FFCP PHASE1:Hg19::chr6:152957909..152957926,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23345 | |EntrezGene=23345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |HGNC=17089 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NF91 | |UniProt=Q8NF91 | ||
|association_with_transcript=13bp_to_uc010kjb.1_5end | |association_with_transcript=13bp_to_uc010kjb.1_5end | ||
|cluster_id=chr6:152957909..152957926,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_20_at_SYNE1_5end | |description=CAGE_peak_20_at_SYNE1_5end | ||
|id=chr6:152957909..152957926,- | |id=chr6:152957909..152957926,- | ||
|ontology_enrichment_celltype=CL:0000625!4.55e-09!11;CL:0000623!9.72e-07!3;CL:0000825!9.72e-07!3 | |ontology_enrichment_celltype=CL:0000625!4.55e-09!11;CL:0000623!9.72e-07!3;CL:0000825!9.72e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.07e-39;3!UBERON:0006222;1.10e-13;1!UBERON:0010122;1.75e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.03e-52!115;UBERON:0001049!1.21e-41!57;UBERON:0005068!1.21e-41!57;UBERON:0006241!1.21e-41!57;UBERON:0007135!1.21e-41!57;UBERON:0002616!1.55e-37!59;UBERON:0001017!6.70e-36!82;UBERON:0000955!3.06e-35!69;UBERON:0006238!3.06e-35!69;UBERON:0005743!1.40e-33!86;UBERON:0002780!8.33e-32!41;UBERON:0001890!8.33e-32!41;UBERON:0006240!8.33e-32!41;UBERON:0003080!7.79e-31!42;UBERON:0000073!1.51e-30!94;UBERON:0001016!1.51e-30!94;UBERON:0003075!1.38e-27!86;UBERON:0007284!1.38e-27!86;UBERON:0002020!2.07e-26!34;UBERON:0003528!2.07e-26!34;UBERON:0001893!3.08e-26!34;UBERON:0001869!6.77e-26!32;UBERON:0002346!8.90e-26!90;UBERON:0002791!8.76e-25!33;UBERON:0002619!3.68e-24!22;UBERON:0001950!2.35e-21!20;UBERON:0000956!1.09e-20!25;UBERON:0000203!1.09e-20!25;UBERON:0003056!8.92e-20!61;UBERON:0000153!6.14e-19!129;UBERON:0007811!6.14e-19!129;UBERON:0000033!3.08e-18!123;UBERON:0004121!4.89e-14!169;UBERON:0000924!2.14e-13!173;UBERON:0006601!2.14e-13!173;UBERON:0004733!1.97e-12!12;UBERON:0002028!1.97e-12!12;UBERON:0007277!1.97e-12!12;UBERON:0003076!1.12e-11!15;UBERON:0003057!1.12e-11!15;UBERON:0004732!2.69e-11!13;UBERON:0000200!5.07e-11!6;UBERON:0001871!4.18e-10!7;UBERON:0000349!3.42e-09!5;UBERON:0000025!4.95e-09!194;UBERON:0002298!1.55e-08!8;UBERON:0002680!6.38e-08!9;UBERON:0001895!6.38e-08!9;UBERON:0010092!6.38e-08!9;UBERON:0002308!3.60e-07!9;UBERON:0000125!3.60e-07!9;UBERON:0002420!5.81e-07!9;UBERON:0007245!5.81e-07!9;UBERON:0010009!5.81e-07!9;UBERON:0010011!5.81e-07!9;UBERON:0000454!5.81e-07!9;UBERON:0001894!6.00e-07!7;UBERON:0006222!6.00e-07!7;UBERON:0000988!8.68e-07!3;UBERON:0004111!9.23e-07!241 | |ontology_enrichment_uberon=UBERON:0007023!1.03e-52!115;UBERON:0001049!1.21e-41!57;UBERON:0005068!1.21e-41!57;UBERON:0006241!1.21e-41!57;UBERON:0007135!1.21e-41!57;UBERON:0002616!1.55e-37!59;UBERON:0001017!6.70e-36!82;UBERON:0000955!3.06e-35!69;UBERON:0006238!3.06e-35!69;UBERON:0005743!1.40e-33!86;UBERON:0002780!8.33e-32!41;UBERON:0001890!8.33e-32!41;UBERON:0006240!8.33e-32!41;UBERON:0003080!7.79e-31!42;UBERON:0000073!1.51e-30!94;UBERON:0001016!1.51e-30!94;UBERON:0003075!1.38e-27!86;UBERON:0007284!1.38e-27!86;UBERON:0002020!2.07e-26!34;UBERON:0003528!2.07e-26!34;UBERON:0001893!3.08e-26!34;UBERON:0001869!6.77e-26!32;UBERON:0002346!8.90e-26!90;UBERON:0002791!8.76e-25!33;UBERON:0002619!3.68e-24!22;UBERON:0001950!2.35e-21!20;UBERON:0000956!1.09e-20!25;UBERON:0000203!1.09e-20!25;UBERON:0003056!8.92e-20!61;UBERON:0000153!6.14e-19!129;UBERON:0007811!6.14e-19!129;UBERON:0000033!3.08e-18!123;UBERON:0004121!4.89e-14!169;UBERON:0000924!2.14e-13!173;UBERON:0006601!2.14e-13!173;UBERON:0004733!1.97e-12!12;UBERON:0002028!1.97e-12!12;UBERON:0007277!1.97e-12!12;UBERON:0003076!1.12e-11!15;UBERON:0003057!1.12e-11!15;UBERON:0004732!2.69e-11!13;UBERON:0000200!5.07e-11!6;UBERON:0001871!4.18e-10!7;UBERON:0000349!3.42e-09!5;UBERON:0000025!4.95e-09!194;UBERON:0002298!1.55e-08!8;UBERON:0002680!6.38e-08!9;UBERON:0001895!6.38e-08!9;UBERON:0010092!6.38e-08!9;UBERON:0002308!3.60e-07!9;UBERON:0000125!3.60e-07!9;UBERON:0002420!5.81e-07!9;UBERON:0007245!5.81e-07!9;UBERON:0010009!5.81e-07!9;UBERON:0010011!5.81e-07!9;UBERON:0000454!5.81e-07!9;UBERON:0001894!6.00e-07!7;UBERON:0006222!6.00e-07!7;UBERON:0000988!8.68e-07!3;UBERON:0004111!9.23e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0004733;3.29e-37;12!UBERON:0002028;3.29e-37;12!UBERON:0002680;7.28e-35;9!UBERON:0001895;7.28e-35;9!UBERON:0004732;2.45e-34;13!UBERON:0002037;8.28e-20;6!UBERON:0002298;4.36e-19;6!UBERON:0000988;2.11e-17;3!UBERON:0001870;2.11e-17;3!UBERON:0000073;1.22e-14;53!UBERON:0002616;1.22e-14;53!UBERON:0000955;5.25e-10;68!UBERON:0007023;2.03e-09;114!UBERON:0001016;4.58e-09;83!UBERON:0001017;1.66e-08;75!UBERON:0001894;4.19e-08;7!UBERON:0001897;1.09e-07;2!UBERON:0010225;1.09e-07;2!UBERON:0003127;1.75e-07;2!UBERON:0001873;1.75e-07;2!UBERON:0002148;1.75e-07;2!UBERON:0002702;1.75e-07;2!UBERON:0006331;1.75e-07;2!UBERON:0009662;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,1.81e-37,12;UBERON:0002028,1.81e-37,12;UBERON:0007277,1.81e-37,12;UBERON:0002680,4.96e-35,9;UBERON:0001895,4.96e-35,9;UBERON:0010092,4.96e-35,9;UBERON:0004732,1.42e-34,13;UBERON:0003076,6.04e-30,15;UBERON:0003057,6.04e-30,15;UBERON:0000073,1.05e-26,53;UBERON:0002616,1.05e-26,53;UBERON:0001049,3.11e-25,56;UBERON:0005068,3.11e-25,56;UBERON:0006241,3.11e-25,56;UBERON:0007135,3.11e-25,56;UBERON:0007023,7.39e-23,114;UBERON:0000955,2.60e-20,68;UBERON:0006238,2.60e-20,68;UBERON:0002037,8.04e-20,6;UBERON:0006215,8.04e-20,6;UBERON:0002298,2.49e-19,6;UBERON:0000988,1.39e-17,3;UBERON:0001870,1.79e-17,3;UBERON:0001017,6.32e-17,81;UBERON:0003075,6.32e-17,82;UBERON:0007284,6.32e-17,82;UBERON:0002346,4.37e-16,86;UBERON:0001016,3.87e-15,89;UBERON:0010371,4.27e-13,104;UBERON:0010314,4.82e-10,132;UBERON:0001894,4.12e-08,7;UBERON:0006222,4.12e-08,7;UBERON:0000025,8.40e-08,192;UBERON:0001897,1.12e-07,2;UBERON:0010225,1.12e-07,2;UBERON:0011216,1.22e-07,223;UBERON:0002702,1.45e-07,2;UBERON:0001873,1.54e-07,2;UBERON:0010122,1.54e-07,2;UBERON:0002148,1.75e-07,2;UBERON:0006331,1.75e-07,2;UBERON:0009662,1.75e-07,2;UBERON:0003127,2.25e-07,2;UBERON:0002780,2.32e-07,41;UBERON:0001890,2.32e-07,41;UBERON:0003080,2.32e-07,41;UBERON:0006240,2.32e-07,41;UBERON:0004121,2.47e-07,171;UBERON:0000924,2.47e-07,171;UBERON:0006601,2.47e-07,171 | |||
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| ||
|short_description=p20@SYNE1 | |short_description=p20@SYNE1 | ||
}} | }} |
Latest revision as of 07:06, 16 September 2015
Short description: | p20@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_SYNE1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 13bp_to_uc010kjb.1_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | Q8NF91 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data