FFCP PHASE1:Hg19::chr19:41823612..41823616,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:41823612..41823616,- | |||
|coexpression_cluster_id=C8 | |coexpression_cluster_id=C8 | ||
|description=CAGE_peak_at_chr19:41823612..41823616,- | |description=CAGE_peak_at_chr19:41823612..41823616,- | ||
|id=chr19:41823612..41823616,- | |id=chr19:41823612..41823616,- | ||
|ontology_enrichment_celltype=CL:0000988!1.28e-15!182;CL:0000037!1.82e-15!172;CL:0000566!1.82e-15!172;CL:0000738!1.34e-13!140;CL:0002032!2.93e-13!165;CL:0000837!2.93e-13!165;CL:0002087!7.07e-13!119;CL:0002031!2.11e-10!124;CL:0002057!4.92e-09!42;CL:0000763!1.57e-08!112;CL:0000049!1.57e-08!112;CL:0000860!6.40e-08!45;CL:0000766!7.55e-08!76;CL:0000839!6.93e-07!70;CL:0002194!7.96e-07!63;CL:0000576!7.96e-07!63;CL:0000040!7.96e-07!63;CL:0000559!7.96e-07!63 | |ontology_enrichment_celltype=CL:0000988!1.28e-15!182;CL:0000037!1.82e-15!172;CL:0000566!1.82e-15!172;CL:0000738!1.34e-13!140;CL:0002032!2.93e-13!165;CL:0000837!2.93e-13!165;CL:0002087!7.07e-13!119;CL:0002031!2.11e-10!124;CL:0002057!4.92e-09!42;CL:0000763!1.57e-08!112;CL:0000049!1.57e-08!112;CL:0000860!6.40e-08!45;CL:0000766!7.55e-08!76;CL:0000839!6.93e-07!70;CL:0002194!7.96e-07!63;CL:0000576!7.96e-07!63;CL:0000040!7.96e-07!63;CL:0000559!7.96e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000623;2.37e-22;3!CL:0000791;9.80e-14;18!CL:0000789;9.80e-14;18!CL:0002419;9.80e-14;18!CL:0002393;3.19e-11;6!CL:0002397;3.19e-11;6!CL:0000624;5.44e-11;6!CL:0000226;3.19e-10;3!CL:0000842;3.19e-10;3!CL:0000542;4.93e-10;53!CL:0000084;9.71e-10;25!CL:0002087;7.34e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.47e-22,3;CL:0000825,2.47e-22,3;CL:0000738,1.46e-20,136;CL:0002087,2.95e-20,115;CL:0000037,2.14e-19,168;CL:0000988,3.43e-18,177;CL:0000838,2.81e-17,52;CL:0000542,6.56e-17,53;CL:0000051,6.56e-17,53;CL:0002032,1.11e-16,161;CL:0000837,1.11e-16,161;CL:0002031,3.27e-15,120;CL:0000791,7.48e-14,18;CL:0000789,7.48e-14,18;CL:0002420,7.48e-14,18;CL:0002419,7.48e-14,18;CL:0000790,7.48e-14,18;CL:0000624,3.61e-11,6;CL:0000226,2.98e-10,3;CL:0000842,2.98e-10,3;CL:0000084,8.04e-10,25;CL:0000827,8.04e-10,25;CL:0000134,1.36e-09,354;CL:0002320,2.59e-09,361;CL:0000219,2.51e-08,386;CL:0002393,1.22e-07,9;CL:0002397,1.22e-07,9;CL:0000048,4.09e-07,427;CL:0000723,6.01e-07,433;CL:0000034,9.90e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000790;9.80e-14;18!CL:0000051;4.93e-10;53!UBERON:0003099;4.25e-08;1!UBERON:0003852;4.25e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.82e-07!102;UBERON:0003061!2.82e-07!102 | |ontology_enrichment_uberon=UBERON:0002390!2.82e-07!102;UBERON:0003061!2.82e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0001000;4.25e-08;1!UBERON:0005705;4.25e-08;1!UBERON:0008193;4.25e-08;1!UBERON:0010912;4.25e-08;1!UBERON:0002514;4.25e-08;1!UBERON:0003457;4.25e-08;1!UBERON:0008907;4.25e-08;1!UBERON:0008001;4.25e-08;1!UBERON:0007213;4.25e-08;1!UBERON:0009891;4.25e-08;1!UBERON:0007914;4.25e-08;1!UBERON:0007375;4.25e-08;1!UBERON:0003323;4.25e-08;1!UBERON:0010258;4.25e-08;1!UBERON:0005253;4.25e-08;1!UBERON:0007842;4.25e-08;1!UBERON:0005352;4.25e-08;1!UBERON:0002397;4.25e-08;1!UBERON:0003113;4.25e-08;1!UBERON:0003277;4.