FFCP PHASE1:Hg19::chr6:70506762..70506829,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55788 | |EntrezGene=55788 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23038 | |HGNC=23038 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000472827_5end | |association_with_transcript=0bp_to_ENST00000472827_5end | ||
|cluster_id=chr6:70506762..70506829,- | |||
|description=CAGE_peak_2_at_LMBRD1_5end | |description=CAGE_peak_2_at_LMBRD1_5end | ||
|id=chr6:70506762..70506829,- | |id=chr6:70506762..70506829,- | ||
|ontology_enrichment_celltype=CL:0000738!1.26e-42!140;CL:0000037!1.41e-40!172;CL:0000566!1.41e-40!172;CL:0002032!4.56e-38!165;CL:0000837!4.56e-38!165;CL:0000988!7.24e-36!182;CL:0002031!1.80e-34!124;CL:0002087!8.55e-33!119;CL:0000763!1.62e-20!112;CL:0000049!1.62e-20!112;CL:0000766!3.72e-20!76;CL:0000839!3.10e-17!70;CL:0000542!1.37e-16!53;CL:0000051!1.37e-16!53;CL:0000557!2.38e-16!71;CL:0000838!2.60e-16!52;CL:0002009!1.96e-15!65;CL:0002194!6.36e-15!63;CL:0000576!6.36e-15!63;CL:0000040!6.36e-15!63;CL:0000559!6.36e-15!63;CL:0000860!5.49e-09!45;CL:0000791!1.25e-08!18;CL:0000789!1.25e-08!18;CL:0002420!1.25e-08!18;CL:0002419!1.25e-08!18;CL:0000790!1.25e-08!18;CL:0002057!1.41e-08!42;CL:0000945!1.46e-08!24;CL:0000826!1.46e-08!24;CL:0000236!3.05e-08!14;CL:0000084!7.05e-08!25;CL:0000827!7.05e-08!25;CL:0000451!4.72e-07!10 | |ontology_enrichment_celltype=CL:0000738!1.26e-42!140;CL:0000037!1.41e-40!172;CL:0000566!1.41e-40!172;CL:0002032!4.56e-38!165;CL:0000837!4.56e-38!165;CL:0000988!7.24e-36!182;CL:0002031!1.80e-34!124;CL:0002087!8.55e-33!119;CL:0000763!1.62e-20!112;CL:0000049!1.62e-20!112;CL:0000766!3.72e-20!76;CL:0000839!3.10e-17!70;CL:0000542!1.37e-16!53;CL:0000051!1.37e-16!53;CL:0000557!2.38e-16!71;CL:0000838!2.60e-16!52;CL:0002009!1.96e-15!65;CL:0002194!6.36e-15!63;CL:0000576!6.36e-15!63;CL:0000040!6.36e-15!63;CL:0000559!6.36e-15!63;CL:0000860!5.49e-09!45;CL:0000791!1.25e-08!18;CL:0000789!1.25e-08!18;CL:0002420!1.25e-08!18;CL:0002419!1.25e-08!18;CL:0000790!1.25e-08!18;CL:0002057!1.41e-08!42;CL:0000945!1.46e-08!24;CL:0000826!1.46e-08!24;CL:0000236!3.05e-08!14;CL:0000084!7.05e-08!25;CL:0000827!7.05e-08!25;CL:0000451!4.72e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000542;4.27e-10;53!CL:0000738;1.61e-09;136!CL:0002087;5.21e-09;104!CL:0000791;1.19e-08;18!CL:0000789;1.19e-08;18!CL:0002419;1.19e-08;18!CL:0000945;1.43e-08;24!CL:0000766;2.77e-08;69!CL:0000236;3.27e-08;13!CL:0000084;6.97e-08;25!CL:0000576;1.71e-07;48!CL:0000473;3.38e-07;39!CL:0000234;3.38e-07;39!CL:0000451;4.65e-07;10 | |ontology_enrichment_celltype_v019=CL:0000542;4.27e-10;53!CL:0000738;1.61e-09;136!CL:0002087;5.21e-09;104!CL:0000791;1.19e-08;18!CL:0000789;1.19e-08;18!CL:0002419;1.19e-08;18!CL:0000945;1.43e-08;24!CL:0000766;2.77e-08;69!CL:0000236;3.27e-08;13!CL:0000084;6.97e-08;25!CL:0000576;1.71e-07;48!CL:0000473;3.38e-07;39!CL:0000234;3.38e-07;39!CL:0000451;4.65e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.80e-43,136;CL:0000037,1.51e-40,168;CL:0002032,4.81e-38,161;CL:0000837,4.81e-38,161;CL:0000988,1.20e-36,177;CL:0002031,1.32e-34,120;CL:0002087,6.17e