FFCP PHASE1:Hg19::chr14:21249200..21249248,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6039 | |EntrezGene=6039 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10048 | |HGNC=10048 | ||
|TSSclassifier=strong | |||
|UniProt=Q93091,Q6IB39 | |UniProt=Q93091,Q6IB39 | ||
|association_with_transcript=0bp_to_ENST00000304677,NM_005615,uc001vye.3_5end | |association_with_transcript=0bp_to_ENST00000304677,NM_005615,uc001vye.3_5end | ||
|cluster_id=chr14:21249200..21249248,+ | |||
|coexpression_cluster_id=C691 | |coexpression_cluster_id=C691 | ||
|description=CAGE_peak_1_at_RNASE6_5end | |description=CAGE_peak_1_at_RNASE6_5end | ||
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|ontology_enrichment_celltype=CL:0000037!2.89e-59!172;CL:0000566!2.89e-59!172;CL:0000738!2.25e-56!140;CL:0002032!1.41e-54!165;CL:0000837!1.41e-54!165;CL:0000988!2.01e-52!182;CL:0002087!5.15e-48!119;CL:0002031!3.67e-46!124;CL:0000763!1.95e-38!112;CL:0000049!1.95e-38!112;CL:0000766!7.75e-37!76;CL:0002009!1.05e-33!65;CL:0000557!1.72e-32!71;CL:0002194!1.79e-32!63;CL:0000576!1.79e-32!63;CL:0000040!1.79e-32!63;CL:0000559!1.79e-32!63;CL:0000839!3.61e-31!70;CL:0002057!1.13e-27!42;CL:0000860!2.18e-24!45;CL:0000542!8.62e-14!53;CL:0000051!8.62e-14!53;CL:0000838!1.88e-13!52;CL:0000945!4.33e-10!24;CL:0000826!4.33e-10!24;CL:0000236!1.37e-09!14;CL:0000094!6.71e-07!8;CL:0000451!7.72e-07!10;CL:0000134!8.54e-07!358 | |ontology_enrichment_celltype=CL:0000037!2.89e-59!172;CL:0000566!2.89e-59!172;CL:0000738!2.25e-56!140;CL:0002032!1.41e-54!165;CL:0000837!1.41e-54!165;CL:0000988!2.01e-52!182;CL:0002087!5.15e-48!119;CL:0002031!3.67e-46!124;CL:0000763!1.95e-38!112;CL:0000049!1.95e-38!112;CL:0000766!7.75e-37!76;CL:0002009!1.05e-33!65;CL:0000557!1.72e-32!71;CL:0002194!1.79e-32!63;CL:0000576!1.79e-32!63;CL:0000040!1.79e-32!63;CL:0000559!1.79e-32!63;CL:0000839!3.61e-31!70;CL:0002057!1.13e-27!42;CL:0000860!2.18e-24!45;CL:0000542!8.62e-14!53;CL:0000051!8.62e-14!53;CL:0000838!1.88e-13!52;CL:0000945!4.33e-10!24;CL:0000826!4.33e-10!24;CL:0000236!1.37e-09!14;CL:0000094!6.71e-07!8;CL:0000451!7.72e-07!10;CL:0000134!8.54e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.42e-24;39!CL:0000234;1.42e-24;39!CL:0000860;1.12e-23;33!CL:0002057;1.12e-23;33!CL:0000576;6.20e-22;48!CL:0000766;2.09e-17;69!CL:0002087;1.24e-12;104!CL:0000738;2.13e-12;136!CL:0000763;4.78e-12;100!CL:0000236;2.45e-10;13!CL:0000945;1.00e-09;24!CL:0000988;3.04e-08;177!CL:0000094;1.59e-07;8!CL:0000235;4.16e-07;6 | |ontology_enrichment_celltype_v019=CL:0000473;1.42e-24;39!CL:0000234;1.42e-24;39!CL:0000860;1.12e-23;33!CL:0002057;1.12e-23;33!CL:0000576;6.20e-22;48!CL:0000766;2.09e-17;69!CL:0002087;1.24e-12;104!CL:0000738;2.13e-12;136!CL:0000763;4.78e-12;100!CL:0000236;2.45e-10;13!CL:0000945;1.00e-09;24!CL:0000988;3.04e-08;177!CL:0000094;1.59e-07;8!CL:0000235;4.16e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.43e-52,136;CL:0000037,2.36e-50,168;CL:0002087,2.63e-46,115;CL:0002032,1.40e-45,161;CL:0000837,1.40e-45,161;CL:0000988,3.31e-45,177;CL:0000766,4.67e-44,72;CL:0002009,2.23e-42,61;CL:0002031,1.03e-41,120;CL:0002194,5.47e-41,59