FFCP PHASE1:Hg19::chr19:18288780..18288808,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:18288780..18288808,+
|short_description=p4@IFI30
|description=CAGE_peak_4_at_IFI30_5end
|association_with_transcript=118bp_to_AF401212_5end
|EntrezGene=1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10437 | |EntrezGene=10437 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5398 | |HGNC=5398 | ||
|TSSclassifier=strong | |||
|UniProt=Q96P99 | |UniProt=Q96P99 | ||
|association_with_transcript=118bp_to_AF401212_5end | |||
|cluster_id=chr19:18288780..18288808,+ | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_4_at_IFI30_5end | |||
|id=chr19:18288780..18288808,+ | |||
|ontology_enrichment_celltype=CL:0002009!2.05e-38!65;CL:0002194!2.57e-37!63;CL:0000576!2.57e-37!63;CL:0000040!2.57e-37!63;CL:0000559!2.57e-37!63;CL:0000557!5.21e-36!71;CL:0000860!1.42e-35!45;CL:0002057!6.08e-35!42;CL:0000766!2.61e-34!76;CL:0000839!5.32e-34!70;CL:0000738!2.56e-29!140;CL:0002087!8.84e-27!119;CL:0000763!7.84e-25!112;CL:0000049!7.84e-25!112;CL:0002031!1.80e-24!124;CL:0000037!5.49e-22!172;CL:0000566!5.49e-22!172;CL:0000988!5.10e-21!182;CL:0002032!1.58e-20!165;CL:0000837!1.58e-20!165;CL:0002320!2.15e-10!365;CL:0000134!4.86e-10!358;CL:0000048!7.21e-09!430;CL:0000723!2.13e-08!436;CL:0000034!2.82e-08!444;CL:0002393!1.94e-07!9;CL:0002397!1.94e-07!9;CL:0000219!2.46e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.40e-60;33!CL:0002057;7.40e-60;33!CL:0000473;7.68e-60;39!CL:0000234;7.68e-60;39!CL:0000576;3.63e-47;48!CL:0000766;6.42e-32;69!CL:0000763;1.09e-15;100!CL:0000235;2.35e-13;6!CL:0002087;9.23e-12;104!CL:0000738;1.31e-11;136!CL:0002393;2.08e-08;6!CL:0002397;2.08e-08;6!CL:0000569;6.54e-08;4!CL:0002619;6.27e-07;3!CL:0000219;7.18e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.55e-86,48;CL:0000234,2.55e-86,48;CL:0002194,5.34e-86,59;CL:0000576,5.34e-86,59;CL:0000040,5.34e-86,59;CL:0000559,5.34e-86,59;CL:0002009,1.10e-82,61;CL:0000839,2.86e-75,66;CL:0000860,6.04e-74,42;CL:0002057,6.04e-74,42;CL:0000557,6.42e-74,67;CL:0000766,1.33e-70,72;CL:0000763,3.63e-49,108;CL:0000049,3.63e-49,108;CL:0002087,2.92e-43,115;CL:0000738,1.01e-38,136;CL:0002031,6.50e-36,120;CL:0000037,1.91e-30,168;CL:0002032,1.08e-28,161;CL:0000837,1.08e-28,161;CL:0000988,5.13e-28,177;CL:0000134,1.20e-15,354;CL:0002320,5.84e-15,361;CL:0000235,2.66e-13,6;CL:0000219,1.48e-12,386;CL:0000048,6.92e-12,427;CL:0000723,1.92e-11,433;CL:0000034,7.17e-11,441;CL:0002393,3.41e-10,9;CL:0002397,3.41e-10,9;CL:0000569,6.20e-08,4;CL:0000011,6.20e-08,4;CL:0002619,5.29e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;9.77e-53;42!CL:0000049;1.30e-16;108!CL:0000011;6.54e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.05e-43!102;UBERON:0003061!6.05e-43!102;UBERON:0002193!1.44e-42!112;UBERON:0002371!4.63e-34!80;UBERON:0001474!2.75e-30!86;UBERON:0002405!2.76e-27!115;UBERON:0004765!1.40e-24!101;UBERON:0001434!1.40e-24!101;UBERON:0002204!4.14e-15!167;UBERON:0003081!5.33e-14!216;UBERON:0002384!1.34e-09!375;UBERON:0000178!1.90e-09!15;UBERON:0000179!1.90e-09!15;UBERON:0000463!1.90e-09!15;UBERON:0000926!1.13e-08!448;UBERON:0004120!1.13e-08!448;UBERON:0006603!1.13e-08!