FFCP PHASE1:Hg19::chrX:106171296..106171331,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9075 | |EntrezGene=9075 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2041 | |HGNC=2041 | ||
|TSSclassifier=strong | |||
|UniProt=P57739 | |UniProt=P57739 | ||
|association_with_transcript=-6bp_to_AY358474,BC014424_5end | |association_with_transcript=-6bp_to_AY358474,BC014424_5end | ||
|cluster_id=chrX:106171296..106171331,+ | |||
|description=CAGE_peak_1_at_CLDN2_5end | |description=CAGE_peak_1_at_CLDN2_5end | ||
|id=chrX:106171296..106171331,+ | |id=chrX:106171296..106171331,+ | ||
|ontology_enrichment_celltype=CL:1000497!3.00e-12!18;CL:0002518!3.00e-12!18;CL:1000507!3.91e-12!12;CL:1000494!3.91e-12!12;CL:1000449!3.94e-11!16;CL:0000181!2.57e-10!12;CL:0000417!2.57e-10!12;CL:0000668!2.57e-10!12;CL:0000414!2.57e-10!12;CL:0000412!2.57e-10!12;CL:0000182!2.57e-10!12 | |ontology_enrichment_celltype=CL:1000497!3.00e-12!18;CL:0002518!3.00e-12!18;CL:1000507!3.91e-12!12;CL:1000494!3.91e-12!12;CL:1000449!3.94e-11!16;CL:0000181!2.57e-10!12;CL:0000417!2.57e-10!12;CL:0000668!2.57e-10!12;CL:0000414!2.57e-10!12;CL:0000412!2.57e-10!12;CL:0000182!2.57e-10!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.31e-16;12!CL:0000650;4.34e-09;2!CL:1000500;4.34e-09;2!CL:1000618;4.34e-09;2!CL:1001318;4.34e-09;2!CL:0002173;4.34e-09;2!CL:1000497;4.26e-08;17!CL:0002518;4.26e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.19e-16,12;CL:0000223,3.73e-09,58;CL:0000650,4.92e-09,2;CL:1000500,4.92e-09,2;CL:1000618,4.92e-09,2;CL:1001318,4.92e-09,2;CL:0002173,4.92e-09,2;CL:1000497,4.37e-08,17;CL:0002518,4.37e-08,17 | |||
|ontology_enrichment_development_v019=UBERON:0009497;9.28e-24;13!UBERON:0004161;1.83e-17;11!UBERON:0003104;9.74e-17;31!UBERON:0007297;1.02e-09;2!UBERON:0001041;2.47e-09;30!UBERON:0003918;2.71e-07;10!UBERON:0007687;2.71e-07;10 | |||
|ontology_enrichment_disease=DOID:299!5.28e-07!25 | |ontology_enrichment_disease=DOID:299!5.28e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:299;2.98e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:299,3.00e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0005172!7.55e-24!55;UBERON:0005173!7.55e-24!55;UBERON:0002417!8.41e-21!61;UBERON:0000916!8.41e-21!61;UBERON:0009854!1.89e-19!23;UBERON:0000058!8.15e-19!26;UBERON:0009497!6.26e-18!25;UBERON:0000015!6.26e-18!25;UBERON:0002423!6.26e-18!25;UBERON:0006235!6.26e-18!25;UBERON:0004161!6.26e-18!25;UBERON:0008835!1.10e-17!22;UBERON:0003894!1.10e-17!22;UBERON:0009856!8.72e-17!26;UBERON:0002113!6.06e-16!27;UBERON:0003918!6.06e-16!27;UBERON:0005095!6.06e-16!27;UBERON:0007687!6.06e-16!27;UBERON:0004921!3.39e-15!129;UBERON:0004185!3.39e-15!129;UBERON:0007499!3.60e-15!25;UBERON:0000080!4.79e-15!18;UBERON:0002120!4.79e-15!18;UBERON:0004875!4.79e-15!18;UBERON:0005721!4.79e-15!18;UBERON:0005754!4.79e-15!18;UBERON:0007297!4.79e-15!18;UBERON:0000489!5.67e-15!32;UBERON:0005177!2.21e-14!107;UBERON:0000466!1.03e-13!126;UBERON:0004876!2.72e-13!20;UBERON:0006554!3.94e-13!44;UBERON:0006555!4.92e-13!17;UBERON:0005103!4.92e-13!17;UBERON:0000083!4.92e-13!17;UBERON:0009201!4.92e-13!17;UBERON:0004819!4.92e-13!17;UBERON:0006553!4.92e-13!17;UBERON:0003074!4.92e-13!17;UBERON:0003060!4.92e-13!17;UBERON:0003929!7.23e-13!54;UBERON:0001008!9.66e-13!45;UBERON:0003104!1.11e-12!238;UBERON:0009142!1.11e-12!238;UBERON:0003887!1.53e-12!21;UBERON:0002107!1.96e-12!19;UBERON:0006925!1.96e-12!19;UBERON:0008836!1.96e-12!19;UBERON:0001007!3.72e-12!155;UBERON:0001555!3.72e-12!155;UBERON:0007026!3.72e-12!155;UBERON:0009773!3.91e-12!12;UBERON:0001231!3.91e-12!12;UBERON:0004810!3.91e-12!12;UBERON:0000481!1.55e-11!347;UBERON:0004119!3.47e-11!169;UBERON:0000925!3.47e-11!169;UBERON:0006595!3.47e-11!169;UBERON:0004211!3.94e-11!16;UBERON:0001285!3.94e-11!16;UBERON:0007684!3.94e-11!16;UBERON:0003220!3.94e-11!16;UBERON:0004208!3.94e-11!16;UBERON:0005409!4.66e-11!35;UBERON:0000077!8.93e-11!130;UBERON:0003064!1.94e-10!37;UBERON:0005057!3.82e-10!26;UBERON:0005256!4.48e-10!143;UBERON:0009569!5.16e-10!113;UBERON:0003914!9.77e-10!118;UBERON:0006947!1.71e-09!3;UBERON:0004054!1.71e-09!3;UBERON:0000160!2.70e-09!27;UBERON:0001041!8.11e-09!98;UBERON:0003886!9.84e-09!63;UBERON:0002100!2.57e-08!216;UBERON:0005911!7.53e-08!82;UBERON:0003103!1.21e-07!69;UBERON:0000062!1.45e-07!511;UBERON:0002553!1.93e-07!70;UBERON:0005904!3.46e-07!4;UBERON:0000949!4.36e-07!45;UBERON:0002368!6.39e-07!35;UBERON:0002365!8.64e-07!31;UBERON:0002330!8.64e-07!31 | |ontology_enrichment_uberon=UBERON:0005172!7.55e-24!55;UBERON:0005173!7.55e-24!55;UBERON:0002417!8.41e-21!61;UBERON:0000916!8.41e-21!61;UBERON:0009854!1.89e-19!23;UBERON:0000058!8.15e-19!26;UBERON:0009497!6.26e-18!25;UBERON:0000015!6.26e-18!25;UBERON:0002423!6.26e-18!25;UBERON:0006235!6.26e-18!25;UBERON:0004161!6.26e-18!25;UBERON:0008835!1.10e-17!22;UBERON:0003894!1.10e-17!22;UBERON:0009856!8.72e-17!26;UBERON:0002113!6.06e-16!27;UBERON:0003918!6.06e-16!27;UBERON:0005095!6.06e-16!27;UBERON:0007687!6.06e-16!27;UBERON:0004921!3.39e-15!129;UBERON:0004185!3.39e-15!129;UBERON:0007499!3.60e-15!25;UBERON:0000080!4.79e-15!18;UBERON:0002120!4.79e-15!18;UBERON:0004875!4.79e-15!18;UBERON:0005721!4.79e-15!18;UBERON:0005754!4.79e-15!18;UBERON:0007297!4.79e-15!18;UBERON:0000489!5.67e-15!32;UBERON:0005177!2.21e-14!107;UBERON:0000466!1.03e-13!126;UBERON:0004876!2.72e-13!20;UBERON:0006554!3.94e-13!44;UBERON:0006555!4.92e-13!17;UBERON:0005103!4.92e-13!17;UBERON:0000083!4.92e-13!17;UBERON:0009201!4.92e-13!17;UBERON:0004819!4.92e-13!17;UBERON:0006553!4.92e-13!17;UBERON:0003074!4.92e-13!17;UBERON:0003060!4.92e-13!17;UBERON:0003929!7.23e-13!54;UBERON:0001008!9.66e-13!45;UBERON:0003104!1.11e-12!238;UBERON:0009142!1.11e-12!238;UBERON:0003887!1.53e-12!21;UBERON:0002107!1.96e-12!19;UBERON:0006925!1.96e-12!19;UBERON:0008836!1.96e-12!19;UBERON:0001007!3.72e-12!155;UBERON:0001555!3.72e-12!155;UBERON:0007026!3.72e-12!155;UBERON:0009773!3.91e-12!12;UBERON:0001231!3.91e-12!12;UBERON:0004810!3.91e-12!12;UBERON:0000481!1.55e-11!347;UBERON:0004119!3.47e-11!169;UBERON:0000925!3.47e-11!169;UBERON:0006595!3.47e-11!169;UBERON:0004211!3.94e-11!16;UBERON:0001285!3.94e-11!16;UBERON:0007684!3.94e-11!16;UBERON:0003220!3.94e-11!16;UBERON:0004208!3.94e-11!16;UBERON:0005409!4.66e-11!35;UBERON:0000077!8.93e-11!130;UBERON:0003064!1.94e-10!37;UBERON:0005057!3.82e-10!26;UBERON:0005256!4.48e-10!143;UBERON:0009569!5.16e-10!113;UBERON:0003914!9.77e-10!118;UBERON:0006947!1.71e-09!3;UBERON:0004054!1.71e-09!3;UBERON:0000160!2.70e-09!27;UBERON:0001041!8.11e-09!98;UBERON:0003886!9.84e-09!63;UBERON:0002100!2.57e-08!216;UBERON:0005911!7.53e-08!82;UBERON:0003103!1.21e-07!69;UBERON:0000062!1.45e-07!511;UBERON:0002553!1.93e-07!70;UBERON:0005904!3.46e-07!4;UBERON:0000949!4.36e-07!45;UBERON:0002368!6.39e-07!35;UBERON:0002365!8.64e-07!31;UBERON:0002330!8.64e-07!31 | ||
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| ||
|short_description=p1@CLDN2 | |short_description=p1@CLDN2 | ||
}} | }} |
Latest revision as of 22:20, 18 September 2015
Short description: | p1@CLDN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLDN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_AY358474, BC014424_5end |
EntrezGene: | CLDN2 |
HGNC: | 2041 |
UniProt: | P57739 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.19e-16 | 12 |
endodermal cell | 3.73e-09 | 58 |
mesangial cell | 4.92e-09 | 2 |
kidney interstitial cell | 4.92e-09 | 2 |
juxtaglomerular complex cell | 4.92e-09 | 2 |
renal interstitial pericyte | 4.92e-09 | 2 |
extraglomerular mesangial cell | 4.92e-09 | 2 |
kidney cell | 4.37e-08 | 17 |
kidney epithelial cell | 4.37e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 3.00e-07 | 25 |