FFCP PHASE1:Hg19::chr5:146833322..146833339,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1809 | |EntrezGene=1809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3015 | |HGNC=3015 | ||
|TSSclassifier=strong | |||
|UniProt=Q14195,Q8IXW6 | |UniProt=Q14195,Q8IXW6 | ||
|association_with_transcript=-62bp_to_NM_001387,uc003lon.1_5end | |association_with_transcript=-62bp_to_NM_001387,uc003lon.1_5end | ||
|cluster_id=chr5:146833322..146833339,- | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_8_at_DPYSL3_5end | |description=CAGE_peak_8_at_DPYSL3_5end | ||
|id=chr5:146833322..146833339,- | |id=chr5:146833322..146833339,- | ||
|ontology_enrichment_celltype=CL:0000055!9.45e-12!180;CL:0002319!1.48e-09!25;CL:0000133!1.51e-08!59;CL:0000359!2.80e-08!32 | |ontology_enrichment_celltype=CL:0000055!9.45e-12!180;CL:0002319!1.48e-09!25;CL:0000133!1.51e-08!59;CL:0000359!2.80e-08!32 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.97e-10;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,1.09e-10,59;CL:0002319,1.49e-10,25;CL:0000221,8.86e-08,72;CL:0000359,1.40e-07,32;CL:0000047,3.48e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.48e-20!82;UBERON:0005743!6.53e-20!86;UBERON:0000073!2.06e-18!94;UBERON:0001016!2.06e-18!94;UBERON:0000955!4.13e-15!69;UBERON:0006238!4.13e-15!69;UBERON:0000025!4.71e-15!194;UBERON:0003075!2.18e-14!86;UBERON:0007284!2.18e-14!86;UBERON:0004121!4.21e-14!169;UBERON:0004111!2.70e-13!241;UBERON:0001049!3.04e-13!57;UBERON:0005068!3.04e-13!57;UBERON:0006241!3.04e-13!57;UBERON:0007135!3.04e-13!57;UBERON:0000924!3.29e-13!173;UBERON:0006601!3.29e-13!173;UBERON:0002346!5.28e-13!90;UBERON:0000477!4.36e-12!286;UBERON:0002616!5.84e-12!59;UBERON:0007023!1.12e-11!115;UBERON:0000468!2.26e-11!659;UBERON:0004872!2.37e-11!84;UBERON:0000483!4.49e-10!309;UBERON:0000922!5.10e-10!612;UBERON:0000033!5.13e-10!123;UBERON:0002780!6.98e-10!41;UBERON:0001890!6.98e-10!41;UBERON:0006240!6.98e-10!41;UBERON:0001637!1.24e-09!42;UBERON:0003509!1.24e-09!42;UBERON:0004572!1.24e-09!42;UBERON:0000153!1.58e-09!129;UBERON:0007811!1.58e-09!129;UBERON:0000119!1.59e-09!312;UBERON:0002020!2.05e-09!34;UBERON:0003528!2.05e-09!34;UBERON:0003080!2.51e-09!42;UBERON:0003056!4.87e-09!61;UBERON:0000480!5.13e-09!626;UBERON:0002791!9.25e-09!33;UBERON:0001893!9.39e-09!34;UBERON:0000467!9.66e-09!625;UBERON:0001981!1.22e-08!60;UBERON:0007500!1.22e-08!60;UBERON:0004537!1.22e-08!60;UBERON:0006965!1.22e-08!60;UBERON:0001869!1.52e-08!32;UBERON:0000475!2.22e-08!365;UBERON:0002050!3.80e-08!605;UBERON:0005423!3.80e-08!605;UBERON:0002049!4.66e-08!79;UBERON:0007798!4.66e-08!79;UBERON:0000923!5.51e-08!604;UBERON:0005291!5.51e-08!604;UBERON:0006598!5.51e-08!604;UBERON:0002532!5.51e-08!604;UBERON:0000481!1.47e-07!347;UBERON:0000055!2.99e-07!69;UBERON:0004573!3.01e-07!33;UBERON:0004571!3.01e-07!33;UBERON:0000956!9.66e-07!25;UBERON:0000203!9.66e-07!25 | |ontology_enrichment_uberon=UBERON:0001017!1.48e-20!82;UBERON:0005743!6.53e-20!86;UBERON:0000073!2.06e-18!94;UBERON:0001016!2.06e-18!94;UBERON:0000955!4.13e-15!69;UBERON:0006238!4.13e-15!69;UBERON:0000025!4.71e-15!194;UBERON:0003075!2.18e-14!86;UBERON:0007284!2.18e-14!86;UBERON:0004121!4.21e-14!169;UBERON:0004111!2.70e-13!241;UBERON:0001049!3.04e-13!57;UBERON:0005068!3.04e-13!57;UBERON:0006241!3.04e-13!57;UBERON:0007135!3.04e-13!57;UBERON:0000924!3.29e-13!173;UBERON:0006601!3.29e-13!173;UBERON:0002346!5.28e-13!90;UBERON:0000477!4.36e-12!286;UBERON:0002616!5.84e-12!59;UBERON:0007023!1.12e-11!115;UBERON:0000468!2.26e-11!659;UBERON:0004872!2.37e-11!84;UBERON:0000483!4.49e-10!309;UBERON:0000922!5.10e-10!612;UBERON:0000033!5.13e-10!123;UBERON:0002780!6.98e-10!41;UBERON:0001890!6.98e-10!41;UBERON:0006240!6.98e-10!41;UBERON:0001637!1.24e-09!42;UBERON:0003509!1.24e-09!42;UBERON:0004572!1.24e-09