FFCP PHASE1:Hg19::chr3:128444973..128444985,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7879 | |EntrezGene=7879 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9788 | |HGNC=9788 | ||
|TSSclassifier=strong | |||
|UniProt=P51149 | |UniProt=P51149 | ||
|association_with_transcript=0bp_to_NM_004637,uc003eks.1,uc010hsv.1_5end | |association_with_transcript=0bp_to_NM_004637,uc003eks.1,uc010hsv.1_5end | ||
|cluster_id=chr3:128444973..128444985,+ | |||
|description=CAGE_peak_2_at_RAB7A_5end | |description=CAGE_peak_2_at_RAB7A_5end | ||
|id=chr3:128444973..128444985,+ | |id=chr3:128444973..128444985,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.15e-16!76;CL:0000839!4.22e-14!70;CL:0000557!1.59e-13!71;CL:0002009!5.09e-12!65;CL:0002194!9.93e-12!63;CL:0000576!9.93e-12!63;CL:0000040!9.93e-12!63;CL:0000559!9.93e-12!63;CL:0002057!1.14e-09!42;CL:0000860!4.42e-09!45 | |ontology_enrichment_celltype=CL:0000766!1.15e-16!76;CL:0000839!4.22e-14!70;CL:0000557!1.59e-13!71;CL:0002009!5.09e-12!65;CL:0002194!9.93e-12!63;CL:0000576!9.93e-12!63;CL:0000040!9.93e-12!63;CL:0000559!9.93e-12!63;CL:0002057!1.14e-09!42;CL:0000860!4.42e-09!45 | ||
|ontology_enrichment_celltype_v019=CL:0000473;7.64e-10;39!CL:0000234;7.64e-10;39!CL:0000860;1.32e-08;33!CL:0002057;1.32e-08;33!CL:0000766;1.85e-08;69!CL:0000576;4.66e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.11e-17,72;CL:0000839,4.88e-15,66;CL:0000557,2.06e-14,67;CL:0002009,7.00e-13,61;CL:0002194,1.35e-12,59;CL:0000576,1.35e-12,59;CL:0000040,1.35e-12,59;CL:0000559,1.35e-12,59;CL:0000473,2.14e-12,48;CL:0000234,2.14e-12,48;CL:0000860,1.14e-09,42;CL:0002057,1.14e-09,42 | |||
|ontology_enrichment_development_v019=CL:0002057;1.79e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.69e-14!115;UBERON:0000062!1.20e-12!511;UBERON:0001049!2.62e-12!57;UBERON:0005068!2.62e-12!57;UBERON:0006241!2.62e-12!57;UBERON:0007135!2.62e-12!57;UBERON:0002371!4.25e-12!80;UBERON:0001474!1.03e-10!86;UBERON:0002780!1.62e-10!41;UBERON:0001890!1.62e-10!41;UBERON:0006240!1.62e-10!41;UBERON:0003080!1.98e-10!42;UBERON:0002616!4.09e-10!59;UBERON:0004765!3.37e-09!101;UBERON:0001434!3.37e-09!101;UBERON:0000467!5.73e-09!625;UBERON:0002390!6.29e-09!102;UBERON:0003061!6.29e-09!102;UBERON:0001893!1.03e-08!34;UBERON:0000480!1.11e-08!626;UBERON:0002193!1.27e-08!112;UBERON:0000468!1.33e-08!659;UBERON:0002020!1.44e-08!34;UBERON:0003528!1.44e-08!34;UBERON:0002405!1.46e-08!115;UBERON:0002791!2.75e-08!33;UBERON:0000923!4.95e-08!604;UBERON:0005291!4.95e-08!604;UBERON:0006598!4.95e-08!604;UBERON:0002532!4.95e-08!604;UBERON:0002050!5.84e-08!605;UBERON:0005423!5.84e-08!605;UBERON:0000922!6.22e-08!612;UBERON:0001869!7.94e-08!32;UBERON:0003075!1.82e-07!86;UBERON:0007284!1.82e-07!86;UBERON:0000955!2.18e-07!69;UBERON:0006238!2.18e-07!69;UBERON:0002619!2.54e-07!22 | |ontology_enrichment_uberon=UBERON:0007023!7.69e-14!115;UBERON:0000062!1.20e-12!511;UBERON:0001049!2.62e-12!57;UBERON:0005068!2.62e-12!57;UBERON:0006241!2.62e-12!57;UBERON:0007135!2.62e-12!57;UBERON:0002371!4.25e-12!80;UBERON:0001474!1.03e-10!86;UBERON:0002780!1.62e-10!41;UBERON:0001890!1.62e-10!41;UBERON:0006240!1.62e-10!41;UBERON:0003080!1.98e-10!42;UBERON:0002616!4.09e-10!59;UBERON:0004765!3.37e-09!101;UBERON:0001434!3.37e-09!101;UBERON:0000467!5.73e-09!625;UBERON:0002390!6.29e-09!102;UBERON:0003061!6.29e-09!102;UBERON:0001893!1.03e-08!34;UBERON:0000480!1.11e-08!626;UBERON:0002193!1.27e-08!112;UBERON:0000468!1.33e-08!659;UBERON:0002020!1.44e-08!34;UBERON:0003528!1.44e-08!34;UBERON:0002405!1.46e-08!115;UBERON:0002791!2.75e-08!33;UBERON:0000923!4.95e-08!604;UBERON:0005291!4.95e-08!604;UBERON:0006598!4.95e-08!604;UBERON:0002532!4.95e-08!604;UBERON:0002050!5.84e-08!605;UBERON:0005423!5.84e-08!605;UBERON:0000922!6.22e-08!612;UBERON:0001869!7.94e-08!32;UBERON:0003075!1.82e-07!86;UBERON:0007284!1.82e-07!86;UBERON:0000955!2.18e-07!69;UBERON:0006238!2.18e-07!69;UBERON:0002619!2.54e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.40e-08;41!UBERON:0001890;8.40e-08;41!UBERON:0001893;1.06e-07;34!UBERON:0002619;2.59e-07;22!UBERON:0003528;3.13e-07;34!UBERON:0002020;3.13e-07;34!UBERON:0000073;3.98e-07;53!UBERON:0002616;3.98e-07;53!UBERON:0002791;5.38e-07;32!UBERON:0001869;5.56e-07;32 | |||
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| ||
|short_description=p2@RAB7A | |short_description=p2@RAB7A | ||
}} | }} |
Latest revision as of 07:20, 20 September 2015
Short description: | p2@RAB7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAB7A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_004637, uc003eks.1, uc010hsv.1_5end |
EntrezGene: | RAB7A |
HGNC: | 9788 |
UniProt: | P51149 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.11e-17 | 72 |
myeloid lineage restricted progenitor cell | 4.88e-15 | 66 |
granulocyte monocyte progenitor cell | 2.06e-14 | 67 |
macrophage dendritic cell progenitor | 7.00e-13 | 61 |
monopoietic cell | 1.35e-12 | 59 |
monocyte | 1.35e-12 | 59 |
monoblast | 1.35e-12 | 59 |
promonocyte | 1.35e-12 | 59 |
defensive cell | 2.14e-12 | 48 |
phagocyte | 2.14e-12 | 48 |
classical monocyte | 1.14e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-09 | 42 |