.07e-28,53;UBERON:0002616,1.07e-28,53;UBERON:0001017,1.68e-26,81;UBERON:0002780,1.30e-25,41;UBERON:0001890,1.30e-25,41;UBERON:0003080,1.30e-25,41;UBERON:0006240,1.30e-25,41;UBERON:0000955,2.19e-25,68;UBERON:0006238,2.19e-25,68;UBERON:0001016,2.34e-24,89;UBERON:0003075,3.14e-21,82;UBERON:0007284,3.14e-21,82;UBERON:0001893,8.20e-21,34;UBERON:0003528,2.37e-20,34;UBERON:0002020,2.37e-20,34;UBERON:0002791,2.39e-19,32;UBERON:0001869,2.41e-19,32;UBERON:0002346,4.21e-19,86;UBERON:0003056,3.32e-17,61;UBERON:0010371,2.49e-16,104;UBERON:0002619,9.41e-16,22;UBERON:0001950,1.59e-14,20;UBERON:0000956,5.57e-14,25;UBERON:0000203,5.57e-14,25;UBERON:0010314,1.72e-13,132;UBERON:0004121,1.70e-12,171;UBERON:0000924,1.70e-12,171;UBERON:0006601,1.70e-12,171;UBERON:0011216,3.79e-11,223;UBERON:0002420,3.12e-08,9;UBERON:0007245,3.12e-08,9;UBERON:0010009,3.12e-08,9;UBERON:0010011,3.12e-08,9;UBERON:0000454,3.12e-08,9;UBERON:0000125,5.41e-08,9;UBERON:0002308,5.41e-08,9;UBERON:0009663,4.44e-07,7;UBERON:0003076,7.50e-07,15;UBERON:0003057,7.50e-07,15 | |||
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| ||
|short_description=p3@UBR3 | |short_description=p3@UBR3 | ||
}} | }} |
Latest revision as of 02:50, 18 September 2015
Short description: | p3@UBR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_UBR3_5end |
Coexpression cluster: | NA |
Association with transcript: | -40bp_to_ENST00000272793_5end |
EntrezGene: | UBR3 |
HGNC: | 30467 |
UniProt: | Q6ZT12 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.41e-12 | 52 |
lymphocyte | 1.08e-11 | 53 |
common lymphoid progenitor | 1.08e-11 | 53 |
mature alpha-beta T cell | 6.19e-09 | 18 |
alpha-beta T cell | 6.19e-09 | 18 |
immature T cell | 6.19e-09 | 18 |
mature T cell | 6.19e-09 | 18 |
immature alpha-beta T cell | 6.19e-09 | 18 |
CD8-positive, alpha-beta T cell | 2.51e-08 | 11 |
B cell | 1.11e-07 | 14 |