;CL:0000576,5.47e-41,59;CL:0000040,5.47e-41,59;CL:0000559,5.47e-41,59;CL:0000557,4.63e-39,67;CL:0000763,1.89e-37,108;CL:0000049,1.89e-37,108;CL:0000473,2.10e-36,48;CL:0000234,2.10e-36,48;CL:0000839,1.00e-35,66;CL:0000860,1.02e-30,42;CL:0002057,1.02e-30,42;CL:0000236,1.60e-10,14;CL:0000945,1.14e-09,24;CL:0000826,1.14e-09,24;CL:0000542,3.69e-08,53;CL:0000051,3.69e-08,53;CL:0000838,7.64e-08,52;CL:0000094,1.60e-07,8;CL:0000235,4.17e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.80e-22;42!CL:0000049;1.58e-10;108 | |ontology_enrichment_development_v019=CL:0002057;2.80e-22;42!CL:0000049;1.58e-10;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.53e-43!115;UBERON:0002390!2.94e-36!102;UBERON:0003061!2.94e-36!102;UBERON:0002193!5.64e-32!112;UBERON:0002371!5.31e-28!80;UBERON:0001474!6.04e-24!86;UBERON:0002405!1.33e-20!115;UBERON:0004765!2.08e-17!101;UBERON:0001434!2.08e-17!101;UBERON:0001049!4.76e-13!57;UBERON:0005068!4.76e-13!57;UBERON:0006241!4.76e-13!57;UBERON:0007135!4.76e-13!57;UBERON:0003080!8.30e-11!42;UBERON:0002780!2.39e-10!41;UBERON:0001890!2.39e-10!41;UBERON:0006240!2.39e-10!41;UBERON:0003081!2.69e-10!216;UBERON:0002616!1.27e-09!59;UBERON:0002020!2.13e-08!34;UBERON:0003528!2.13e-08!34;UBERON:0001893!2.16e-08!34;UBERON:0002791!3.53e-08!33;UBERON:0001869!1.40e-07!32;UBERON:0000955!1.88e-07!69;UBERON:0006238!1.88e-07!69;UBERON:0002619!3.94e-07!22;UBERON:0001017!4.53e-07!82;UBERON:0003075!8.17e-07!86;UBERON:0007284!8.17e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!2.53e-43!115;UBERON:0002390!2.94e-36!102;UBERON:0003061!2.94e-36!102;UBERON:0002193!5.64e-32!112;UBERON:0002371!5.31e-28!80;UBERON:0001474!6.04e-24!86;UBERON:0002405!1.33e-20!115;UBERON:0004765!2.08e-17!101;UBERON:0001434!2.08e-17!101;UBERON:0001049!4.76e-13!57;UBERON:0005068!4.76e-13!57;UBERON:0006241!4.76e-13!57;UBERON:0007135!4.76e-13!57;UBERON:0003080!8.30e-11!42;UBERON:0002780!2.39e-10!41;UBERON:0001890!2.39e-10!41;UBERON:0006240!2.39e-10!41;UBERON:0003081!2.69e-10!216;UBERON:0002616!1.27e-09!59;UBERON:0002020!2.13e-08!34;UBERON:0003528!2.13e-08!34;UBERON:0001893!2.16e-08!34;UBERON:0002791!3.53e-08!33;UBERON:0001869!1.40e-07!32;UBERON:0000955!1.88e-07!69;UBERON:0006238!1.88e-07!69;UBERON:0002619!3.94e-07!22;UBERON:0001017!4.53e-07!82;UBERON:0003075!8.17e-07!86;UBERON:0007284!8.17e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;8.24e-12;114!UBERON:0002780;2.41e-08;41!UBERON:0001890;2.41e-08;41!UBERON:0000073;1.52e-07;53!UBERON:0002616;1.52e-07;53!UBERON:0001893;1.61e-07;34!UBERON:0000178;1.95e-07;15!UBERON:0000179;1.95e-07;15!UBERON:0000463;1.95e-07;15!UBERON:0003528;2.29e-07;34!UBERON:0002020;2.29e-07;34!UBERON:0002791;2.80e-07;32!UBERON:0002619;3.99e-07;22!UBERON:0001869;4.28e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0007023;8.24e-12;114!UBERON:0002780;2.41e-08;41!UBERON:0001890;2.41e-08;41!UBERON:0000073;1.52e-07;53!UBERON:0002616;1.52e-07;53!UBERON:0001893;1.61e-07;34!UBERON:0000178;1.95e-07;15!UBERON:0000179;1.95e-07;15!UBERON:0000463;1.95e-07;15!UBERON:0003528;2.29e-07;34!UBERON:0002020;2.29e-07;34!UBERON:0002791;2.80e-07;32!UBERON:0002619;3.99e-07;22!UBERON:0001869;4.28e-07;32 | ||
