FFCP PHASE1:Hg19::chr1:76081808..76081862,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:76081808..76081862,-
|short_description=p1@SLC44A5
|description=CAGE_peak_1_at_SLC44A5_5end
|association_with_transcript=-114bp_to_uc010ora.1_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=204962 | |EntrezGene=204962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=28524 | |HGNC=28524 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-114bp_to_uc010ora.1_5end | |||
|cluster_id=chr1:76081808..76081862,- | |||
|description=CAGE_peak_1_at_SLC44A5_5end | |||
|id=chr1:76081808..76081862,- | |||
|ontology_enrichment_celltype=CL:0000071!3.52e-09!18;CL:0002546!3.52e-09!18;CL:0002139!8.28e-09!24;CL:1000413!2.44e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:1000413;9.98e-12;9!CL:0002544;1.18e-08;6!CL:0000071;2.01e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:1000413,1.60e-11,9;CL:0000071,1.85e-08,18;CL:0002546,1.85e-08,18;CL:0002544,2.36e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.01e-09;82!CL:0002546;2.01e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000956;3.06e-29;25!UBERON:0000203;3.06e-29;25!UBERON:0001869;2.36e-28;32!UBERON:0001893;1.45e-27;34!UBERON:0003528;8.82e-27;34!UBERON:0002020;8.82e-27;34!UBERON:0002791;2.64e-26;32!UBERON:0002619;7.01e-26;22!UBERON:0002780;5.43e-25;41!UBERON:0001890;5.43e-25;41!UBERON:0001950;7.87e-24;20!UBERON:0000073;2.58e-20;53!UBERON:0002616;2.58e-20;53!UBERON:0001017;6.79e-16;75!UBERON:0001016;1.03e-14;83!UBERON:0000955;1.91e-14;68!UBERON:0003915;9.98e-12;9!UBERON:0004700;9.98e-12;9!UBERON:0001917;9.98e-12;9!UBERON:0000200;1.21e-09;6!UBERON:0004638;2.01e-08;18!UBERON:0001986;2.01e-08;18!UBERON:0004852;2.01e-08;18!UBERON:0002021;2.21e-08;5!UBERON:0001872;4.39e-08;5!UBERON:0000487;8.99e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.36e-42,89;UBERON:0001017,1.06e-40,81;UBERON:0001049,1.50e-36,56;UBERON:0005068,1.50e-36,56;UBERON:0006241,1.50e-36,56;UBERON:0007135,1.50e-36,56;UBERON:0002780,1.19e-34,41;UBERON:0001890,1.19e-34,41;UBERON:0003080,1.19e-34,41;UBERON:0006240,1.19e-34,41;UBERON:0000955,4.32e-33,68;UBERON:0006238,4.32e-33,68;UBERON:0000073,5.94e-33,53;UBERON:0002616,5.94e-33,53;UBERON:0003075,3.61e-32,82;UBERON:0007284,3.61e-32,82;UBERON:0001869,1.12e-31,32;UBERON:0002346,1.24e-31,86;UBERON:0001893,2.53e-31,34;UBERON:0003528,4.22e-31,34;UBERON:0002020,4.22e-31,34;UBERON:0000956,2.90e-29,25;UBERON:0000203,2.90e-29,25;UBERON:0002791,3.47e-29,32;UBERON:0000025,2.49e-28,192;UBERON:0003056,3.46e-28,61;UBERON:0002619,6.46e-26,22;UBERON:0001950,8.25e-24,20;UBERON:0010371,5.95e-22,104;UBERON:0010314,7.08e-21,132;UBERON:0004121,3.09e-19,171;UBERON:0000924,3.09e-19,171;UBERON:0006601,3.09e-19,171;UBERON:0004111,1.48e-18,240;UBERON:0011216,1.16e-14,223;UBERON:0000483,1.55e-13,306;UBERON:0000119,3.52e-13,309;UBERON:0007023,5.94e-13,114;UBERON:0003915,1.60e-11,9;UBERON:0004700,1.60e-11,9;UBERON:0001917,1.60e-11,9;UBERON:0000200,1.15e-09,6;UBERON:0007500,8.57e-09,59;UBERON:0001981,8.57e-09,59;UBERON:0004537,8.57e-09,59;UBERON:0006965,8.57e-09,59;UBERON:0004638,1.85e-08,18;UBERON:0001986,1.85e-08,18;UBERON:0004852,1.85e-08,18;UBERON:0002021,2.35e-08,5;UBERON:0001872,4.25e-08,5;UBERON:0000487,8.63e-08,22;UBERON:0001637,1.25e-07,42;UBERON:0003509,1.25e-07,42;UBERON:0004572,1.25e-07,42;UBERON:0000055,2.23e-07,68;UBERON:0000922,3.70e-07,592 | |||
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| ||
|short_description=p1@SLC44A5 | |||
}} | }} |
Latest revision as of 05:53, 19 September 2015
Short description: | p1@SLC44A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC44A5_5end |
Coexpression cluster: | NA |
Association with transcript: | -114bp_to_uc010ora.1_5end |
EntrezGene: | SLC44A5 |
HGNC: | 28524 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of artery | 1.60e-11 | 9 |
blood vessel endothelial cell | 1.85e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.85e-08 | 18 |
aortic endothelial cell | 2.36e-08 | 6 |