FFCP PHASE1:Hg19::chr6:3224844..3224889,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:3224844..3224889,- | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_at_chr6:3224844..3224889,- | |description=CAGE_peak_at_chr6:3224844..3224889,- | ||
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|ontology_enrichment_celltype=CL:0002319!3.76e-12!25;CL:0000047!7.95e-12!8;CL:0000133!4.56e-10!59;CL:0000540!9.66e-10!6;CL:0000031!9.66e-10!6;CL:0000404!9.66e-10!6;CL:0000128!1.22e-07!7;CL:0000126!1.22e-07!7;CL:0000127!1.22e-07!7;CL:0002453!1.22e-07!7;CL:0002322!1.42e-07!5;CL:0000221!3.58e-07!71 | |ontology_enrichment_celltype=CL:0002319!3.76e-12!25;CL:0000047!7.95e-12!8;CL:0000133!4.56e-10!59;CL:0000540!9.66e-10!6;CL:0000031!9.66e-10!6;CL:0000404!9.66e-10!6;CL:0000128!1.22e-07!7;CL:0000126!1.22e-07!7;CL:0000127!1.22e-07!7;CL:0002453!1.22e-07!7;CL:0002322!1.42e-07!5;CL:0000221!3.58e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.78e-20;25!CL:0000540;1.55e-18;6!CL:0000404;1.55e-18;6!CL:0000128;7.94e-10;7!CL:0000126;7.94e-10;7!CL:0000127;7.94e-10;7!CL:0000123;2.95e-09;2!CL:0000242;2.95e-09;2!CL:0002322;5.20e-08;5!CL:0000095;2.23e-07;17 | |ontology_enrichment_celltype_v019=CL:0002319;1.78e-20;25!CL:0000540;1.55e-18;6!CL:0000404;1.55e-18;6!CL:0000128;7.94e-10;7!CL:0000126;7.94e-10;7!CL:0000127;7.94e-10;7!CL:0000123;2.95e-09;2!CL:0000242;2.95e-09;2!CL:0002322;5.20e-08;5!CL:0000095;2.23e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.23e-20,25;CL:0000047,2.00e-19,8;CL:0000540,2.54e-18,6;CL:0000031,2.54e-18,6;CL:0000404,2.54e-18,6;CL:0000133,2.37e-12,59;CL:0000128,7.87e-10,7;CL:0000126,7.87e-10,7;CL:0000127,7.87e-10,7;CL:0002453,7.87e-10,7;CL:0000221,1.31e-09,72;CL:0000242,2.83e-09,2;CL:0002322,5.97e-08,5;CL:0000095,2.19e-07,17;CL:0000123,2.19e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000031;1.55e-18;6!UBERON:0006241;3.52e-14;3!UBERON:0003057;3.52e-14;3!CL:0000133;1.51e-07;59 | |ontology_enrichment_development_v019=CL:0000031;1.55e-18;6!UBERON:0006241;3.52e-14;3!UBERON:0003057;3.52e-14;3!CL:0000133;1.51e-07;59 | ||
|ontology_enrichment_disease=DOID:3095!5.37e-07!22;DOID:2994!5.37e-07!22 | |ontology_enrichment_disease=DOID:3095!5.37e-07!22;DOID:2994!5.37e-07!22 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr6:3224844..3224889,- | |short_description=p@chr6:3224844..3224889,- | ||
}} | }} |
Latest revision as of 00:21, 31 July 2015
Short description: | p@chr6:3224844..3224889, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:3224844..3224889, - |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.23e-20 | 25 |
neuronal stem cell | 2.00e-19 | 8 |
neuron | 2.54e-18 | 6 |
neuroblast | 2.54e-18 | 6 |
electrically signaling cell | 2.54e-18 | 6 |
neurectodermal cell | 2.37e-12 | 59 |
oligodendrocyte | 7.87e-10 | 7 |
macroglial cell | 7.87e-10 | 7 |
astrocyte | 7.87e-10 | 7 |
oligodendrocyte precursor cell | 7.87e-10 | 7 |
ectodermal cell | 1.31e-09 | 72 |
Merkel cell | 2.83e-09 | 2 |
embryonic stem cell | 5.97e-08 | 5 |
neuron associated cell | 2.19e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 2.19e-07 | 17 |