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| ||
|short_description=p1@RNASE6 | |short_description=p1@RNASE6 | ||
}} | }} |
Latest revision as of 00:24, 19 September 2015
Short description: | p1@RNASE6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNASE6_5end |
Coexpression cluster: | C691_Monocytederived_CD14_Macrophage_CD19_Dendritic_immature_Whole |
Association with transcript: | 0bp_to_ENST00000304677, NM_005615, uc001vye.3_5end |
EntrezGene: | RNASE6 |
HGNC: | 10048 |
UniProt: | Q93091Q6IB39 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.43e-52 | 136 |
hematopoietic stem cell | 2.36e-50 | 168 |
nongranular leukocyte | 2.63e-46 | 115 |
hematopoietic oligopotent progenitor cell | 1.40e-45 | 161 |
hematopoietic multipotent progenitor cell | 1.40e-45 | 161 |
hematopoietic cell | 3.31e-45 | 177 |
myeloid leukocyte | 4.67e-44 | 72 |
macrophage dendritic cell progenitor | 2.23e-42 | 61 |
hematopoietic lineage restricted progenitor cell | 1.03e-41 | 120 |
monopoietic cell | 5.47e-41 | 59 |
monocyte | 5.47e-41 | 59 |
monoblast | 5.47e-41 | 59 |
promonocyte | 5.47e-41 | 59 |
granulocyte monocyte progenitor cell | 4.63e-39 | 67 |
myeloid cell | 1.89e-37 | 108 |
common myeloid progenitor | 1.89e-37 | 108 |
defensive cell | 2.10e-36 | 48 |
phagocyte | 2.10e-36 | 48 |
myeloid lineage restricted progenitor cell | 1.00e-35 | 66 |
classical monocyte | 1.02e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.02e-30 | 42 |
B cell | 1.60e-10 | 14 |
lymphocyte of B lineage | 1.14e-09 | 24 |
pro-B cell | 1.14e-09 | 24 |
lymphocyte | 3.69e-08 | 53 |
common lymphoid progenitor | 3.69e-08 | 53 |
lymphoid lineage restricted progenitor cell | 7.64e-08 | 52 |
granulocyte | 1.60e-07 | 8 |
macrophage | 4.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.58e-45 | 114 |
hematopoietic system | 4.64e-42 | 98 |
blood island | 4.64e-42 | 98 |
hemolymphoid system | 1.31e-37 | 108 |
bone marrow | 4.43e-34 | 76 |
immune system | 7.60e-31 | 93 |
bone element | 1.46e-29 | 82 |
skeletal element | 1.47e-24 | 90 |
skeletal system | 2.52e-20 | 100 |
neural tube | 1.15e-13 | 56 |
neural rod | 1.15e-13 | 56 |
future spinal cord | 1.15e-13 | 56 |
neural keel | 1.15e-13 | 56 |
lateral plate mesoderm | 1.60e-13 | 203 |
regional part of nervous system | 2.17e-12 | 53 |
regional part of brain | 2.17e-12 | 53 |
regional part of forebrain | 5.91e-11 | 41 |
forebrain | 5.91e-11 | 41 |
anterior neural tube | 5.91e-11 | 41 |
future forebrain | 5.91e-11 | 41 |
brain grey matter | 8.58e-09 | 34 |
gray matter | 8.58e-09 | 34 |
telencephalon | 8.70e-09 | 34 |
brain | 3.45e-08 | 68 |
future brain | 3.45e-08 | 68 |
regional part of telencephalon | 3.97e-08 | 32 |
central nervous system | 4.99e-08 | 81 |
cerebral hemisphere | 6.75e-08 | 32 |
neural plate | 1.14e-07 | 82 |
presumptive neural plate | 1.14e-07 | 82 |
blood | 1.93e-07 | 15 |
haemolymphatic fluid | 1.93e-07 | 15 |
organism substance | 1.93e-07 | 15 |
tissue | 3.19e-07 | 773 |
regional part of cerebral cortex | 3.95e-07 | 22 |
musculoskeletal system | 9.42e-07 | 167 |