FFCP PHASE1:Hg19::chr8:53626974..53627032,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9821 | |EntrezGene=9821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15574 | |HGNC=15574 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TDY2,E5RH44,E5RJC1,E5RH63 | |UniProt=Q8TDY2,E5RH44,E5RJC1,E5RH63 | ||
|association_with_transcript=0bp_to_ENST00000025008,ENST00000435644,ENST00000517963,ENST00000518211,ENST00000518710,ENST00000521611,NM_001083617,NM_014781,uc003xre.3,uc003xrf.3_5end | |association_with_transcript=0bp_to_ENST00000025008,ENST00000435644,ENST00000517963,ENST00000518211,ENST00000518710,ENST00000521611,NM_001083617,NM_014781,uc003xre.3,uc003xrf.3_5end | ||
|cluster_id=chr8:53626974..53627032,- | |||
|description=CAGE_peak_1_at_RB1CC1_5end | |description=CAGE_peak_1_at_RB1CC1_5end | ||
|id=chr8:53626974..53627032,- | |id=chr8:53626974..53627032,- | ||
|ontology_enrichment_celltype=CL:0002057!1.79e-19!42;CL:0000860!8.68e-19!45;CL:0000766!3.30e-16!76;CL:0000839!2.31e-13!70;CL:0000738!3.62e-13!140;CL:0002009!4.61e-13!65;CL:0002194!6.03e-13!63;CL:0000576!6.03e-13!63;CL:0000040!6.03e-13!63;CL:0000559!6.03e-13!63;CL:0000557!7.40e-13!71;CL:0002031!2.98e-11!124;CL:0002087!6.33e-11!119;CL:0000037!1.93e-10!172;CL:0000566!1.93e-10!172;CL:0000763!4.42e-10!112;CL:0000049!4.42e-10!112;CL:0002032!2.73e-09!165;CL:0000837!2.73e-09!165;CL:0000988!3.74e-08!182 | |ontology_enrichment_celltype=CL:0002057!1.79e-19!42;CL:0000860!8.68e-19!45;CL:0000766!3.30e-16!76;CL:0000839!2.31e-13!70;CL:0000738!3.62e-13!140;CL:0002009!4.61e-13!65;CL:0002194!6.03e-13!63;CL:0000576!6.03e-13!63;CL:0000040!6.03e-13!63;CL:0000559!6.03e-13!63;CL:0000557!7.40e-13!71;CL:0002031!2.98e-11!124;CL:0002087!6.33e-11!119;CL:0000037!1.93e-10!172;CL:0000566!1.93e-10!172;CL:0000763!4.42e-10!112;CL:0000049!4.42e-10!112;CL:0002032!2.73e-09!165;CL:0000837!2.73e-09!165;CL:0000988!3.74e-08!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.67e-18;33!CL:0002057;4.67e-18;33!CL:0000576;1.21e-11;48!CL:0000473;5.15e-11;39!CL:0000234;5.15e-11;39!CL:0000766;1.94e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.79e-19,42;CL:0002057,1.79e-19,42;CL:0000766,2.86e-16,72;CL:0000473,1.02e-14,48;CL:0000234,1.02e-14,48;CL:0000839,2.19e-13,66;CL:0002009,4.14e-13,61;CL:0002194,5.29e-13,59;CL:0000576,5.29e-13,59;CL:0000040,5.29e-13,59;CL:0000559,5.29e-13,59;CL:0000738,5.31e-13,136;CL:0000557,7.34e-13,67;CL:0002031,4.28e-11,120;CL:0002087,9.02e-11,115;CL:0000037,3.02e-10,168;CL:0000763,6.25e-10,108;CL:0000049,6.25e-10,108;CL:0002032,4.22e-09,161;CL:0000837,4.22e-09,161;CL:0000988,2.68e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.96e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.09e-26!115;UBERON:0001017!1.60e-15!82;UBERON:0000073!5.02e-15!94;UBERON:0001016!5.02e-15!94;UBERON:0005743!1.11e-14!86;UBERON:0003080!2.61e-14!42;UBERON:0002780!