-33,115;CL:0000763,1.70e-20,108;CL:0000049,1.70e-20,108;CL:0000766,2.42e-20,72;CL:0000839,2.19e-17,66;CL:0000542,1.37e-16,53;CL:0000051,1.37e-16,53;CL:0000557,1.83e-16,67;CL:0000838,2.59e-16,52;CL:0002009,1.43e-15,61;CL:0002194,4.66e-15,59;CL:0000576,4.66e-15,59;CL:0000040,4.66e-15,59;CL:0000559,4.66e-15,59;CL:0000473,2.21e-11,48;CL:0000234,2.21e-11,48;CL:0000791,1.25e-08,18;CL:0000789,1.25e-08,18;CL:0002420,1.25e-08,18;CL:0002419,1.25e-08,18;CL:0000790,1.25e-08,18;CL:0000860,1.41e-08,42;CL:0002057,1.41e-08,42;CL:0000945,1.46e-08,24;CL:0000826,1.46e-08,24;CL:0000236,3.04e-08,14;CL:0000084,7.05e-08,25;CL:0000827,7.05e-08,25;CL:0000451,4.72e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000051;4.27e-10;53!CL:0000790;1.19e-08;18 | |ontology_enrichment_development_v019=CL:0000051;4.27e-10;53!CL:0000790;1.19e-08;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-24!115;UBERON:0002390!9.89e-20!102;UBERON:0003061!9.89e-20!102;UBERON:0002193!3.52e-16!112;UBERON:0002371!1.73e-12!80;UBERON:0001474!5.12e-11!86;UBERON:0002405!2.18e-10!115;UBERON:0004765!3.80e-09!101;UBERON:0001434!3.80e-09!101;UBERON:0001049!2.94e-08!57;UBERON:0005068!2.94e-08!57;UBERON:0006241!2.94e-08!57;UBERON:0007135!2.94e-08!57;UBERON:0000178!9.59e-07!15;UBERON:0000179!9.59e-07!15;UBERON:0000463!9.59e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!1.02e-24!115;UBERON:0002390!9.89e-20!102;UBERON:0003061!9.89e-20!102;UBERON:0002193!3.52e-16!112;UBERON:0002371!1.73e-12!80;UBERON:0001474!5.12e-11!86;UBERON:0002405!2.18e-10!115;UBERON:0004765!3.80e-09!101;UBERON:0001434!3.80e-09!101;UBERON:0001049!2.94e-08!57;UBERON:0005068!2.94e-08!57;UBERON:0006241!2.94e-08!57;UBERON:0007135!2.94e-08!57;UBERON:0000178!9.59e-07!15;UBERON:0000179!9.59e-07!15;UBERON:0000463!9.59e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.85e-07;114!UBERON:0000178;8.53e-07;15!UBERON:0000179;8.53e-07;15!UBERON:0000463;8.53e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0007023;1.85e-07;114!UBERON:0000178;8.53e-07;15!UBERON:0000179;8.53e-07;15!UBERON:0000463;8.53e-07;15 | ||
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| ||
|short_description=p2@LMBRD1 | |short_description=p2@LMBRD1 | ||
}} | }} |
Latest revision as of 15:09, 19 September 2015
Short description: | p2@LMBRD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LMBRD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000472827_5end |
EntrezGene: | LMBRD1 |
HGNC: | 23038 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.49e-24 | 114 |
hematopoietic system | 9.66e-20 | 98 |
blood island | 9.66e-20 | 98 |
hemolymphoid system | 4.34e-16 | 108 |
bone marrow | 1.88e-12 | 76 |
immune system | 2.27e-11 | 93 |
bone element | 6.34e-11 | 82 |
skeletal element | 3.66e-10 | 90 |
skeletal system | 1.78e-08 | 100 |
neural tube | 5.38e-08 | 56 |
neural rod | 5.38e-08 | 56 |
future spinal cord | 5.38e-08 | 56 |
neural keel | 5.38e-08 | 56 |
regional part of nervous system | 5.51e-07 | 53 |
regional part of brain | 5.51e-07 | 53 |
blood | 9.59e-07 | 15 |
haemolymphatic fluid | 9.59e-07 | 15 |
organism substance | 9.59e-07 | 15 |