FFCP PHASE1:Hg19::chr2:63277978..63277995,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5013 | |EntrezGene=5013 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8521 | |HGNC=8521 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000476383_5end | |association_with_transcript=0bp_to_ENST00000476383_5end | ||
|cluster_id=chr2:63277978..63277995,+ | |||
|coexpression_cluster_id=C2590 | |coexpression_cluster_id=C2590 | ||
|description=CAGE_peak_2_at_OTX1_5end | |description=CAGE_peak_2_at_OTX1_5end | ||
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|ontology_enrichment_celltype=CL:0000066!2.27e-20!254;CL:0000223!4.86e-09!59;CL:0002076!3.38e-08!43 | |ontology_enrichment_celltype=CL:0000066!2.27e-20!254;CL:0000223!4.86e-09!59;CL:0002076!3.38e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0002077;1.01e-07;34!CL:0000064;2.73e-07;3!CL:0000067;2.73e-07;3!CL:0005012;2.73e-07;3!CL:0002304;2.73e-07;3!CL:0002605;5.05e-07;3!CL:0000307;9.21e-07;3 | |ontology_enrichment_celltype_v019=CL:0002077;1.01e-07;34!CL:0000064;2.73e-07;3!CL:0000067;2.73e-07;3!CL:0005012;2.73e-07;3!CL:0002304;2.73e-07;3!CL:0002605;5.05e-07;3!CL:0000307;9.21e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.48e-08,72;CL:0002077,5.63e-08,34;CL:0000066,8.44e-08,253;CL:0000064,2.70e-07,3;CL:0000067,2.70e-07,3;CL:0005012,2.70e-07,3;CL:0002304,2.70e-07,3;CL:0002605,5.20e-07,3;CL:0000068,8.95e-07,3;CL:0000069,8.95e-07,3;CL:0000307,8.95e-07,3;CL:0000377,8.95e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;9.21e-07;3 | |ontology_enrichment_development_v019=CL:0000377;9.21e-07;3 | ||
|ontology_enrichment_disease=DOID:0050687!4.88e-27!143;DOID:162!9.34e-26!235;DOID:14566!2.83e-25!239;DOID:305!1.09e-24!106;DOID:299!1.10e-08!25;DOID:0050686!6.89e-08!137;DOID:7!2.24e-07!39 | |ontology_enrichment_disease=DOID:0050687!4.88e-27!143;DOID:162!9.34e-26!235;DOID:14566!2.83e-25!239;DOID:305!1.09e-24!106;DOID:299!1.10e-08!25;DOID:0050686!6.89e-08!137;DOID:7!2.24e-07!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000020;6.43e-19;23!UBERON:0001032;6.32e-18;24!UBERON:0004456;6.32e-18;24!UBERON:0000970;2.68e-17;20!UBERON:0007625;3.59e-17;11!UBERON:0002104;2.83e-16;21!UBERON:0000019;9.63e-16;19!UBERON:0000047;9.63e-16;19!UBERON:0004088;9.63e-16;19!UBERON:0010230;9.63e-16;19!UBERON:0000956;1.68e-15;25!UBERON:0000203;1.68e-15;25!UBERON:0001456;6.95e-14;21!UBERON:0001893;1.57e-13;34!UBERON:0002791;2.98e-13;32!UBERON:0001869;2.98e-13;32!UBERON:0003528;4.33e-12;34!UBERON:0002020;4.33e-12;34!UBERON:0010371;6.75e-12;31!UBERON:0002619;2.46e-11;22!UBERON:0002780;3.90e-11;41!UBERON:0001890;3.90e-11;41!UBERON:0001801;4.95e-11;14!UBERON:0001950;6.44e-11;20!UBERON:0000488;3.84e-09;4!UBERON:0001871;1.56e-08;6!UBERON:0001778;2.73e-07;3!UBERON:0001775;2.73e-07;3!UBERON:0000073;2.79e-07;53!UBERON:0002616;2.79e-07;53!UBERON:0003126;4.93e-07;7!UBERON:0001005;4.93e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0000020;6.43e-19;23!UBERON:0001032;6.32e-18;24!UBERON:0004456;6.32e-18;24!UBERON:0000970;2.68e-17;20!UBERON:0007625;3.59e-17;11!UBERON:0002104;2.83e-16;21!UBERON:0000019;9.63e-16;19!UBERON:0000047;9.63e-16;19!UBERON:0004088;9.63e-16;19!UBERON:0010230;9.63e-16;19!UBERON:0000956;1.68e-15;25!UBERON:0000203;1.68e-15;25!UBERON:0001456;6.95e-14;21!UBERON:0001893;1.57e-13;34!UBERON:0002791;2.98e-13;32!UBERON:0001869;2.98e-13;32!UBERON:0003528;4.33e-12;34!UBERON:0002020;4.33e-12;34!UBERON:0010371;6.75e-12;31!UBERON:0002619;2.46e-11;22!UBERON:0002780;3.90e-11;41!UBERON:0001890;3.90e-11;41!UBERON:0001801;4.95e-11;14!UBERON:0001950;6.44e-11;20!UBERON:0000488;3.84e-09;4!UBERON:0001871;1.56e-08;6!UBERON:0001778;2.73e-07;3!UBERON:0001775;2.73e-07;3!UBERON:0000073;2.79e-07;53!UBERON:0002616;2.79e-07;53!UBERON:0003126;4.93e-07;7!UBERON:0001005;4.93e-07;7 | ||
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| ||
|short_description=p2@OTX1 | |short_description=p2@OTX1 | ||
}} | }} |
Latest revision as of 22:21, 17 September 2015
Short description: | p2@OTX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OTX1_5end |
Coexpression cluster: | C2590_Neural_acute_Corneal_Neurons_Astrocyte_anaplastic_Ciliary |
Association with transcript: | 0bp_to_ENST00000476383_5end |
EntrezGene: | OTX1 |
HGNC: | 8521 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.48e-08 | 72 |
ecto-epithelial cell | 5.63e-08 | 34 |
epithelial cell | 8.44e-08 | 253 |
ciliated cell | 2.70e-07 | 3 |
ciliated epithelial cell | 2.70e-07 | 3 |
multi-ciliated epithelial cell | 2.70e-07 | 3 |
non-pigmented ciliary epithelial cell | 2.70e-07 | 3 |
astrocyte of the cerebral cortex | 5.20e-07 | 3 |
duct epithelial cell | 8.95e-07 | 3 |
branched duct epithelial cell | 8.95e-07 | 3 |
tracheal epithelial cell | 8.95e-07 | 3 |
tracheoblast | 8.95e-07 | 3 |