FFCP PHASE1:Hg19::chr19:50031252..50031285,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:50031252..50031285,+
|short_description=p1@RCN3
|description=CAGE_peak_1_at_RCN3_5end
|association_with_transcript=377bp_to_ENST00000270645,NM_020650,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57333 | |EntrezGene=57333 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21145 | |HGNC=21145 | ||
|TSSclassifier=strong | |||
|UniProt=Q96D15 | |UniProt=Q96D15 | ||
|association_with_transcript=377bp_to_ENST00000270645,NM_020650,uc002poj.2_5end | |||
|cluster_id=chr19:50031252..50031285,+ | |||
|coexpression_cluster_id=C750 | |||
|description=CAGE_peak_1_at_RCN3_5end | |||
|id=chr19:50031252..50031285,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.87e-48!180;CL:0000057!2.44e-24!75;CL:0000680!8.18e-24!57;CL:0000056!8.18e-24!57;CL:0000355!8.18e-24!57;CL:0000183!1.19e-23!59;CL:0000187!2.20e-22!54;CL:0000393!1.59e-20!60;CL:0000211!1.59e-20!60;CL:0000192!7.31e-20!42;CL:0000514!7.31e-20!42;CL:0000222!7.46e-19!119;CL:0000359!7.62e-17!32;CL:0000048!6.54e-11!430;CL:0002620!6.57e-11!23;CL:0002371!1.01e-10!591;CL:0000723!1.03e-09!436;CL:0000034!3.40e-09!444;CL:0000144!1.22e-08!625;CL:0002494!2.15e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.63e-16;32!CL:0000192;6.72e-15;43!CL:0000187;6.01e-13;55!CL:0002620;3.17e-11;23!CL:0000393;5.08e-11;61!CL:0000211;5.08e-11;61!CL:0000134;7.63e-11;55!CL:0000057;1.74e-10;73!CL:0000723;4.91e-10;61!CL:0000048;1.04e-09;58!CL:0002320;4.37e-09;188!CL:0002494;1.34e-07;16!CL:0000034;1.44e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.12e-26,76;CL:0000680,8.15e-25,58;CL:0000056,8.15e-25,58;CL:0000355,8.15e-25,58;CL:0000187,2.46e-23,55;CL:0000393,2.00e-21,61;CL:0000211,2.00e-21,61;CL:0000192,1.04e-20,43;CL:0000514,1.04e-20,43;CL:0000222,5.73e-19,121;CL:0000359,2.36e-17,32;CL:0000048,4.01e-13,427;CL:0000723,6.96e-12,433;CL:0000034,2.65e-11,441;CL:0002620,3.21e-11,23;CL:0002494,1.37e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;6.72e-15;43!CL:0000355;2.91e-13;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.96e-28!83;UBERON:0002329!7.96e-28!83;UBERON:0003077!7.96e-28!83;UBERON:0003059!7.96e-28!83;UBERON:0007282!7.96e-28!83;UBERON:0009618!7.96e-28!83;UBERON:0007285!7.96e-28!83;UBERON:0004290!1.03e-26!70;UBERON:0002049!3.15e-25!79;UBERON:0007798!3.15e-25!79;UBERON:0004872!7.89e-25!84;UBERON:0001134!3.12e-23!61;UBERON:0002036!3.12e-23!61;UBERON:0003082!3.12e-23!61;UBERON:0002385!1.11e-22!63;UBERON:0001015!1.11e-22!63;UBERON:0000383!1.11e-22!63;UBERON:0000055!2.80e-22!69;UBERON:0004535!4.99e-22!110;UBERON:0001009!5.91e-22!113;UBERON:0000486!1.40e-21!82;UBERON:0001981!2.05e-21!60;UBERON:0007500!2.05e-21!60;UBERON:0004537!2.05e-