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.38e-13;15!UBERON:0000179;7.38e-13;15!UBERON:0000463;7.38e-13;15!UBERON:0002390;7.82e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.45e-77,98;UBERON:0003061,3.45e-77,98;UBERON:0002193,3.63e-73,108;UBERON:0002371,2.74e-71,76;UBERON:0001474,6.88e-65,82;UBERON:0002405,6.07e-60,93;UBERON:0004765,1.12e-57,90;UBERON:0001434,2.70e-52,100;UBERON:0003081,2.73e-41,203;UBERON:0002204,2.15e-29,167;UBERON:0000926,1.51e-22,315;UBERON:0004120,1.51e-22,315;UBERON:0006603,1.51e-22,315;UBERON:0002384,5.02e-14,371;UBERON:0000178,6.69e-13,15;UBERON:0000179,6.69e-13,15;UBERON:0000463,6.69e-13,15;UBERON:0000923,1.48e-08,560;UBERON:0010316,1.48e-08,560;UBERON:0005291,1.48e-08,560;UBERON:0006598,1.48e-08,560;UBERON:0010317,1.48e-08,560;UBERON:0002532,1.48e-08,560;UBERON:0002050,2.42e-08,564;UBERON:0005423,1.81e-07,581;UBERON:0000922,6.24e-07,592 | |||
|phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0,0,0,0,0,2.09340350391728,0,0,0.123766352960047,0,1.34465029290355,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0,0,0.916960868975415,0.985207073399349,0.393553906568396,0.393364276848904,0,0.464448369948228,0.919421224478927,0,0.369754010166788,0.154934401160603,0.426507697462265,0,0.553995408531877,3.00816671205213,4.77423915574874,2.91090116511902,5.18229865630367,7.98484259665978,10.9048679084674,12.4699061417307,14.7976277324568,12.551167992907,19.3248907370258,15.7950249156503,16.1107739700404,15.8819638048042,10.6417003449863,7.58440497620561,5.16387746867061,5.41705946377367,15.247629502951,23.7428350550326,18.652049208942,12.2433556948361,11.8743740018155,12.7867425159808,12.5343494070952,14.1619196911359,12.3605177654481,7.54544020434318,7.37600792098482,4.9825779919646,18.0899038984855,26.5956288394303,14.986030284653,6.05399502633369,3.68277635987565,12.0255707227536,8.87272202510155,4.889898899196,1.88692780957538,1.23561494261145,3.60424542819615,2.73233497385036,1.71007646244749,2.78483348078726,0.730656615058536,0,0,0,0,0,0,0.661044872784862,0,0.569212969109448,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0.384273959177026,0.260118695119756,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0.752875595388864,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0,0,0,0,1.62273696827342,1.56716763569341,12.7639642098111,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,1.20848795132744,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,1.72101972449288,0,0,0,0,0,0.134710672069688,0,0.302714855289863,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0.247266929278557,1.82032272387605,0,0,0,0,0,0,0,0,0.89694817844431,0,0,0.600182192168805,0.103052529238439,0.257640540045629,0.18611685633159,0,0.292311015483596,0.252433774244115,0,0.161646056818812,0.355009592516614,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0,0,0,0,0,0,0,0,1.30137480043828,1.01150814046861,1.20505514941741,0.110293972732394,0.871517776369625,0.71181185733329,0.674156540800822,0.588664395376038,1.15424147083917,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.614942192715568,0,0,0,0.201057944823262,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0.380508304469197,0,0,7.87894419479671,2.10603838625314,7.28292695214768,0,0.16798212819886,0.141775097242386,0,0,0,0,0.176096868026452,0.207328115540772,0.288239906833923,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.4332744500643,49.2211949603484,82.2252363983823,0,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0.197030760201927,0,0.385029108839245,0,0,0,0,0.637938751653163,0,2.99161459204025,0.828831026872071,0,0.500170521059677,0.271265