FFCP PHASE1:Hg19::chr17:45909077..45909086,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90506 | |EntrezGene=90506 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25047 | |HGNC=25047 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_uc002ima.2,uc002imb.2_5end | |association_with_transcript=-13bp_to_uc002ima.2,uc002imb.2_5end | ||
|cluster_id=chr17:45909077..45909086,+ | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_3_at_LRRC46_5end | |description=CAGE_peak_3_at_LRRC46_5end | ||
|id=chr17:45909077..45909086,+ | |id=chr17:45909077..45909086,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;7.01e-17;2!UBERON:0009117;5.86e-08;10!UBERON:0005564;5.86e-08;10!UBERON:0008947;6.46e-07;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.78e-11!115;UBERON:0001017!8.08e-11!82;UBERON:0004733!2.14e-10!12;UBERON:0002028!2.14e-10!12;UBERON:0007277!2.14e-10!12;UBERON:0003076!3.37e-10!15;UBERON:0003057!3.37e-10!15;UBERON:0005743!5.29e-10!86;UBERON:0001049!9.99e-10!57;UBERON:0005068!9.99e-10!57;UBERON:0006241!9.99e-10!57;UBERON:0007135!9.99e-10!57;UBERON:0002298!1.01e-09!8;UBERON:0000955!1.58e-09!69;UBERON:0006238!1.58e-09!69;UBERON:0004732!1.81e-09!13;UBERON:0000073!1.96e-08!94;UBERON:0001016!1.96e-08!94;UBERON:0002616!4.02e-08!59;UBERON:0001896!8.67e-08!3;UBERON:0005290!8.67e-08!3;UBERON:0010096!8.67e-08!3;UBERON:0000988!3.63e-07!3;UBERON:0002346!4.75e-07!90;UBERON:0003075!7.30e-07!86;UBERON:0007284!7.30e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!2.78e-11!115;UBERON:0001017!8.08e-11!82;UBERON:0004733!2.14e-10!12;UBERON:0002028!2.14e-10!12;UBERON:0007277!2.14e-10!12;UBERON:0003076!3.37e-10!15;UBERON:0003057!3.37e-10!15;UBERON:0005743!5.29e-10!86;UBERON:0001049!9.99e-10!57;UBERON:0005068!9.99e-10!57;UBERON:0006241!9.99e-10!57;UBERON:0007135!9.99e-10!57;UBERON:0002298!1.01e-09!8;UBERON:0000955!1.58e-09!69;UBERON:0006238!1.58e-09!69;UBERON:0004732!1.81e-09!13;UBERON:0000073!1.96e-08!94;UBERON:0001016!1.96e-08!94;UBERON:0002616!4.02e-08!59;UBERON:0001896!8.67e-08!3;UBERON:0005290!8.67e-08!3;UBERON:0010096!8.67e-08!3;UBERON:0000988!3.63e-07!3;UBERON:0002346!4.75e-07!90;UBERON:0003075!7.30e-07!86;UBERON:0007284!7.30e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.60e-21;6!UBERON:0003127;2.16e-17;2!UBERON:0000341;2.76e-17;2!UBERON:0001873;7.01e-17;2!UBERON:0002148;1.39e-16;2!UBERON:0006331;1.39e-16;2!UBERON:0009662;1.39e-16;2!UBERON:0000125;3.15e-14;9!UBERON:0002308;3.15e-14;9!UBERON:0001896;6.92e-12;3!UBERON:0005290;6.92e-12;3!UBERON:0005383;1.43e-11;3!UBERON:0005382;1.43e-11;3!UBERON:0000988;2.25e-11;3!UBERON:0004733;7.14e-11;12!UBERON:0002028;7.14e-11;12!UBERON:0004732;4.76e-10;13!UBERON:0001301;1.32e-09;1!UBERON:0002171;1.32e-09;1!UBERON:0006518;1.32e-09;1!UBERON:0008949;1.32e-09;1!