FFCP PHASE1:Hg19::chrX:122318250..122318274,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2892 | |EntrezGene=2892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4573 | |HGNC=4573 | ||
|TSSclassifier=strong | |||
|UniProt=E7ESZ0,F5H470 | |UniProt=E7ESZ0,F5H470 | ||
|association_with_transcript=26bp_to_ENST00000335161,ENST00000542149_5end | |association_with_transcript=26bp_to_ENST00000335161,ENST00000542149_5end | ||
|cluster_id=chrX:122318250..122318274,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_6_at_GRIA3_5end | |description=CAGE_peak_6_at_GRIA3_5end | ||
|id=chrX:122318250..122318274,+ | |id=chrX:122318250..122318274,+ | ||
|ontology_enrichment_celltype=CL:0000057!6.93e-10!75;CL:0002620!3.20e-09!23;CL:0000055!2.32e-08!180 | |ontology_enrichment_celltype=CL:0000057!6.93e-10!75;CL:0002620!3.20e-09!23;CL:0000055!2.32e-08!180 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.46e-18;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.50e-18,23;CL:0000057,2.67e-07,76 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.94e-08;82!UBERON:0010122;4.42e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;6.27e-13;5!DOID:450;6.27e-13;5!DOID:66;6.27e-13;5!DOID:423;6.27e-13;5!DOID:0080000;6.27e-13;5!DOID:11722;6.27e-13;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.47e-13,5;DOID:450,5.47e-13,5;DOID:66,5.47e-13,5;DOID:423,5.47e-13,5;DOID:0080000,5.47e-13,5;DOID:11722,5.47e-13,5 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.21e-37!57;UBERON:0005068!1.21e-37!57;UBERON:0006241!1.21e-37!57;UBERON:0007135!1.21e-37!57;UBERON:0002780!2.36e-37!41;UBERON:0001890!2.36e-37!41;UBERON:0006240!2.36e-37!41;UBERON:0003080!4.35e-36!42;UBERON:0001017!1.68e-35!82;UBERON:0005743!5.44e-34!86;UBERON:0000073!1.08e-33!94;UBERON:0001016!1.08e-33!94;UBERON:0001893!1.40e-33!34;UBERON:0002791!1.57e-32!33;UBERON:0001869!2.01e-32!32;UBERON:0002616!6.05e-32!59;UBERON:0002020!3.95e-31!34;UBERON:0003528!3.95e-31!34;UBERON:0000955!1.11e-28!69;UBERON:0006238!1.11e-28!69;UBERON:0000956!6.72e-25!25;UBERON:0000203!6.72e-25!25;UBERON:0003075!8.99e-25!86;UBERON:0007284!8.99e-25!86;UBERON:0004121!5.83e-24!169;UBERON:0002619!3.56e-23!22;UBERON:0002346!8.58e-23!90;UBERON:0000924!9.29e-23!173;UBERON:0006601!9.29e-23!173;UBERON:0003056!3.65e-21!61;UBERON:0000033!4.02e-21!123;UBERON:0001950!6.16e-21!20;UBERON:0007023!8.96e-21!115;UBERON:0000153!4.10e-19!129;UBERON:0007811!4.10e-19!129;UBERON:0000475!7.74e-15!365;UBERON:0002420!1.15e-10!9;UBERON:0007245!1.15e-10!9;UBERON:0010009!1.15e-10!9;UBERON:0010011!1.15e-10!9;UBERON:0000454!1.15e-10!9;UBERON:0000025!1.24e-10!194;UBERON:0002199!2.12e-09!45;UBERON:0002416!2.12e-09!45;UBERON:0004111!1.46e-08!241;UBERON:0009663!2.29e-08!7;UBERON:0000200!5.29e-08!6;UBERON:0001871!9.72e-08!7;UBERON:0002308!1.03e-07!9;UBERON:0000125!1.03e-07!9;UBERON:0002097!1.27e-07!40;UBERON:0000349!2.90e-07!5;UBERON:0003102!4.53e-07!95;UBERON:0000467!9.76e-07!625 | |ontology_enrichment_uberon=UBERON:0001049!1.21e-37!57;UBERON:0005068!1.21e-37!57;UBERON:0006241!1.21e-37!57;UBERON:0007135!1.21e-37!57;UBERON:0002780!2.36e-37!41;UBERON:0001890!2.36e-37!41;UBERON:0006240!2.36e-37!41;UBERON:0003080!4.35e-36!42;UBERON:0001017!1.68e-35!82;UBERON:0005743!5.44e-34!86;UBERON:0000073!1.08e-33!94;UBERON:0001016!1.08e-33!94;UBERON:0001893!1.40e-33!34;UBERON:0002791!1.57e-32!33;UBERON:0001869!2.01e-32!32;UBERON:0002616!6.05e-32!59;UBERON:0002020!3.95e-31!34;UBERON:0003528!3.95e-31!34;UBERON:0000955!1.11e-28!69;UBERON:0006238!1.11e-28!69;UBERON:0000956!6.72e-25!25;UBERON:0000203!6.72e-25!25;UBERON:0003075!8.99e-25!86;UBERON:0007284!8.99e-25!86;UBERON:0004121!5.83e-24!169;UBERON:0002619!3.56e-23!22;UBERON:0002346!8.58e-23!90;UBERON:0000924!9.29e-23!173;UBERON:0006601!9.29e-23!173;UBERON:0003056!3.65e-21!61;UBERON:0000033!4.02e-21!123;UBERON:0001950!6.16e-21!20;UBERON:0007023!8.96e-21!115;UBERON:0000153!4.10e-19!129;UBERON:0007811!4.10e-19!129;UBERON:0000475!7.74e-15!365;UBERON:0002420!1.15e-10!9;UBERON:0007245!1.15e-10!9;UBERON:0010009!1.15e-10!9;UBERON:0010011!1.15e-10!9;UBERON:0000454!1.15e-10!9;UBERON:0000025!1.24e-10!194;UBERON:0002199!2.12e-09!45;UBERON:0002416!2.12e-09!45;UBERON:0004111!1.46e-08!241;UBERON:0009663!2.29e-08!7;UBERON:0000200!5.29e-08!6;UBERON:0001871!9.72e-08!7;UBERON:0002308!1.03e-07!9;UBERON:0000125!1.03e-07!9;UBERON:0002097!1.27e-07!40;UBERON:0000349!2.90e-07!5;UBERON:0003102!4.53e-07!95;UBERON:0000467!9.76e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.81e-53;32!UBERON:0002791;4.41e-50;32!UBERON:0002619;1.07e-48;22!UBERON:0001893;6.25e-48;34!UBERON:0003528;4.74e-45;34!UBERON:0002020;4.74e-45;34!UBERON:0001950;1.71e-43;20!UBERON:0002780;1.48e-42;41!UBERON:0001890;1.48e-42;41!UBERON:0000956;2.39e-42;25!UBERON:0000203;2.39e-42;25!UBERON:0000073;1.22e-25;53!UBERON:0002616;1.22e-25;53!UBERON:0001017;1.16e-19;75!UBERON:0002420;2.44e-19;9!UBERON:0007245;2.44e-19;9!UBERON:0010009;2.44e-19;9!UBERON:0010011;2.44e-19;9!UBERON:0000454;2.44e-19;9!UBERON:0000955;2.19e-17;68!UBERON:0000200;1.38e-16;6!UBERON:0000349;7.64e-15;5!UBERON:0001871;2.07e-14;6!UBERON:0001016;2.93e-14;83!UBERON:0009663;4.21e-14;7!UBERON:0002021;2.78e-13;5!UBERON:0000369;2.48e-12;4!UBERON:0002435;2.48e-12;4!UBERON:0000204;2.48e-12;4!UBERON:0000125;8.80e-11;9!UBERON:0002308;8.80e-11;9!UBERON:0005383;9.51e-10;3!UBERON:0005382;9.51e-10;3!UBERON:0001870;2.35e-09;3!UBERON:0002199;2.54e-09;46!UBERON:0002416;2.54e-09;46!UBERON:0002097;3.00e-09;41!UBERON:0001872;4.48e-09;5!UBERON:0001873;4.42e-07;2!UBERON:0001876;4.55e-07;2!UBERON:0001954;7.45e-07;2!UBERON:0003022;7.45e-07;2!UBERON:0002421;7.45e-07;2!UBERON:0002600;7.45e-07;2!UBERON:0002771;7.99e-07;2!UBERON:0007023;9.56e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.21e-59,41;UBERON:0001890,1.21e-59,41;UBERON:0003080,1.21e-59,41;UBERON:0006240,1.21e-59,41;UBERON:0001869,1.93e-59,32;UBERON:0001893,1.48e-55,34;UBERON:0002791,4.54e-55,32;UBERON:0003528,1.88e-51,34;UBERON:0002020,1.88e-51,34;UBERON:0002619,9.93e-49,22;UBERON:0000073,4.47e-47,53;UBERON:0002616,4.47e-47,53;UBERON:0001049,7.39e-47,56;UBERON:0005068,7.39e-47,56;UBERON:0006241,7.39e-47,56;UBERON:0007135,7.39e-47,56;UBERON:0001950,1.58e-43,20;UBERON:0000956,2.24e-42,25;UBERON:0000