25e-08;1!UBERON:0001709;4.25e-08;1!UBERON:0002244;4.25e-08;1!UBERON:0005620;4.25e-08;1!UBERON:0010364;4.25e-08;1!UBERON:0004288;4.25e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.24e-09,371;UBERON:0005705,4.11e-08,1;UBERON:0008193,4.11e-08,1;UBERON:0010912,4.11e-08,1;UBERON:0002514,4.11e-08,1;UBERON:0003457,4.11e-08,1;UBERON:0008907,4.11e-08,1;UBERON:0008001,4.11e-08,1;UBERON:0007213,4.11e-08,1;UBERON:0009891,4.11e-08,1;UBERON:0007914,4.11e-08,1;UBERON:0009292,4.11e-08,1;UBERON:0003099,4.11e-08,1;UBERON:0007375,4.11e-08,1;UBERON:0003323,4.11e-08,1;UBERON:0010258,4.11e-08,1;UBERON:0007842,4.11e-08,1;UBERON:0009494,4.11e-08,1;UBERON:0010042,4.11e-08,1;UBERON:0010045,4.11e-08,1;UBERON:0010259,4.11e-08,1;UBERON:0010359,4.11e-08,1;UBERON:0009526,4.11e-08,1;UBERON:0002397,4.11e-08,1;UBERON:0003113,4.11e-08,1;UBERON:0003277,4.11e-08,1;UBERON:0001709,4.11e-08,1;UBERON:0004066,4.11e-08,1;UBERON:0002244,4.11e-08,1;UBERON:0005620,4.11e-08,1;UBERON:0004362,4.11e-08,1;UBERON:0010364,4.11e-08,1;UBERON:0010046,4.11e-08,1;UBERON:0005868,4.11e-08,1;UBERON:0007238,4.11e-08,1;UBERON:0004288,4.11e-08,1;UBERON:0004068,4.11e-08,1;UBERON:0010334,4.11e-08,1;UBERON:0003852,4.11e-08,1;UBERON:0010253,4.11e-08,1;UBERON:0001000,5.82e-08,1;UBERON:0005352,5.82e-08,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.305653622991805,0.164201178899891,0.0787107813136792,0.786728553697808,1.53531759238885,0.464448369948228,0,0,0,0.232401601740905,0.284338464974843,0,2.76997704265939,4.8130667392834,2.82114131930607,0.223915474239924,0,0,0.290796477559129,0,0.485168122375632,0.697287110717054,0,0.309706370895104,0,0.768482119587302,0,0,0.645484683583826,0,0.752969358170419,0.272906150057846,0.449446968890169,0.918251677112708,0,0.639337125799041,0.329851300186716,1.19678194572979,0.426224750532694,0.290209238628584,0.56738522469114,0,1.50749199154046,1.5644487552606,0,0,0,0,0,0,0.209658645508376,0,0.300353785683013,0,0,0,0.182664153764634,0,1.09227722252426,0,0,0,0,0,0,1.1384259382189,2.34894875748376,0.764546456250458,0,0,0,1.57367816091066,8.25322601773246,1.64481199199607,0,0,0,0,0,0,0,0,0.25618263945135,0.780356085359269,0.328875809207352,0.552700035571697,0,0,0.267540828089713,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,6.65302252641617,14.7092107680929,6.51709817472595,0,0.670700859703636,0,0,0,0.289693037921647,0,0,0,0,0.175669571386252,0,0,0,0,0.174129737299267,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0.103325781175765,1.18800285728205,0.494533858557114,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0.675105328965065,0,0,0.0920498986422993,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0.224170287987055,4.53170748464433,10.5657511681163,5.64709359630893,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0.82707210449155,3.01999881146064,1.49418580924822,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0.27470839445503,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0.476463550915578,0.411362273086194,0,0,0.79312517629427,0.106824071127473,0,0,0.371606350251437,0,0.142283686696828,0,0,0.191505370132367,0.635020748171649,0.324621940274555,0,0.912938716132769,0.313359791546046,0,0.169291777801603,