FFCP PHASE1:Hg19::chr6:123101428..123101450,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:123101428..123101450,+ | |||
|coexpression_cluster_id=C919 | |coexpression_cluster_id=C919 | ||
|description=CAGE_peak_at_chr6:123101428..123101450,+ | |description=CAGE_peak_at_chr6:123101428..123101450,+ | ||
|id=chr6:123101428..123101450,+ | |id=chr6:123101428..123101450,+ | ||
|ontology_enrichment_celltype=CL:0002605;2.98e-32;3!CL:0002319;1.49e-18;25!CL:0000540;1.28e-16;6!CL:0000404;1.28e-16;6!CL:0000128;3.32e-14;7!CL:0000126;3.32e-14;7!CL:0000127;3.32e-14;7 | |ontology_enrichment_celltype=CL:0002605!8.48e-12!3;CL:0000047!5.00e-11!8;CL:0000540!1.03e-09!6;CL:0000031!1.03e-09!6;CL:0000404!1.03e-09!6;CL:0002319!4.42e-09!25;CL:0000128!2.01e-08!7;CL:0000126!2.01e-08!7;CL:0000127!2.01e-08!7;CL:0002453!2.01e-08!7 | ||
| | |ontology_enrichment_celltype_v019=CL:0002605;2.98e-32;3!CL:0002319;1.49e-18;25!CL:0000540;1.28e-16;6!CL:0000404;1.28e-16;6!CL:0000128;3.32e-14;7!CL:0000126;3.32e-14;7!CL:0000127;3.32e-14;7 | ||
|ontology_enrichment_disease=DOID:171;4.81e-10;10 | |ontology_enrichment_celltype_v019_2=CL:0002605,2.68e-32,3;CL:0000047,1.99e-21,8;CL:0002319,1.53e-18,25;CL:0000540,1.38e-16,6;CL:0000031,1.38e-16,6;CL:0000404,1.38e-16,6;CL:0000128,3.17e-14,7;CL:0000126,3.17e-14,7;CL:0000127,3.17e-14,7;CL:0002453,3.17e-14,7;CL:0000133,3.62e-10,59;CL:0000221,3.25e-08,72 | ||
|ontology_enrichment_uberon=UBERON:0000956;1.73e-31;25!UBERON:0000203;1.73e-31;25!UBERON:0001871;6.07e-24;6!UBERON:0003528;2.95e-22;34!UBERON:0002020;2.95e-22;34!UBERON:0002791;8.80e-22;32!UBERON:0001869;1.04e-21;32!UBERON:0002771;1.26e-21;2!UBERON:0001893;1.47e-20;34!UBERON:0001950;1.36e-17;20!UBERON:0002619;4.93e-16;22!UBERON:0000073;6.74e-13;53!UBERON:0002616;6.74e-13;53!UBERON:0002780;3.36e-12;41!UBERON:0001890;3.36e-12;41!UBERON:0003112;1.39e-11;1!UBERON:0011158;1.39e-11;1!UBERON:0003128;1.39e-11;1!UBERON:0001703;1.39e-11;1!UBERON:0002241;1.39e-11;1!UBERON:0002346;1.68e-11;4!UBERON:0000923;1.68e-11;4!UBERON:0010316;1.68e-11;4!UBERON:0005291;1.68e-11;4!UBERON:0002050;2.22e-09;5!UBERON:0005423;2.22e-09;5!UBERON:0000955;3.68e-09;68!UBERON:0001017;8.23e-09;75!UBERON:0001016;1.00e-08;83!UBERON:0000200;7.85e-08;6!UBERON:0000922;1.34e-07;49 | |ontology_enrichment_development_v019=CL:0000031;1.28e-16;6!CL:0000133;1.19e-07;59 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;4.81e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.81e-10,10 | |||
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|short_description=p@chr6:123101428..123101450,+ | |short_description=p@chr6:123101428..123101450,+ | ||
}} | }} |
Latest revision as of 18:57, 30 July 2015
Short description: | p@chr6:123101428..123101450, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:123101428..123101450, + |
Coexpression cluster: | C919_Neurons_Neural_parietal_Astrocyte_duodenum_occipital_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.68e-32 | 3 |
neuronal stem cell | 1.99e-21 | 8 |
neural cell | 1.53e-18 | 25 |
neuron | 1.38e-16 | 6 |
neuroblast | 1.38e-16 | 6 |
electrically signaling cell | 1.38e-16 | 6 |
oligodendrocyte | 3.17e-14 | 7 |
macroglial cell | 3.17e-14 | 7 |
astrocyte | 3.17e-14 | 7 |
oligodendrocyte precursor cell | 3.17e-14 | 7 |
neurectodermal cell | 3.62e-10 | 59 |
ectodermal cell | 3.25e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.81e-10 | 10 |