203,2.24e-42,25;UBERON:0001017,3.28e-42,81;UBERON:0003056,5.93e-40,61;UBERON:0001016,3.74e-39,89;UBERON:0000955,3.78e-39,68;UBERON:0006238,3.78e-39,68;UBERON:0003075,5.29e-33,82;UBERON:0007284,5.29e-33,82;UBERON:0002346,5.20e-31,86;UBERON:0010371,1.13e-25,104;UBERON:0010314,1.84e-19,132;UBERON:0002420,3.43e-19,9;UBERON:0007245,3.43e-19,9;UBERON:0010009,3.43e-19,9;UBERON:0010011,3.43e-19,9;UBERON:0000454,3.43e-19,9;UBERON:0007023,7.22e-19,114;UBERON:0004121,1.13e-18,171;UBERON:0000924,1.13e-18,171;UBERON:0006601,1.13e-18,171;UBERON:0000200,1.68e-16,6;UBERON:0000349,8.59e-15,5;UBERON:0001871,2.06e-14,6;UBERON:0009663,5.62e-14,7;UBERON:0002021,2.10e-13,5;UBERON:0002199,2.62e-13,46;UBERON:0002416,2.62e-13,46;UBERON:0000369,2.56e-12,4;UBERON:0002435,2.56e-12,4;UBERON:0000204,2.56e-12,4;UBERON:0010082,2.56e-12,4;UBERON:0002097,6.37e-12,41;UBERON:0011216,1.24e-11,223;UBERON:0000125,1.10e-10,9;UBERON:0002308,1.10e-10,9;UBERON:0005383,9.16e-10,3;UBERON:0005382,9.16e-10,3;UBERON:0001870,2.93e-09,3;UBERON:0001872,4.36e-09,5;UBERON:0000025,9.81e-09,192;UBERON:0001873,4.49e-07,2;UBERON:0010122,4.49e-07,2;UBERON:0001876,4.76e-07,2;UBERON:0001954,7.47e-07,2;UBERON:0003022,7.47e-07,2;UBERON:0002421,7.47e-07,2;UBERON:0002600,7.47e-07,2;UBERON:0002771,9.59e-07,2 | |||
|phase1_expression=0.908391896352783,0.214100523890983,0.281908808191942,1.0007329835313,0,0,2.53299878168311,0.631719873426831,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0.204000691244253,0,0.85870796139317,0.410623275218653,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.579386075843295,4.7717156823066,1.45990461090791,0,0,0,0.392937226493138,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.926864265692532,0.573673241497627,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0.206651562351531,3.56400857184616,0,0,0,0,0,0.554128230968366,0.438977620880838,0.30648779579902,0.600952235626387,0.113432183160021,1.97328599257748,1.49490172172997,2.11931901159562,3.30100205692843,3.09157587715317,2.31876486041066,1.11670113798954,3.71307930930786,1.07180705677318,1.00973509697646,1.93304787148829,1.45481451136931,4.26011511019937,1.71278566986988,0.508681776931463,0,0,0,0,0,0,0,0,0.36497735907583,4.69348596989448,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,1.74306691720059,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0.821905290201534,0.895304816199478,0,0,0,0,1.52456774533478,0,1.54657762555539,0.502548796003046,2.55175500661265,0,0,0,0,0,0,0,1.07057393278297,0.630809660135739,0,0,0,0,0.664225598535437,0,0.60818530127658,0,0,0,0,0,0,0,0,0.248107807818777,2.91577749247319,0,0.384417447767103,2.04682899626681,0.321707842287215,0,0.154209693802656,1.59805552781814,0.492762936082855,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0.356128142586949,0.330569830721956,0,1.91419068741876,0.10115778085555,0,2.20368642781448,0.6970372701606,0,0,0,1.29726953372744,0.572499546967965,0,0,0,0,0,0,0,0,0,0,0.606547444719948,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0.811641507850816,0.92947049429925,0.281695602532241,0,0,0.35667105148125,