FFCP PHASE1:Hg19::chr2:50246776..50246779,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9378 | |EntrezGene=9378 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8008 | |HGNC=8008 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-365bp_to_ENST00000378262_5end | |association_with_transcript=-365bp_to_ENST00000378262_5end | ||
|cluster_id=chr2:50246776..50246779,- | |||
|coexpression_cluster_id=C1909 | |||
|description=CAGE_peak_24_at_NRXN1_5end | |description=CAGE_peak_24_at_NRXN1_5end | ||
|id=chr2:50246776..50246779,- | |id=chr2:50246776..50246779,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;8.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.24e-16;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.59e-70!57;UBERON:0005068!5.59e-70!57;UBERON:0006241!5.59e-70!57;UBERON:0007135!5.59e-70!57;UBERON:0002780!1.31e-57!41;UBERON:0001890!1.31e-57!41;UBERON:0006240!1.31e-57!41;UBERON:0002616!1.97e-57!59;UBERON:0001017!2.90e-57!82;UBERON:0003080!4.93e-56!42;UBERON:0005743!4.93e-54!86;UBERON:0002020!8.63e-54!34;UBERON:0003528!8.63e-54!34;UBERON:0001893!1.02e-53!34;UBERON:0002791!1.46e-51!33;UBERON:0001869!5.60e-50!32;UBERON:0000073!6.98e-50!94;UBERON:0001016!6.98e-50!94;UBERON:0000955!3.25e-49!69;UBERON:0006238!3.25e-49!69;UBERON:0002619!5.90e-45!22;UBERON:0003075!8.20e-45!86;UBERON:0007284!8.20e-45!86;UBERON:0002346!1.82e-44!90;UBERON:0000956!6.54e-43!25;UBERON:0000203!6.54e-43!25;UBERON:0001950!2.18e-40!20;UBERON:0003056!8.39e-36!61;UBERON:0007023!1.23e-33!115;UBERON:0000924!2.64e-26!173;UBERON:0006601!2.64e-26!173;UBERON:0004121!5.94e-26!169;UBERON:0000033!7.41e-26!123;UBERON:0000153!4.03e-24!129;UBERON:0007811!4.03e-24!129;UBERON:0000200!5.33e-15!6;UBERON:0003076!1.15e-14!15;UBERON:0003057!1.15e-14!15;UBERON:0000025!4.52e-14!194;UBERON:0002021!3.14e-13!5;UBERON:0001872!5.17e-13!5;UBERON:0002308!2.98e-12!9;UBERON:0000125!2.98e-12!9;UBERON:0001871!3.24e-11!7;UBERON:0004111!1.52e-10!241;UBERON:0002680!8.31e-10!9;UBERON:0001895!8.31e-10!9;UBERON:0010092!8.31e-10!9;UBERON:0000064!1.49e-09!219;UBERON:0004733!2.29e-09!12;UBERON:0002028!2.29e-09!12;UBERON:0007277!2.29e-09!12;UBERON:0002420!2.36e-09!9;UBERON:0007245!2.36e-09!9;UBERON:0010009!2.36e-09!9;UBERON:0010011!2.36e-09!9;UBERON:0000454!2.36e-09!9;UBERON:0000349!1.33e-08!5;UBERON:0004732!1.48e-08!13;UBERON:0002771!1.49e-08!3;UBERON:0009663!1.67e-08!7;UBERON:0002240!6.23e-08!3;UBERON:0000988!7.56e-08!3;UBERON:0000477!9.78e-08!286;UBERON:0006331!1.61e-07!3;UBERON:0002298!4.89e-07!8;UBERON:0000483!8.41e-07!309 | |ontology_enrichment_uberon=UBERON:0001049!5.59e-70!57;UBERON:0005068!5.59e-70!57;UBERON:0006241!5.59e-70!57;UBERON:0007135!5.59e-70!57;UBERON:0002780!1.31e-57!41;UBERON:0001890!1.31e-57!41;UBERON:0006240!1.31e-57!41;UBERON:0002616!1.97e-57!59;UBERON:0001017!2.90e-57!82;UBERON:0003080!4.93e-56!42;UBERON:0005743!4.93e-54!86;UBERON:0002020!8.63e-54!34;UBERON:0003528!8.63e-54!34;UBERON:0001893!1.02e-53!34;UBERON:0002791!1.46e-51!33;UBERON:0001869!5.60e-50!32;UBERON:0000073!6.98e-50!94;UBERON:0001016!6.98e-50!94;UBERON:0000955!3.25e-49!69;UBERON:0006238!3.25e-49!69;UBERON:0002619!5.90e-45!22;UBERON:0003075!8.20e-45!86;UBERON:0007284!8.20e-45!86;UBERON:0002346!1.82e-44!90;UBERON:0000956!6.54e-