023699736,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0.686286847621712,1.03384013061444,2.80428461064202,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0.532685175939381,0.164254312027618,0.519254429183621,2.09178681227927,0.362578348774867,0,0,0,0.182091168006717,0.262248829918848,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0.764628819135115,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0,0,0,0,0,0.924291702687866,0.307007349452259,0,0.107420244868274,0.145016693914229,0.170453254832202,0,0.165284915360978,0,0,0.10115778085555,0,4.09256050879832,0,0,0.532306030317022,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0.842516912477962,0,0.974853958525138,1.05650146756755,0.818999468447914,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0,1.64647446479951,0,0,0,0.670302275535787,2.17781969722645,0.0941438007767792,0,0,0,0,2.53723804616085,3.0585488285695,1.70894156152249,0.714695326373367,1.23408681925858,3.8908398671563,1.62009431171434,1.58625035258854,0.320472213382419,0,0.245040215981032,0.371606350251437,0,0,0.159426272728822,0,0,1.2700414963433,0,1.12318871245384,0,0.156679895773023,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0.988823245360557,0.211125408127993,0,0.552567831062295,0,0,0.123084805461069,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0.724999575434793,0.796554137998498,0,0.709163045303809,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0.179515288819544,0,0,0.0915975934018623,2.13213910407454,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0.104421949505455,0,0,0,0.182454789215666,0,0,0,1.20990716048664,0,0.252746318513952,0,0,0.664653872707185,0,0,0,0,0,0.520679215005393,0,0.174118413160805,0,0,0.19351266257817,0.438535902517113,0.492692742319255,0.193978032976839,0,0.225980740780532,0,0,0,0.391102765469606,0,0,1.39866726707491,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0.13480708770837,0.0984274815147488,0.254019996197353,0,0,0,0.137539436597234,1.66176135211674,0.899895566206002,0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| ||
|short_description=p4@IFI30 | |||
}} | }} |
Latest revision as of 14:19, 16 September 2015
Short description: | p4@IFI30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IFI30_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | 118bp_to_AF401212_5end |
EntrezGene: | IFI30 |
HGNC: | 5398 |
UniProt: | Q96P99 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.45e-77 | 98 |
blood island | 3.45e-77 | 98 |
hemolymphoid system | 3.63e-73 | 108 |
bone marrow | 2.74e-71 | 76 |
bone element | 6.88e-65 | 82 |
immune system | 6.07e-60 | 93 |
skeletal element | 1.12e-57 | 90 |
skeletal system | 2.70e-52 | 100 |
lateral plate mesoderm | 2.73e-41 | 203 |
musculoskeletal system | 2.15e-29 | 167 |
mesoderm | 1.51e-22 | 315 |
mesoderm-derived structure | 1.51e-22 | 315 |
presumptive mesoderm | 1.51e-22 | 315 |
connective tissue | 5.02e-14 | 371 |
blood | 6.69e-13 | 15 |
haemolymphatic fluid | 6.69e-13 | 15 |
organism substance | 6.69e-13 | 15 |
germ layer | 1.48e-08 | 560 |
germ layer / neural crest | 1.48e-08 | 560 |
embryonic tissue | 1.48e-08 | 560 |
presumptive structure | 1.48e-08 | 560 |
germ layer / neural crest derived structure | 1.48e-08 | 560 |
epiblast (generic) | 1.48e-08 | 560 |
embryonic structure | 2.42e-08 | 564 |
developing anatomical structure | 1.81e-07 | 581 |
embryo | 6.24e-07 | 592 |