FFCP PHASE1:Hg19::chr1:86044170..86044182,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23576 | |EntrezGene=23576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2715 | |HGNC=2715 | ||
|TSSclassifier=strong | |||
|UniProt=Q5HYC8,B4E3V1 | |UniProt=Q5HYC8,B4E3V1 | ||
|association_with_transcript=-124bp_to_ENST00000535924,NM_001134445,uc001dlc.2_5end | |association_with_transcript=-124bp_to_ENST00000535924,NM_001134445,uc001dlc.2_5end | ||
|cluster_id=chr1:86044170..86044182,- | |||
|coexpression_cluster_id=C4001 | |coexpression_cluster_id=C4001 | ||
|description=CAGE_peak_12_at_DDAH1_5end | |description=CAGE_peak_12_at_DDAH1_5end | ||
|id=chr1:86044170..86044182,- | |id=chr1:86044170..86044182,- | ||
|ontology_enrichment_celltype=CL:0000055!1.25e-36!180;CL:0000222!5.46e-31!119;CL:0000680!9.50e-21!57;CL:0000056!9.50e-21!57;CL:0000355!9.50e-21!57;CL:0000057!2.56e-19!75;CL:0000187!3.26e-19!54;CL:0000183!1.37e-18!59;CL:0000192!1.44e-16!42;CL:0000514!1.44e-16!42;CL:0000359!2.29e-16!32;CL:0000144!2.32e-16!625;CL:0002371!1.65e-15!591;CL:0000393!2.50e-15!60;CL:0000211!2.50e-15!60;CL:0000220!1.87e-14!246;CL:0002321!5.26e-14!248;CL:0000548!2.69e-13!679;CL:0000004!2.69e-13!679;CL:0000255!2.69e-13!679;CL:0000012!8.06e-13!682;CL:0000213!2.16e-11!57;CL:0000215!2.16e-11!57;CL:0000048!6.09e-10!430;CL:0002078!6.10e-10!44;CL:0000723!4.22e-09!436;CL:0000115!6.40e-09!35;CL:0002620!1.13e-08!23;CL:0002139!1.32e-08!24;CL:0000034!4.72e-08!444;CL:0002494!1.31e-07!16;CL:0000071!1.87e-07!18;CL:0002546!1.87e-07!18;CL:0000003!2.11e-07!722 | |ontology_enrichment_celltype=CL:0000055!1.25e-36!180;CL:0000222!5.46e-31!119;CL:0000680!9.50e-21!57;CL:0000056!9.50e-21!57;CL:0000355!9.50e-21!57;CL:0000057!2.56e-19!75;CL:0000187!3.26e-19!54;CL:0000183!1.37e-18!59;CL:0000192!1.44e-16!42;CL:0000514!1.44e-16!42;CL:0000359!2.29e-16!32;CL:0000144!2.32e-16!625;CL:0002371!1.65e-15!591;CL:0000393!2.50e-15!60;CL:0000211!2.50e-15!60;CL:0000220!1.87e-14!246;CL:0002321!5.26e-14!248;CL:0000548!2.69e-13!679;CL:0000004!2.69e-13!679;CL:0000255!2.69e-13!679;CL:0000012!8.06e-13!682;CL:0000213!2.16e-11!57;CL:0000215!2.16e-11!57;CL:0000048!6.09e-10!430;CL:0002078!6.10e-10!44;CL:0000723!4.22e-09!436;CL:0000115!6.40e-09!35;CL:0002620!1.13e-08!23;CL:0002139!1.32e-08!24;CL:0000034!4.72e-08!444;CL:0002494!1.31e-07!16;CL:0000071!1.87e-07!18;CL:0002546!1.87e-07!18;CL:0000003!2.11e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.68e-18;32!CL:0000192;7.19e-12;43!CL:0002494;9.00e-12;16!CL:0000134;4.17e-10;55!CL:0000048;4.58e-10;58!CL:0000723;2.16e-09;61!CL:0000057;4.76e-09;73!CL:0000187;8.45e-08;55!CL:0002320;2.38e-07;188!CL:0002620;5.20e-07;23!CL:0000034;6.68e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,7.03e-20,32;CL:0000057,8.81e-19,76;CL:0000222,1.96e-18,121;CL:0000680,3.71e-15,58;CL:0000056,3.71e-15,58;CL:0000355,3.71e-15,58;CL:0000192,7.52e-15,43;CL:0000514,7.52e-15,43;CL:0000048,1.22e-14,427;CL:0000187,5.37e-14,55;CL:0000723,6.02e-14,433;CL:0000034,4.63e-13,441;CL:0000393,1.22e-11,61;CL:0000211,1.22e-11,61;CL:0002494,1.34e-11,16;CL:0002321,2.12e-07,250;CL:0002620,6.27e-07,23;CL:0000115,6.42e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;7.19e-12;43!CL:0000355;5.45e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!4.29e-08!14 | |ontology_enrichment_disease=DOID:2394!4.29e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.25e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.33e-09,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001637;5.94e-19;42!UBERON:0003509;5.94e-19;42!UBERON:0004572;5.94e-19;42!UBERON:0004573;1.97e-16;33!UBERON:0004571;1.97e-16;33!UBERON:0007500;6.23e-16;56!UBERON:0001981;6.23e-16;56!UBERON:0004537;6.23e-16;56!UBERON:0000055;2.24e-12;65!UBERON:0000947;5.49e-11;21!UBERON:0010191;5.49e-11;21!UBERON:0003914;2.87e-10;74!UBERON:0002049;5.70e-10;75!UBERON:0007798;5.70e-10;75!UBERON:0004535;5.87e-08;109!UBERON:0000948;1.78e-07;22 | |||
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| ||
|short_description=p12@DDAH1 | |short_description=p12@DDAH1 | ||
}} | }} |
Latest revision as of 13:43, 19 September 2015
Short description: | p12@DDAH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_DDAH1_5end |
Coexpression cluster: | C4001_Fibroblast_Smooth_mesenchymal_Mesenchymal_mesothelioma_thyroid_leiomyoma |
Association with transcript: | -124bp_to_ENST00000535924, NM_001134445, uc001dlc.2_5end |
EntrezGene: | DDAH1 |
HGNC: | 2715 |
UniProt: | Q5HYC8B4E3V1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.03e-20 | 32 |
fibroblast | 8.81e-19 | 76 |
mesodermal cell | 1.96e-18 | 121 |
muscle precursor cell | 3.71e-15 | 58 |
myoblast | 3.71e-15 | 58 |
multi-potent skeletal muscle stem cell | 3.71e-15 | 58 |
smooth muscle cell | 7.52e-15 | 43 |
smooth muscle myoblast | 7.52e-15 | 43 |
multi fate stem cell | 1.22e-14 | 427 |
muscle cell | 5.37e-14 | 55 |
somatic stem cell | 6.02e-14 | 433 |
stem cell | 4.63e-13 | 441 |
electrically responsive cell | 1.22e-11 | 61 |
electrically active cell | 1.22e-11 | 61 |
cardiocyte | 1.34e-11 | 16 |
embryonic cell | 2.12e-07 | 250 |
skin fibroblast | 6.27e-07 | 23 |
endothelial cell | 6.42e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.33e-09 | 14 |