43!25;UBERON:0000203!6.54e-43!25;UBERON:0001950!2.18e-40!20;UBERON:0003056!8.39e-36!61;UBERON:0007023!1.23e-33!115;UBERON:0000924!2.64e-26!173;UBERON:0006601!2.64e-26!173;UBERON:0004121!5.94e-26!169;UBERON:0000033!7.41e-26!123;UBERON:0000153!4.03e-24!129;UBERON:0007811!4.03e-24!129;UBERON:0000200!5.33e-15!6;UBERON:0003076!1.15e-14!15;UBERON:0003057!1.15e-14!15;UBERON:0000025!4.52e-14!194;UBERON:0002021!3.14e-13!5;UBERON:0001872!5.17e-13!5;UBERON:0002308!2.98e-12!9;UBERON:0000125!2.98e-12!9;UBERON:0001871!3.24e-11!7;UBERON:0004111!1.52e-10!241;UBERON:0002680!8.31e-10!9;UBERON:0001895!8.31e-10!9;UBERON:0010092!8.31e-10!9;UBERON:0000064!1.49e-09!219;UBERON:0004733!2.29e-09!12;UBERON:0002028!2.29e-09!12;UBERON:0007277!2.29e-09!12;UBERON:0002420!2.36e-09!9;UBERON:0007245!2.36e-09!9;UBERON:0010009!2.36e-09!9;UBERON:0010011!2.36e-09!9;UBERON:0000454!2.36e-09!9;UBERON:0000349!1.33e-08!5;UBERON:0004732!1.48e-08!13;UBERON:0002771!1.49e-08!3;UBERON:0009663!1.67e-08!7;UBERON:0002240!6.23e-08!3;UBERON:0000988!7.56e-08!3;UBERON:0000477!9.78e-08!286;UBERON:0006331!1.61e-07!3;UBERON:0002298!4.89e-07!8;UBERON:0000483!8.41e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.67e-25;20!UBERON:0001905;5.45e-23;2!UBERON:0002757;5.45e-23;2!UBERON:0010134;5.45e-23;2!UBERON:0005408;5.45e-23;2!UBERON:0001899;5.45e-23;2!UBERON:0002619;6.29e-23;22!UBERON:0002021;1.09e-20;5!UBERON:0000956;3.21e-20;25!UBERON:0000203;3.21e-20;25!UBERON:0002791;2.62e-19;32!UBERON:0001869;4.12e-18;32!UBERON:0002780;2.04e-17;41!UBERON:0001890;2.04e-17;41!UBERON:0000073;4.63e-17;53!UBERON:0002616;4.63e-17;53!UBERON:0001893;2.37e-16;34!UBERON:0003528;2.61e-16;34!UBERON:0002020;2.61e-16;34!UBERON:0002022;2.19e-12;1!UBERON:0001874;2.19e-12;1!UBERON:0003296;5.39e-12;4!UBERON:0010133;5.39e-12;4!UBERON:0002784;5.39e-12;4!UBERON:0001017;8.66e-11;75!UBERON:0000955;4.93e-10;68!UBERON:0001016;5.18e-10;83!UBERON:0001872;8.86e-10;5!UBERON:0002037;2.01e-08;6!UBERON:0001894;3.14e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.24e-28,53;UBERON:0002616,8.24e-28,53;UBERON:0001049,2.90e-26,56;UBERON:0005068,2.90e-26,56;UBERON:0006241,2.90e-26,56;UBERON:0007135,2.90e-26,56;UBERON:0001950,2.56e-25,20;UBERON:0002780,5.39e-25,41;UBERON:0001890,5.39e-25,41;UBERON:0003080,5.39e-25,41;UBERON:0006240,5.39e-25,41;UBERON:0001017,4.18e-24,81;UBERON:0002619,4.52e-23,22;UBERON:0001905,4.89e-23,2;UBERON:0002757,4.89e-23,2;UBERON:0010134,4.89e-23,2;UBERON:0005408,4.89e-23,2;UBERON:0001899,4.89e-23,2;UBERON:0001016,1.45e-21,89;UBERON:0000955,4.32e-21,68;UBERON:0006238,4.32e-21,68;UBERON:0002021,7.30e-21,5;UBERON:0002791,1.35e-20,32;UBERON:0001869,1.35e-20,32;UBERON:0000956,2.40e-20,25;UBERON:0000203,2.40e-20,25;UBERON:0003528,2.26e-19,34;UBERON:0002020,2.26e-19,34;UBERON:0001893,2.26e-19,34;UBERON:0003075,1.56e-17,82;UBERON:0007284,1.56e-17,82;UBERON:0002346,1.19e-16,86;UBERON:0003056,1.58e-16,61;UBERON:0010371,1.65e-13,104;UBERON:0001874,4.31e-12,1;UBERON:0002022,4.81e-12,1;UBERON:0003296,5.10e-12,4;UBERON:0010133,5.10e-12,4;UBERON:0002784,5.10e-12,4;UBERON:0004121,1.79e-10,171;UBERON:0000924,1.79e-10,171;UBERON:0006601,1.79e-10,171;UBERON:0010314,2.64e-10,132;UBERON:0001872,7.44e-10,5;UBERON:0011216,7.12e-09,223;UBERON:0002037,2.25e-08,6