UBERON:0000101;1.32e-09;1!UBERON:0002167;1.32e-09;1!UBERON:0002336;3.12e-09;1!UBERON:0011215;3.12e-09;1!UBERON:0001018;3.12e-09;1!UBERON:0002473;3.12e-09;1!UBERON:0005340;3.12e-09;1!UBERON:0003544;3.12e-09;1!UBERON:0005970;3.12e-09;1!UBERON:0002316;3.12e-09;1!UBERON:0001020;3.12e-09;1!UBERON:0002437;3.12e-09;1!UBERON:0000369;6.73e-09;4!UBERON:0002435;6.73e-09;4!UBERON:0000204;6.73e-09;4!UBERON:0002420;1.93e-08;9!UBERON:0007245;1.93e-08;9!UBERON:0010009;1.93e-08;9!UBERON:0010011;1.93e-08;9!UBERON:0000454;1.93e-08;9!UBERON:0000073;1.12e-07;53!UBERON:0002616;1.12e-07;53!UBERON:0003135;2.60e-07;11!UBERON:0007023;6.69e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.52e-21,6;UBERON:0007023,1.33e-19,114;UBERON:0003127,1.91e-17,2;UBERON:0000341,2.65e-17,2;UBERON:0001873,7.61e-17,2;UBERON:0010122,7.61e-17,2;UBERON:0002148,1.14e-16,2;UBERON:0006331,1.14e-16,2;UBERON:0009662,1.14e-16,2;UBERON:0000125,2.99e-14,9;UBERON:0002308,2.99e-14,9;UBERON:0003076,4.41e-13,15;UBERON:0003057,4.41e-13,15;UBERON:0001049,3.20e-12,56;UBERON:0005068,3.20e-12,56;UBERON:0006241,3.20e-12,56;UBERON:0007135,3.20e-12,56;UBERON:0001896,7.51e-12,3;UBERON:0005290,7.51e-12,3;UBERON:0010096,7.51e-12,3;UBERON:0005383,1.51e-11,3;UBERON:0005382,1.51e-11,3;UBERON:0000988,1.97e-11,3;UBERON:0004733,6.96e-11,12;UBERON:0002028,6.96e-11,12;UBERON:0007277,6.96e-11,12;UBERON:0000073,1.57e-10,53;UBERON:0002616,1.57e-10,53;UBERON:0004732,4.65e-10,13;UBERON:0001017,1.30e-09,81;UBERON:0001301,1.32e-09,1;UBERON:0002171,1.43e-09,1;UBERON:0006518,1.43e-09,1;UBERON:0008949,1.43e-09,1;UBERON:0000101,1.43e-09,1;UBERON:0002167,1.43e-09,1;UBERON:0002336,3.25e-09,1;UBERON:0011215,3.25e-09,1;UBERON:0001018,3.25e-09,1;UBERON:0002473,3.25e-09,1;UBERON:0005340,3.25e-09,1;UBERON:0003544,3.25e-09,1;UBERON:0005970,3.25e-09,1;UBERON:0002316,3.25e-09,1;UBERON:0001020,3.25e-09,1;UBERON:0002437,3.25e-09,1;UBERON:0000369,7.00e-09,4;UBERON:0002435,7.00e-09,4;UBERON:0000204,7.00e-09,4;UBERON:0010082,7.00e-09,4;UBERON:0001016,1.70e-08,89;UBERON:0002420,1.84e-08,9;UBERON:0007245,1.84e-08,9;UBERON:0010009,1.84e-08,9;UBERON:0010011,1.84e-08,9;UBERON:0000454,1.84e-08,9;UBERON:0003075,6.63e-08,82;UBERON:0007284,6.63e-08,82;UBERON:0000955,7.98e-08,68;UBERON:0006238,7.98e-08,68;UBERON:0002346,1.80e-07,86;UBERON:0003135,2.54e-07,11 | |||
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| ||
|short_description=p3@LRRC46 | |short_description=p3@LRRC46 | ||
}} | }} |
Latest revision as of 04:31, 25 September 2015
Short description: | p3@LRRC46 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRC46_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | -13bp_to_uc002ima.2, uc002imb.2_5end |
EntrezGene: | LRRC46 |
HGNC: | 25047 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data