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.500547425135725,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,11.9297717731956,5.20476840718897,0,0,0,0.19924798825107,0,0,4.70435939509912,0,1.24415835064723,0,0,0,0,0,0,0.969332746095218,3.71072392647405,0,0,0,0,0,0,0,0,0.291604613383254,0,6.20018970069687,7.47697919477529,0,0.442317039724898,0,2.4132393686937,0,0,0.230850775511391,0.113942055847001,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0.802577647298789,3.04543779442941,0,0,0,0,0,2.75465485467441,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,5.57135004411733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,1.09524303113594,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,8.74752658790234,3.40508515278939,0.321506296930038,0.275078873194468,0,0,0,5.40671054256419,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,1.62899880526114,0,0.979762080328227,0,0,0.511164065356265,0,0,0,0.517131825446202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5188863395708,6.34536577490208,2.003054891304,1.14681839138014,0.221858103073705,0.869349641179368,0,0,0,0,0,0,0,0.597019211547496,0.934853239388898,0.554805861502613,0,0,0,0,0.302461847526478,0.15543720058278,0.295710299979268,0.63718706865481,0.449803112163605,0.310525913752519,0,0.265841714557995,0,0.300515217994437,0.380805212168795,0,0.181848659202559,0.214821114084977,0,1.19428766609585,0,1.03018711554838,1.34699795506368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04168559533808,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0.511577485214607,0.646948868380091,0,0,0,0,0,0,0.318004350653419,0,0,1.05802783107205,0,4.23912885636633,5.6678630530234,1.59633859057151,3.28186182785208,1.51243017733031,3.52701987567511,4.35984243205998,2.85538840518309,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,2.90411613859097,3.12431239445539,2.48024155801421,3.6781169912466,0.546974809018219,0,0,0,0,2.67850917939143,0.336283722218824,0,0.227662191351298,0.0887023701626388,0,0,0.679697329768317,3.485956998831,0,0.111231401892069,0.078493092850514,5.81327682689207,0,0,0,0,0.285906176706625,0,0,0,0,0.62164849248911,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.785233868459781,0.594092800654172,1.2679671827502,0.339854229375634,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,3.67154047030939,2.61810414204226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| ||
|short_description=p6@GRIA3 | |short_description=p6@GRIA3 | ||
}} | }} |
Latest revision as of 07:18, 19 September 2015
Short description: | p6@GRIA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GRIA3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 26bp_to_ENST00000335161, ENST00000542149_5end |
EntrezGene: | GRIA3 |
HGNC: | 4573 |
UniProt: | E7ESZ0F5H470 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.50e-18 | 23 |
fibroblast | 2.67e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.47e-13 | 5 |
myotonic disease | 5.47e-13 | 5 |
muscle tissue disease | 5.47e-13 | 5 |
myopathy | 5.47e-13 | 5 |
muscular disease | 5.47e-13 | 5 |
myotonic dystrophy | 5.47e-13 | 5 |