4.47e-14!41;UBERON:0001890!4.47e-14!41;UBERON:0006240!4.47e-14!41;UBERON:0001049!5.12e-14!57;UBERON:0005068!5.12e-14!57;UBERON:0006241!5.12e-14!57;UBERON:0007135!5.12e-14!57;UBERON:0000955!5.12e-14!69;UBERON:0006238!5.12e-14!69;UBERON:0002020!3.03e-13!34;UBERON:0003528!3.03e-13!34;UBERON:0001869!5.32e-13!32;UBERON:0002390!5.75e-13!102;UBERON:0003061!5.75e-13!102;UBERON:0002616!5.86e-13!59;UBERON:0001893!9.31e-13!34;UBERON:0002619!1.61e-12!22;UBERON:0002791!2.21e-12!33;UBERON:0001950!1.31e-11!20;UBERON:0000956!7.75e-11!25;UBERON:0000203!7.75e-11!25;UBERON:0002193!2.55e-10!112;UBERON:0002371!4.73e-10!80;UBERON:0001474!8.01e-09!86;UBERON:0003075!1.51e-08!86;UBERON:0007284!1.51e-08!86;UBERON:0002346!2.99e-08!90;UBERON:0003056!1.33e-07!61;UBERON:0000153!1.40e-07!129;UBERON:0007811!1.40e-07!129;UBERON:0002405!2.50e-07!115;UBERON:0004765!5.38e-07!101;UBERON:0001434!5.38e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.55e-12;22!UBERON:0001869;9.27e-12;32!UBERON:0001950;1.26e-11;20!UBERON:0002791;1.59e-11;32!UBERON:0003528;2.06e-11;34!UBERON:0002020;2.06e-11;34!UBERON:0001893;5.35e-11;34!UBERON:0000956;7.87e-11;25!UBERON:0000203;7.87e-11;25!UBERON:0002780;2.02e-10;41!UBERON:0001890;2.02e-10;41!UBERON:0000073;4.40e-08;53!UBERON:0002616;4.40e-08;53!UBERON:0007023;1.59e-07;114!UBERON:0001017;2.83e-07;75!UBERON:0000955;3.79e-07;68!UBERON:0001016;7.47e-07;83 | |||
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| ||
|short_description=p1@RB1CC1 | |short_description=p1@RB1CC1 | ||
}} | }} |
Latest revision as of 11:50, 18 September 2015
Short description: | p1@RB1CC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RB1CC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000025008, ENST00000435644, ENST00000517963, ENST00000518211, ENST00000518710, ENST00000521611, NM_001083617, NM_014781, uc003xre.3, uc003xrf.3_5end |
EntrezGene: | RB1CC1 |
HGNC: | 15574 |
UniProt: | Q8TDY2E5RH44E5RJC1E5RH63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.79e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.79e-19 | 42 |
myeloid leukocyte | 2.86e-16 | 72 |
defensive cell | 1.02e-14 | 48 |
phagocyte | 1.02e-14 | 48 |
myeloid lineage restricted progenitor cell | 2.19e-13 | 66 |
macrophage dendritic cell progenitor | 4.14e-13 | 61 |
monopoietic cell | 5.29e-13 | 59 |
monocyte | 5.29e-13 | 59 |
monoblast | 5.29e-13 | 59 |
promonocyte | 5.29e-13 | 59 |
leukocyte | 5.31e-13 | 136 |
granulocyte monocyte progenitor cell | 7.34e-13 | 67 |
hematopoietic lineage restricted progenitor cell | 4.28e-11 | 120 |
nongranular leukocyte | 9.02e-11 | 115 |
hematopoietic stem cell | 3.02e-10 | 168 |
myeloid cell | 6.25e-10 | 108 |
common myeloid progenitor | 6.25e-10 | 108 |
hematopoietic oligopotent progenitor cell | 4.22e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.22e-09 | 161 |
hematopoietic cell | 2.68e-08 | 177 |