;UBERON:0006215,2.25e-08,6;UBERON:0001894,3.05e-07,7;UBERON:0006222,3.05e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,1.17261385734044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.984685914873589,0,0,8.86726714137573,0,0.276283915531148,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,1.72371686620732,0,0.173624994933292,0,0.120596438625408,3.05163472634166,1.21637185924347,0.886642856860642,0.658156191461918,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,0,1.83643656978294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.886351143382302,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,1.03274246318642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.854183854313742,0.625954653532499,0,0,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.247871528518004,0,0,0,0,0,0,0.513833800771676,1.41696576325585,1.75597244962866,0.615349092722265,4.03314713954749,0.138314504928436,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0.781078098613847,1.44680757550829,0.380494861163441,1.64092442705466,0,0,0,0,1.60710550763486,1.3451348888753,0,0.227662191351298,0,0,0,0.40781839786099,0.263091094251396,0,0,0,1.09980912941201,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19370465096821,0,0.11294608203896,0,0.301925687133347,0,0,0,0,0.471353094203252,0.196308467114945,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.135982980381829,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,1.17261385734044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.984685914873589,0,0,8.86726714137573,0,0.276283915531148,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,1.72371686620732,0,0.173624994933292,0,0.120596438625408,3.05163472634166,1.21637185924347,0.886642856860642,0.658156191461918,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,0,1.83643656978294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.886351143382302,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,1.03274246318642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.854183854313742,0.625954653532499,0,0,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.247871528518004,0,0,0,0,0,0,0.513833800771676,1.41696576325585,1.75597244962866,0.615349092722265,4.03314713954749,0.138314504928436,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0.781078098613847,1.44680757550829,0.380494861163441,1.64092442705466,0,0,0,0,1.60710550763486,1.3451348888753,0,0.227662191351298,0,0,0,0.40781839786099,0.263091094251396,0,0,0,1.09980912941201,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19370465096821,0,0.11294608203896,0,0.301925687133347,0,0,0,0,0.471353094203252,0.196308467114945,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.135982980381829,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p24@NRXN1 | |short_description=p24@NRXN1 | ||
}} | }} |
Latest revision as of 13:27, 17 September 2015
Short description: | p24@NRXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_NRXN1_5end |
Coexpression cluster: | C1909_anaplastic_cerebellum_pineal_parietal_temporal_occipital_duodenum |
Association with transcript: | -365bp_to_ENST00000378262_5end |
EntrezGene: | NRXN1 |
HGNC: | 8008 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data