21!60;UBERON:0006965!2.05e-21!60;UBERON:0005256!1.17e-19!143;UBERON:0001637!2.31e-19!42;UBERON:0003509!2.31e-19!42;UBERON:0004572!2.31e-19!42;UBERON:0003914!1.73e-18!118;UBERON:0004573!8.54e-16!33;UBERON:0004571!8.54e-16!33;UBERON:0000490!1.90e-14!138;UBERON:0000119!5.28e-12!312;UBERON:0000483!1.62e-11!309;UBERON:0000475!4.20e-11!365;UBERON:0002100!5.17e-11!216;UBERON:0000468!5.97e-10!659;UBERON:0002199!2.45e-09!45;UBERON:0002416!2.45e-09!45;UBERON:0000477!2.55e-09!286;UBERON:0000947!7.24e-09!21;UBERON:0010191!7.24e-09!21;UBERON:0001013!2.32e-08!14;UBERON:0004111!4.98e-08!241;UBERON:0000948!6.79e-08!24;UBERON:0005498!6.79e-08!24;UBERON:0004140!6.79e-08!24;UBERON:0009881!6.79e-08!24;UBERON:0004141!6.79e-08!24;UBERON:0003084!6.79e-08!24;UBERON:0007005!6.79e-08!24;UBERON:0004139!6.79e-08!24;UBERON:0004291!6.79e-08!24;UBERON:0003102!9.99e-08!95;UBERON:0000025!1.19e-07!194;UBERON:0007100!1.25e-07!27;UBERON:0002097!1.97e-07!40;UBERON:0000481!4.10e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.72e-15;33!UBERON:0004571;8.72e-15;33!UBERON:0001637;1.48e-14;42!UBERON:0003509;1.48e-14;42!UBERON:0004572;1.48e-14;42!UBERON:0007500;7.63e-12;56!UBERON:0001981;7.63e-12;56!UBERON:0004537;7.63e-12;56!UBERON:0000055;1.46e-10;65!UBERON:0002049;2.70e-10;75!UBERON:0007798;2.70e-10;75!UBERON:0003914;2.82e-09;74!UBERON:0000947;3.88e-09;21!UBERON:0010191;3.88e-09;21!UBERON:0002384;4.55e-09;198!UBERON:0001013;1.38e-08;14!UBERON:0002385;2.03e-08;31!UBERON:0001015;2.03e-08;31!UBERON:0000383;2.03e-08;31!UBERON:0000948;2.66e-07;22!UBERON:0002204;2.95e-07;70!UBERON:0007100;4.79e-07;25 | |||
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| ||
|short_description=p1@RCN3 | |||
}} | }} |
Latest revision as of 08:03, 19 September 2015
Short description: | p1@RCN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RCN3_5end |
Coexpression cluster: | C750_Smooth_Mesenchymal_Fibroblast_Hepatic_Chondrocyte_Lens_tenocyte |
Association with transcript: | 377bp_to_ENST00000270645, NM_020650, uc002poj.2_5end |
EntrezGene: | RCN3 |
HGNC: | 21145 |
UniProt: | Q96D15 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.12e-26 | 76 |
muscle precursor cell | 8.15e-25 | 58 |
myoblast | 8.15e-25 | 58 |
multi-potent skeletal muscle stem cell | 8.15e-25 | 58 |
muscle cell | 2.46e-23 | 55 |
electrically responsive cell | 2.00e-21 | 61 |
electrically active cell | 2.00e-21 | 61 |
smooth muscle cell | 1.04e-20 | 43 |
smooth muscle myoblast | 1.04e-20 | 43 |
mesodermal cell | 5.73e-19 | 121 |
vascular associated smooth muscle cell | 2.36e-17 | 32 |
multi fate stem cell | 4.01e-13 | 427 |
somatic stem cell | 6.96e-12 | 433 |
stem cell | 2.65e-11 | 441 |
skin fibroblast | 3.21e-11 | 23 |
cardiocyte | 1.37e-07 | 16 |