!42;UBERON:0000153!1.58e-09!129;UBERON:0007811!1.58e-09!129;UBERON:0000119!1.59e-09!312;UBERON:0002020!2.05e-09!34;UBERON:0003528!2.05e-09!34;UBERON:0003080!2.51e-09!42;UBERON:0003056!4.87e-09!61;UBERON:0000480!5.13e-09!626;UBERON:0002791!9.25e-09!33;UBERON:0001893!9.39e-09!34;UBERON:0000467!9.66e-09!625;UBERON:0001981!1.22e-08!60;UBERON:0007500!1.22e-08!60;UBERON:0004537!1.22e-08!60;UBERON:0006965!1.22e-08!60;UBERON:0001869!1.52e-08!32;UBERON:0000475!2.22e-08!365;UBERON:0002050!3.80e-08!605;UBERON:0005423!3.80e-08!605;UBERON:0002049!4.66e-08!79;UBERON:0007798!4.66e-08!79;UBERON:0000923!5.51e-08!604;UBERON:0005291!5.51e-08!604;UBERON:0006598!5.51e-08!604;UBERON:0002532!5.51e-08!604;UBERON:0000481!1.47e-07!347;UBERON:0000055!2.99e-07!69;UBERON:0004573!3.01e-07!33;UBERON:0004571!3.01e-07!33;UBERON:0000956!9.66e-07!25;UBERON:0000203!9.66e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.25e-07;42!UBERON:0003509;9.25e-07;42!UBERON:0004572;9.25e-07;42 | |||
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|phase1_expression=0.363356758541113,0,0.704772020479856,1.0007329835313,3.12872766099101,2.61701557230111,0,0,0,0.245733936501509,0.697801167972428,0.873765488520689,1.05506791291381,0.495065411840187,0.662794751455832,5.3786011716142,3.61616716814386,3.65155045193687,2.43966399395253,2.95490539384291,0.408001382488506,9.09018692286455,4.00730381983479,2.05311637609326,1.50651167513763,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0.290796477559129,0,0.242584061187816,0.464858073811369,0.411167888021826,0,0,0,0,0,0,0,0,0.272906150057846,0.449446968890169,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.434377689410233,1.21079900526674,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,1.44575660953827,0,0.289693037921647,3.1811437882044,1.94653948121054,3.40325341790644,3.99112915432615,5.09441757020131,0.392937226493138,0,0,0,0,0,0,0,0,0.993812036833525,0,0,0.56530794192401,0.838998872419812,1.10047216776027,0.417989933073621,0,0,0.33472061276467,0.805658634218294,0.760272105718513,0.732186172644509,0,1.62028389576352,0,0.22452937262617,0,0,0,0.732806975721629,0,0,0,0.993943903390637,2.02608818663328,0.794455084879313,1.14734648299525,1.41867352879343,5.04609840128076,5.33744978648525,3.45334567784024,0.622422070799533,0.942974704487816,0.980771418680752,0.302714855289863,0,0.937285727335186,0,0,0,0,0.161872944368132,0.140450806702248,0,0.245668634623536,0.516628905878827,2.37600571456411,1.48360157567134,0,0.718618141816238,0,0,0,0.877955241761676,0.612975591598039,1.05166641234618,2.60894021268048,0.538168907066586,0.640672166455702,0.211931901159562,0,0.412210116953756,0.257640540045629,1.11670113798954,0.168776332241266,0.779496041289589,0,0.0920498986422993,0.646584227275248,0.710019185033229,0.503760491138201,0.508681776931463,0,0,0,1.58565817968474,1.45782745153634,1.85910308591229,1.24393266018445,3.02785021050754,3.28479623168247,0,0,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,4.5273141246454,4.41026134156626,0,0,1.18157981336281,0,0.122988438543114,0.343135620597051,0,0,0,0,0.651616610620649,0,0,2.20267769452646,8.10119990227169,0.144366447761074,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,2.71470603091333,0,0,2.39344304926383,2.08014873822732,0,0,0,0,0,0.823240336780769,0,0.355391948742546,0.791951872933429,0.301439377059586,2.61460037580088,2.0994328148232,0,0,0,2.87549826589899,0,2.85273810081437,0,0,0,0,0,0,0.128343036279748,2.28685161800217,33.8363620029816,17.0123538811093,39.0312898229033,19.1381625495949,0,0,0,1.10422342547226,0,0.271265023699736,1.03985430765404,1.42743191037729,0.157702415033935,0.937131319941706,0.902838299183157,2.27407504055985,2.0694614258501,0.664225598535437,0.737476674166813,0.173767228936166,0,1.37257369524342