FFCP PHASE1:Hg19::chr3:49027308..49027340,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54681 | |EntrezGene=54681 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28858 | |HGNC=28858 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NXG6 | |UniProt=Q9NXG6 | ||
|association_with_transcript=0bp_to_ENST00000343546,ENST00000383729,ENST00000472301,NM_177938,NM_177939,uc003cvg.2,uc003cvh.2_5end | |association_with_transcript=0bp_to_ENST00000343546,ENST00000383729,ENST00000472301,NM_177938,NM_177939,uc003cvg.2,uc003cvh.2_5end | ||
|cluster_id=chr3:49027308..49027340,+ | |||
|description=CAGE_peak_2_at_P4HTM_5end | |description=CAGE_peak_2_at_P4HTM_5end | ||
|id=chr3:49027308..49027340,+ | |id=chr3:49027308..49027340,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.32e-13!180;CL:0000057!2.08e-07!75;CL:0000222!2.33e-07!119;CL:0000183!7.18e-07!59;CL:0000393!7.99e-07!60;CL:0000211!7.99e-07!60 | |ontology_enrichment_celltype=CL:0000055!3.32e-13!180;CL:0000057!2.08e-07!75;CL:0000222!2.33e-07!119;CL:0000183!7.18e-07!59;CL:0000393!7.99e-07!60;CL:0000211!7.99e-07!60 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.34e-07,121;CL:0000057,2.43e-07,76;CL:0000393,5.14e-07,61;CL:0000211,5.14e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.68e-23!86;UBERON:0000073!1.40e-22!94;UBERON:0001016!1.40e-22!94;UBERON:0001017!1.90e-22!82;UBERON:0001049!1.15e-21!57;UBERON:0005068!1.15e-21!57;UBERON:0006241!1.15e-21!57;UBERON:0007135!1.15e-21!57;UBERON:0003075!6.96e-21!86;UBERON:0007284!6.96e-21!86;UBERON:0002616!7.92e-21!59;UBERON:0002346!2.87e-19!90;UBERON:0000955!4.77e-19!69;UBERON:0006238!4.77e-19!69;UBERON:0002780!8.27e-19!41;UBERON:0001890!8.27e-19!41;UBERON:0006240!8.27e-19!41;UBERON:0003080!1.63e-18!42;UBERON:0003056!2.93e-18!61;UBERON:0001869!1.37e-17!32;UBERON:0001893!3.10e-17!34;UBERON:0002020!7.98e-17!34;UBERON:0003528!7.98e-17!34;UBERON:0002791!1.37e-16!33;UBERON:0000025!8.33e-15!194;UBERON:0002619!1.60e-14!22;UBERON:0000956!6.67e-14!25;UBERON:0000203!6.67e-14!25;UBERON:0000475!1.13e-13!365;UBERON:0000033!1.52e-13!123;UBERON:0000153!1.84e-13!129;UBERON:0007811!1.84e-13!129;UBERON:0001950!2.72e-13!20;UBERON:0000477!1.56e-12!286;UBERON:0004111!6.57e-11!241;UBERON:0004121!6.79e-11!169;UBERON:0000119!2.01e-10!312;UBERON:0000483!2.13e-10!309;UBERON:0000924!2.87e-10!173;UBERON:0006601!2.87e-10!173;UBERON:0000481!3.27e-10!347;UBERON:0000468!1.27e-08!659;UBERON:0007023!3.68e-08!115;UBERON:0000064!5.97e-07!219 | |ontology_enrichment_uberon=UBERON:0005743!1.68e-23!86;UBERON:0000073!1.40e-22!94;UBERON:0001016!1.40e-22!94;UBERON:0001017!1.90e-22!82;UBERON:0001049!1.15e-21!57;UBERON:0005068!1.15e-21!57;UBERON:0006241!1.15e-21!57;UBERON:0007135!1.15e-21!57;UBERON:0003075!6.96e-21!86;UBERON:0007284!6.96e-21!86;UBERON:0002616!7.92e-21!59;UBERON:0002346!2.87e-19!90;UBERON:0000955!4.77e-19!69;UBERON:0006238!4.77e-19!69;UBERON:0002780!8.27e-19!41;UBERON:0001890!8.27e-19!41;UBERON:0006240!8.27e-19!41;UBERON:0003080!1.63e-18!42;UBERON:0003056!2.93e-18!61;UBERON:0001869!1.37e-17!32;UBERON:0001893!3.10e-17!34;UBERON:0002020!7.98e-17!34;UBERON:0003528!7.98e-17!34;UBERON:0002791!1.37e-16!33;UBERON:0000025!8.33e-15!194;UBERON:0002619!1.60e-14!22;UBERON:0000956!6.67e-14!25;UBERON:0000203!6.67e-14!25;UBERON:0000475!1.13e-13!365;UBERON:0000033!1.52e-13!123;UBERON:0000153!1.84e-13!129;UBERON:0007811!1.84e-13!129;UBERON:0001950!2.72e-13!20;UBERON:0000477!1.56e-12!286;UBERON:0004111!6.57e-11!241;UBERON:0004121!6.79e-11!169;UBERON:0000119!2.01e-10!312;UBERON:0000483!2.13e-10!309;UBERON:0000924!2.87e-10!173;UBERON:0006601!2.87e-10!173;UBERON:0000481!3.27e-10!347;UBERON:0000468!1.27e-08!659;UBERON:0007023!3.68e-08!115;UBERON:0000064!5.97e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.95e-16;32!UBERON:0002791;2.20e-15;32!UBERON:0001893;3.27e-15;34!UBERON:0003528;6.09e-15;34!UBERON:0002020;6.09e-15;34!UBERON:0002619;1.23e-14;22!UBERON:0000956;5.57e-14;25!UBERON:0000203;5.57e-14;25!UBERON:0002780;5.70e-14;41!UBERON:0001890;5.70e-14;41!UBERON:0001950;2.19e-13;20!UBERON:0000073;1.93e-12;53!UBERON:0002616;1.93e-12;53!UBERON:0000955;1.08e-09;68!UBERON:0001017;1.10e-09;75!UBERON:0001016;5.52e-08;83 | |||
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| ||
|short_description=p2@P4HTM | |short_description=p2@P4HTM | ||
}} | }} |
Latest revision as of 15:22, 18 September 2015
Short description: | p2@P4HTM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_P4HTM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000343546, ENST00000383729, ENST00000472301, NM_177938, NM_177939, uc003cvg.2, uc003cvh.2_5end |
EntrezGene: | P4HTM |
HGNC: | 28858 |
UniProt: | Q9NXG6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.34e-07 | 121 |
fibroblast | 2.43e-07 | 76 |
electrically responsive cell | 5.14e-07 | 61 |
electrically active cell | 5.14e-07 | 61 |