FFCP PHASE1:Hg19::chr8:30242048..30242064,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11030 | |EntrezGene=11030 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19097 | |HGNC=19097 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_ENST00000287771_5end | |association_with_transcript=5bp_to_ENST00000287771_5end | ||
|cluster_id=chr8:30242048..30242064,+ | |||
|description=CAGE_peak_1_at_RBPMS_5end | |description=CAGE_peak_1_at_RBPMS_5end | ||
|id=chr8:30242048..30242064,+ | |id=chr8:30242048..30242064,+ | ||
|ontology_enrichment_celltype=CL:0000136;2.79e-07;13!CL:1000497;7.51e-07;17!CL:0002518;7.51e-07;17 | |ontology_enrichment_celltype=CL:0000055!4.63e-15!180;CL:0000183!1.21e-10!59;CL:0000187!1.04e-09!54;CL:0000393!1.21e-09!60;CL:0000211!1.21e-09!60;CL:0000680!4.18e-09!57;CL:0000056!4.18e-09!57;CL:0000355!4.18e-09!57;CL:0000192!1.68e-08!42;CL:0000514!1.68e-08!42;CL:0000057!3.44e-08!75;CL:0000222!3.14e-07!119;CL:1000497!3.51e-07!18;CL:0002518!3.51e-07!18;CL:0000136!4.80e-07!15;CL:1000449!6.98e-07!16 | ||
| | |ontology_enrichment_celltype_v019=CL:0000136;2.79e-07;13!CL:1000497;7.51e-07;17!CL:0002518;7.51e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000187,4.34e-10,55;CL:0000393,5.15e-10,61;CL:0000211,5.15e-10,61;CL:0000680,1.80e-09,58;CL:0000056,1.80e-09,58;CL:0000355,1.80e-09,58;CL:0000192,7.05e-09,43;CL:0000514,7.05e-09,43;CL:0000057,1.54e-08,76;CL:0000222,1.62e-07,121;CL:0000136,4.46e-07,15;CL:1000497,7.57e-07,17;CL:0002518,7.57e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0003104;7.89e-07;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0005172;2.57e-08;52!UBERON:0005173;2.57e-08;52!UBERON:0002113;2.73e-08;24!UBERON:0011143;2.73e-08;24!UBERON:0000489;2.94e-08;29!UBERON:0006554;4.33e-08;30!UBERON:0001008;4.33e-08;30!UBERON:0007100;8.18e-08;25!UBERON:0002417;1.20e-07;58!UBERON:0000916;1.20e-07;58!UBERON:0003103;1.26e-07;61!UBERON:0003101;1.55e-07;22!UBERON:0000079;1.55e-07;22 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.40e-25!216;UBERON:0000481!2.65e-23!347;UBERON:0005256!4.14e-23!143;UBERON:0000475!1.23e-21!365;UBERON:0003104!2.38e-20!238;UBERON:0009142!2.38e-20!238;UBERON:0003914!4.47e-16!118;UBERON:0000468!8.98e-16!659;UBERON:0003103!1.03e-15!69;UBERON:0002417!2.22e-15!61;UBERON:0000916!2.22e-15!61;UBERON:0009569!3.60e-15!113;UBERON:0000466!8.49e-15!126;UBERON:0000119!2.30e-14!312;UBERON:0000483!7.36e-14!309;UBERON:0000477!3.05e-13!286;UBERON:0005172!3.13e-13!55;UBERON:0005173!3.13e-13!55;UBERON:0003886!1.07e-12!63;UBERON:0002553!4.16e-12!70;UBERON:0004111!8.03e-12!241;UBERON:0005177!1.09e-11!107;UBERON:0000490!1.30e-11!138;UBERON:0001008!1.42e-11!45;UBERON:0006554!5.10e-11!44;UBERON:0000467!5.48e-11!625;UBERON:0000464!6.77e-11!104;UBERON:0000480!8.56e-11!626;UBERON:0002385!2.31e-10!63;UBERON:0001015!2.31e-10!63;UBERON:0000383!2.31e-10!63;UBERON:0003064!4.08e-10!37;UBERON:0000914!6.40e-10!83;UBERON:0002329!6.40e-10!83;UBERON:0003077!6.40e-10!83;UBERON:0003059!6.40e-10!83;UBERON:0007282!6.40e-10!83;UBERON:0009618!6.40e-10!83;UBERON:0007285!6.40e-10!83;UBERON:0001048!6.91e-10!168;UBERON:0001134!1.26e-09!61;UBERON:0002036!1.26e-09!61;UBERON:0003082!1.26e-09!61;UBERON:0002113!1.51e-09!27;UBERON:0003918!1.51e-09!27;UBERON:0005095!1.51e-09!27;UBERON:0007687!1.51e-09!27;UBERON:0004290!1.72e-09!70;UBERON:0000489!1.77e-09!32;UBERON:0004876!1.01e-08!20;UBERON:0000486!1.21e-08!82;UBERON:0000025!1.78e-08!194;UBERON:0000922!4.78e-08!612;UBERON:0000058!7.11e-08!26;UBERON:0007100!7.14e-08!27;UBERON:0000080!7.79e-08!18;UBERON:0002120!7.79e-08!18;UBERON:0004875!7.79e-08!18;UBERON:0005721!7.79e-08!18;UBERON:0005754!7.79e-08!18;UBERON:0007297!7.79e-08!18;UBERON:0003887!1.29e-07!21;UBERON:0001007!1.61e-07!155;UBERON:0001555!1.61e-07!155;UBERON:0007026!1.61e-07!155;UBERON:0003101!1.67e-07!22;UBERON:0000079!1.67e-07!22;UBERON:0004872!2.11e-07!84;UBERON:0002323!2.29e-07!46;UBERON:0004119!2.52e-07!169;UBERON:0000925!2.52e-07!169;UBERON:0006595!2.52e-07!169;UBERON:0004458!2.53e-07!49;UBERON:0006555!2.79e-07!17;UBERON:0005103!2.79e-07!17;UBERON:0000083!2.79e-07!17;UBERON:0009201!2.79e-07!17;UBERON:0004819!2.79e-07!17;UBERON:0006553!2.79e-07!17;UBERON:0003074!2.79e-07!17;UBERON:0003060!2.79e-07!17;UBERON:0000062!3.24e-07!511;UBERON:0003929!6.82e-07!54;UBERON:0004211!6.98e-07!16;UBERON:0001285!6.98e-07!16;UBERON:0007684!6.98e-07!16;UBERON:0003220!6.98e-07!16;UBERON:0004208!6.98e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0005172;2.57e-08;52!UBERON:0005173;2.57e-08;52!UBERON:0002113;2.73e-08;24!UBERON:0011143;2.73e-08;24!UBERON:0000489;2.94e-08;29!UBERON:0006554;4.33e-08;30!UBERON:0001008;4.33e-08;30!UBERON:0007100;8.18e-08;25!UBERON:0002417;1.20e-07;58!UBERON:0000916;1.20e-07;58!UBERON:0003103;1.26e-07;61!UBERON:0003101;1.55e-07;22!UBERON:0000079;1.55e-07;22 | |||
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| ||
|short_description=p1@RBPMS | |short_description=p1@RBPMS | ||
}} | }} |
Latest revision as of 23:15, 17 September 2015
Short description: | p1@RBPMS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RBPMS_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000287771_5end |
EntrezGene: | RBPMS |
HGNC: | 19097 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 4.34e-10 | 55 |
electrically responsive cell | 5.15e-10 | 61 |
electrically active cell | 5.15e-10 | 61 |
muscle precursor cell | 1.80e-09 | 58 |
myoblast | 1.80e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.80e-09 | 58 |
smooth muscle cell | 7.05e-09 | 43 |
smooth muscle myoblast | 7.05e-09 | 43 |
fibroblast | 1.54e-08 | 76 |
mesodermal cell | 1.62e-07 | 121 |
fat cell | 4.46e-07 | 15 |
kidney cell | 7.57e-07 | 17 |
kidney epithelial cell | 7.57e-07 | 17 |