,0,0,0,0.606255142892519,0,1.5119514666484,0.248107807818777,0.61384789315225,1.68396056659844,0.512556597022804,0.511707249066704,1.76939313257968,2.96836132889982,0.154209693802656,0.532685175939381,0.246381468041427,0.519254429183621,0,0.483437798366489,0.200506470303285,0,0.114814448164607,0.910455840033585,1.04899531967539,0,0.15403067420883,0,0,0.844413031143006,0,0.340187410553031,0.863663664408557,0,2.43851793789468,2.00675909541941,0,0,0,0,0,0,1.31205858279882,0,0.412164046590889,0.54941678891006,0.41254749960294,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0.145016693914229,0,0.178064071293475,0,0,0,0,0.464845549297286,0,0,3.08033580176089,0.532306030317022,2.60979897622522,2.96518750566272,6.72686967687359,0.372158369359667,0.316379424718726,1.5250415513906,0,0.42793898803392,0.318203247925937,0.78494864019923,0,0.274537029736055,0.117812402345686,0.606547444719948,0,0.842516912477962,0,1.94970791705028,2.11300293513511,0.136499911407986,0,0,1.65409603063837,1.99031692572366,1.75380354101505,0,0,5.2756698010303,3.0982349809975,1.40847801266121,0.286822704408103,0.491245205065606,6.4200789266625,0,2.11107635297664,0.329294892959902,0,0.699869440489966,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,2.14870036263921,1.78178808499583,5.22173193568695,2.98244294329889,1.26602474769461,0.111308705022906,0,0,2.19172787076177,1.38141957765574,0.251932747854276,0.102268682502155,0,0.933118762985422,0,0,0,1.57829449019094,0,0,1.93866549219044,1.29875337426592,39.9227596002388,0,0,0,0,0,0,0,0,0.520874984799877,1.77148277162768,0.723578631752448,0,0.331737779793674,0.886642856860642,0.87754158861589,0,0,1.07730361905316,0.341826167541004,0,0,0,0.638002319463839,1.00757352742049,0,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0,0.989471500037586,1.73110911793673,0.995261931078505,0.265372693510018,0.611030144933625,0,0,0,0.67401132980677,1.60515529459758,2.10838001152805,0,0,0,2.36750641709634,0,49.8898601457699,1.26373159256976,0,0,0,0,0,0,0,0,0,0,0,1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| ||
|short_description=p8@DPYSL3 | |short_description=p8@DPYSL3 | ||
}} | }} |
Latest revision as of 22:06, 15 September 2015
Short description: | p8@DPYSL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_DPYSL3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -62bp_to_NM_001387, uc003lon.1_5end |
EntrezGene: | DPYSL3 |
HGNC: | 3015 |
UniProt: | Q14195Q8IXW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 1.09e-10 | 59 |
neural cell | 1.49e-10 | 25 |
ectodermal cell | 8.86e-08 | 72 |
vascular associated smooth muscle cell | 1.40e-07 | 32 |
neuronal stem cell | 3.48e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.68e-14 | 81 |
nervous system | 6.54e-14 | 89 |
ectoderm-derived structure | 6.07e-11 | 171 |
ectoderm | 6.07e-11 | 171 |
presumptive ectoderm | 6.07e-11 | 171 |
brain | 4.65e-10 | 68 |
future brain | 4.65e-10 | 68 |
artery | 3.43e-09 | 42 |
arterial blood vessel | 3.43e-09 | 42 |
arterial system | 3.43e-09 | 42 |
neural plate | 5.47e-09 | 82 |
presumptive neural plate | 5.47e-09 | 82 |
tube | 6.66e-09 | 192 |
neural tube | 1.02e-08 | 56 |
neural rod | 1.02e-08 | 56 |
future spinal cord | 1.02e-08 | 56 |
neural keel | 1.02e-08 | 56 |
regional part of nervous system | 1.19e-08 | 53 |
regional part of brain | 1.19e-08 | 53 |
embryo | 1.74e-08 | 592 |
germ layer | 2.23e-08 | 560 |
germ layer / neural crest | 2.23e-08 | 560 |
embryonic tissue | 2.23e-08 | 560 |
presumptive structure | 2.23e-08 | 560 |
germ layer / neural crest derived structure | 2.23e-08 | 560 |
epiblast (generic) | 2.23e-08 | 560 |
neurectoderm | 4.27e-08 | 86 |
embryonic structure | 4.73e-08 | 564 |
anatomical conduit | 5.82e-08 | 240 |
developing anatomical structure | 9.60e-07 | 581 |