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,1.4098700508785,0,0,0.242721043499027,0.222886768554957,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.341380344856499,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.0769502585037971,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0.156980256395025,0.166211681900156,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0,0,0,1.18375320854817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522355239482415,0,0.171986032471617,0,0,0,0,0,0.225980740780532,0,0.19871461170299,0,0,0.0801588202515337,0,0.19980960958213,0,0,0.514784993585894,0,0.124252535565433,0,0.271808412147228,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0.199679000498991,0,0,0,0,1.16495949527454,0,0,0.13480708770837,0.0984274815147488,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0.170388021785422,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0.221858103073705,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0.358177682162975,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0.127894371303652,0.107824811396682,0.157265941855896,0.109209638192014,0,0,0.619678821295011,0,0,0,0,1.41070377476274,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0.183428598521679,0,0.381382095467167,0,0.994581110581374,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0.171488009437418,0.0679697329768317,0,0,0.111231401892069,0.235479278551542,0.157115589916002,0,0.913158720509496,0,0,0,0,0.116241425368125,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0.121917924982269,0,0,0,0.485710993059139,0,0.198950775161368,0.11892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| ||
|short_description=p@chr19:41823612..41823616,- | |short_description=p@chr19:41823612..41823616,- | ||
}} | }} |
Latest revision as of 08:17, 26 July 2015
Short description: | p@chr19:41823612..41823616, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:41823612..41823616, - |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.47e-22 | 3 |
pro-NK cell | 2.47e-22 | 3 |
leukocyte | 1.46e-20 | 136 |
nongranular leukocyte | 2.95e-20 | 115 |
hematopoietic stem cell | 2.14e-19 | 168 |
hematopoietic cell | 3.43e-18 | 177 |
lymphoid lineage restricted progenitor cell | 2.81e-17 | 52 |
lymphocyte | 6.56e-17 | 53 |
common lymphoid progenitor | 6.56e-17 | 53 |
hematopoietic oligopotent progenitor cell | 1.11e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.11e-16 | 161 |
hematopoietic lineage restricted progenitor cell | 3.27e-15 | 120 |
mature alpha-beta T cell | 7.48e-14 | 18 |
alpha-beta T cell | 7.48e-14 | 18 |
immature T cell | 7.48e-14 | 18 |
mature T cell | 7.48e-14 | 18 |
immature alpha-beta T cell | 7.48e-14 | 18 |
CD4-positive, alpha-beta T cell | 3.61e-11 | 6 |
single nucleate cell | 2.98e-10 | 3 |
mononuclear cell | 2.98e-10 | 3 |
T cell | 8.04e-10 | 25 |
pro-T cell | 8.04e-10 | 25 |
mesenchymal cell | 1.36e-09 | 354 |
connective tissue cell | 2.59e-09 | 361 |
motile cell | 2.51e-08 | 386 |
intermediate monocyte | 1.22e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.22e-07 | 9 |
multi fate stem cell | 4.09e-07 | 427 |
somatic stem cell | 6.01e-07 | 433 |
stem cell | 9.90e-07 | 441 |