FFCP PHASE1:Hg19::chr1:21616690..21616719,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:21616690..21616719,-
|short_description=p4@ECE1
|description=CAGE_peak_4_at_ECE1_5end
|association_with_transcript=30bp_to_ENST00000264205_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1889 | |EntrezGene=1889 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3146 | |HGNC=3146 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENST00000264205_5end | |||
|cluster_id=chr1:21616690..21616719,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_ECE1_5end | |||
|id=chr1:21616690..21616719,- | |||
|ontology_enrichment_celltype=CL:0002057!3.29e-24!42;CL:0000860!3.99e-21!45;CL:0000766!5.97e-16!76;CL:0002194!4.53e-14!63;CL:0000576!4.53e-14!63;CL:0000040!4.53e-14!63;CL:0000559!4.53e-14!63;CL:0002009!1.52e-13!65;CL:0002371!8.57e-13!591;CL:0000048!1.04e-11!430;CL:0000359!3.44e-11!32;CL:0000557!4.51e-11!71;CL:0000839!7.80e-11!70;CL:0000222!7.85e-11!119;CL:0000723!1.12e-10!436;CL:0000192!5.10e-10!42;CL:0000514!5.10e-10!42;CL:0000034!2.12e-09!444;CL:0000144!2.81e-09!625;CL:0000183!1.12e-08!59;CL:0000057!1.72e-08!75;CL:0002320!1.12e-07!365;CL:0000680!1.63e-07!57;CL:0000056!1.63e-07!57;CL:0000355!1.63e-07!57;CL:0000187!2.72e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.53e-20;33!CL:0002057;5.53e-20;33!CL:0000473;5.85e-14;39!CL:0000234;5.85e-14;39!CL:0000576;7.44e-12;48!CL:0000359;1.94e-11;32!CL:0000766;3.55e-08;69!CL:0000192;1.03e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.12e-25,42;CL:0002057,2.12e-25,42;CL:0000473,1.28e-21,48;CL:0000234,1.28e-21,48;CL:0000766,1.02e-17,72;CL:0002194,2.28e-16,59;CL:0000576,2.28e-16,59;CL:0000040,2.28e-16,59;CL:0000559,2.28e-16,59;CL:0000048,1.29e-15,427;CL:0002009,1.74e-15,61;CL:0000723,1.76e-14,433;CL:0000034,4.06e-13,441;CL:0000839,2.27e-12,66;CL:0000557,2.80e-12,67;CL:0000359,1.08e-11,32;CL:0000222,1.11e-10,121;CL:0002320,1.69e-10,361;CL:0000192,3.98e-10,43;CL:0000514,3.98e-10,43;CL:0000134,3.02e-09,354;CL:0000057,9.47e-09,76;CL:0000680,1.91e-07,58;CL:0000056,1.91e-07,58;CL:0000355,1.91e-07,58;CL:0000187,3.30e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002057;9.18e-19;42!CL:0000514;1.03e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!5.45e-35!216;UBERON:0001009!1.22e-27!113;UBERON:0004535!1.36e-27!110;UBERON:0000926!1.58e-22!448;UBERON:0004120!1.58e-22!448;UBERON:0006603!1.58e-22!448;UBERON:0002049!4.47e-21!79;UBERON:0007798!4.47e-21!79;UBERON:0004872!1.90e-20!84;UBERON:0000055!2.52e-20!69;UBERON:0001981!1.14e-18!60;UBERON:0007500!1.14e-18!60;UBERON:0004537!1.14e-18!60;UBERON:0006965!1.14e-18!60;UBERON:0001637!7.90e-17!42;UBERON:0003509!7.90e-17!42;UBERON:0004572!7.90e-17!42;UBERON:0000480!2.51e-15!626;UBERON:0000467!3.53e-15!625;UBERON:0000468!3.54e-15!659;UBERON:0002193!8.86e-15!112;UBERON:0002204!1.50e-13!167;UBERON:0004573!2.73e-13!33;UBERON:0004571!2.73e-13!33;UBERON:0002390!7.21e-13!102;UBERON:0003061!7.21e-13!102;UBERON:0003914!3.44e-12!118;UBERON:0002371!6.50e-10!80;UBERON:0002050!1.85e-09!605;UBERON:0005423!1.85e-09!605;UBERON:0000923!2.59e-09!604;UBERON:0005291!2.59e-09!604;UBERON:0006598!2.59e-09!604;UBERON:0002532!2.59e-09!604;UBERON:0000947!4.56e-09!21;UBERON:0010191!4.56e-09!21;UBERON:0000479!5.26e-09!787;UBERON:0000922!1.52e-08!612;UBERON:0001474!4.99e-08!86;UBERON:0002405!8.06e-08!115;UBERON:0004765!2.00e-07!101;UBERON:0001434!2.00e-07!101;UBERON:0002384!5.85e-07!375;UBERON:0001134!7.44e-07!61;UBERON:0002036!7.44e-07!61;UBERON:0003082!7.44e-07!61;UBERON:0004290!7.61e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.18e-13;42!UBERON:0003509;1.18e-13;42!UBERON:0004572;1.18e-13;42!UBERON:0004573;3.82e-13;33!UBERON:0004571;3.82e-13;33!UBERON:0007500;1.47e-10;56!UBERON:0001981;1.47e-10;56!UBERON:0004537;1.47e-10;56!UBERON:0000055;3.05e-10;65!UBERON:0000947;1.39e-09;21!UBERON:0010191;1.39e-09;21!UBERON:0002049;3.32e-09;75!UBERON:0007798;3.32e-09;75!UBERON:0004535;1.55e-08;109!UBERON:0001009;6.09e-08;112!UBERON:0003914;3.60e-07;74 | |||
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| ||
|short_description=p4@ECE1 | |||
}} | }} |
Latest revision as of 02:54, 25 September 2015
Short description: | p4@ECE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ECE1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 30bp_to_ENST00000264205_5end |
EntrezGene: | ECE1 |
HGNC: | 3146 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.12e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.12e-25 | 42 |
defensive cell | 1.28e-21 | 48 |
phagocyte | 1.28e-21 | 48 |
myeloid leukocyte | 1.02e-17 | 72 |
monopoietic cell | 2.28e-16 | 59 |
monocyte | 2.28e-16 | 59 |
monoblast | 2.28e-16 | 59 |
promonocyte | 2.28e-16 | 59 |
multi fate stem cell | 1.29e-15 | 427 |
macrophage dendritic cell progenitor | 1.74e-15 | 61 |
somatic stem cell | 1.76e-14 | 433 |
stem cell | 4.06e-13 | 441 |
myeloid lineage restricted progenitor cell | 2.27e-12 | 66 |
granulocyte monocyte progenitor cell | 2.80e-12 | 67 |
vascular associated smooth muscle cell | 1.08e-11 | 32 |
mesodermal cell | 1.11e-10 | 121 |
connective tissue cell | 1.69e-10 | 361 |
smooth muscle cell | 3.98e-10 | 43 |
smooth muscle myoblast | 3.98e-10 | 43 |
mesenchymal cell | 3.02e-09 | 354 |
fibroblast | 9.47e-09 | 76 |
muscle precursor cell | 1.91e-07 | 58 |
myoblast | 1.91e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.91e-07 | 58 |
muscle cell | 3.30e-07 | 55 |