FFCP PHASE1:Hg19::chr20:57875658..57875673,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:57875658..57875673,+
|short_description=p1@EDN3
|description=CAGE_peak_1_at_EDN3_5end
|association_with_transcript=0bp_to_ENST00000371025_5end
|EntrezGen...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1908 | |EntrezGene=1908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3178 | |HGNC=3178 | ||
|TSSclassifier=strong | |||
|UniProt=Q4FAT2 | |UniProt=Q4FAT2 | ||
|association_with_transcript=0bp_to_ENST00000371025_5end | |||
|cluster_id=chr20:57875658..57875673,+ | |||
|coexpression_cluster_id=C4056 | |||
|description=CAGE_peak_1_at_EDN3_5end | |||
|id=chr20:57875658..57875673,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.03e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.26e-60!115;UBERON:0001049!2.80e-45!57;UBERON:0005068!2.80e-45!57;UBERON:0006241!2.80e-45!57;UBERON:0007135!2.80e-45!57;UBERON:0002616!8.03e-37!59;UBERON:0003080!1.94e-35!42;UBERON:0002780!2.89e-34!41;UBERON:0001890!2.89e-34!41;UBERON:0006240!2.89e-34!41;UBERON:0003075!6.05e-33!86;UBERON:0007284!6.05e-33!86;UBERON:0001017!9.95e-33!82;UBERON:0005743!2.42e-32!86;UBERON:0000955!2.75e-32!69;UBERON:0006238!2.75e-32!69;UBERON:0002346!8.66e-31!90;UBERON:0000073!1.70e-30!94;UBERON:0001016!1.70e-30!94;UBERON:0000153!4.61e-28!129;UBERON:0007811!4.61e-28!129;UBERON:0003056!1.09e-27!61;UBERON:0001893!2.30e-27!34;UBERON:0002020!7.61e-27!34;UBERON:0003528!7.61e-27!34;UBERON:0000033!2.32e-26!123;UBERON:0002791!5.19e-26!33;UBERON:0001869!6.33e-25!32;UBERON:0004121!2.74e-23!169;UBERON:0000924!2.57e-22!173;UBERON:0006601!2.57e-22!173;UBERON:0002619!1.15e-19!22;UBERON:0001950!1.96e-17!20;UBERON:0000956!9.69e-17!25;UBERON:0000203!9.69e-17!25;UBERON:0002308!3.27e-12!9;UBERON:0000125!3.27e-12!9;UBERON:0002298!8.45e-12!8;UBERON:0000062!1.14e-11!511;UBERON:0000064!1.94e-11!219;UBERON:0000475!2.10e-11!365;UBERON:0000481!3.43e-11!347;UBERON:0003076!8.92e-11!15;UBERON:0003057!8.92e-11!15;UBERON:0009663!5.46e-10!7;UBERON:0002420!1.74e-09!9;UBERON:0007245!1.74e-09!9;UBERON:0010009!1.74e-09!9;UBERON:0010011!1.74e-09!9;UBERON:0000454!1.74e-09!9;UBERON:0000477!3.49e-09!286;UBERON:0000922!7.90e-09!612;UBERON:0004111!1.16e-08!241;UBERON:0001871!1.92e-08!7;UBERON:0000025!2.27e-08!194;UBERON:0001894!2.41e-08!7;UBERON:0006222!2.41e-08!7;UBERON:0002050!3.56e-08!605;UBERON:0005423!3.56e-08!605;UBERON:0000483!6.59e-08!309;UBERON:0000468!7.16e-08!659;UBERON:0000467!9.58e-08!625;UBERON:0000923!1.05e-07!604;UBERON:0005291!1.05e-07!604;UBERON:0006598!1.05e-07!604;UBERON:0002532!1.05e-07!604;UBERON:0000480!1.10e-07!626;UBERON:0000119!1.13e-07!312;UBERON:0004733!2.15e-07!12;UBERON:0002028!2.15e-07!12;UBERON:0007277!2.15e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.64e-17;41!UBERON:0001890;4.64e-17;41!UBERON:0000073;2.74e-15;53!UBERON:0002616;2.74e-15;53!UBERON:0001869;6.09e-15;32!UBERON:0001893;8.62e-15;34!UBERON:0001950;2.79e-14;20!UBERON:0002619;7.79e-13;22!UBERON:0002791;1.02e-12;32!UBERON:0003528;1.18e-11;34!UBERON:0002020;1.18e-11;34!UBERON:0000956;4.36e-11;25!UBERON:0000203;4.36e-11;25!UBERON:0007023;4.54e-11;114!UBERON:0000922;1.49e-09;49!UBERON:0001896;3.43e-09;3!UBERON:0005290;3.43e-09;3!UBERON:0001017;3.60e-09;75!UBERON:0000955;5.98e-09;68!UBERON:0002298;6.76e-08;6!UBERON:0000007;9.20e-08;2!UBERON:0001016;2.23e-07;83!UBERON:0001829;2.48e-07;2!UBERON:0001894;2.80e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.91e-33,114;UBERON:0001049,1.32e-27,56;UBERON:0005068,1.32e-27,56;UBERON:0006241,1.32e-27,56;UBERON:0007135,1.32e-27,56;UBERON:0000073,6.40e-27,53;UBERON:0002616,6.40e-27,53;UBERON:0002780,1.61e-22,41;UBERON:0001890,1.61e-22,41;UBERON:0003080,1.61e-22,41;UBERON:0006240,1.61e-22,41;UBERON:0003075,4.17e-20,82;UBERON:0007284,4.17e-20,82;UBERON:0000955,2.96e-19,68;UBERON:0006238,2.96e-19,68;UBERON:0002346,7.60e-19,86;UBERON:0011216,1.27e-18,223;UBERON:0001017,2.70e-18,81;UBERON:0001893,5.23e-17,34;UBERON:0003056,5.34e-17,61;UBERON:0001869,7.34e-16,32;UBERON:0001016,7.92e-16,89;UBERON:0010371,9.01e-16,104;UBERON:0010314,2.69e-15,132;UBERON:0001950,2.98e-14,20;UBERON:0002791,1.19e-13,32;UBERON:0002619,8.27e-13,22;UBERON:0003528,1.10e-12,34;UBERON:0002020,1.10e-12,34;UBERON:0004121,1.14e-11,171;UBERON:0000924,1.14e-11,171;UBERON:0006601,1.14e-11,171;UBERON:0000956,4.60e-11,25;UBERON:0000203,4.60e-11,25;UBERON:0001896,2.65e-09,3;UBERON:0005290,2.65e-09,3;UBERON:0010096,2.65e-09,3;UBERON:0002298,5.25e-08,6;UBERON:0000007,9.22e-08,2;UBERON:0001829,2.23e-07,2;UBERON:0001894,2.81e-07,7;UBERON:0006222,2.81e-07,7;UBERON:0000922,3.37e-07,592;UBERON:0004111,7.26e-07,240;UBERON:0000341,9.55e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16551441881077,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,8.82273982018842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13841952129715,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0.140669416410513,0,0,91.8395525356772,0.996239941255349,0,0.251932747854276,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.463840490809256,0,0,0,0.724999575434793,0,0,0,0,0,0,1.77148277162768,0.361789315876224,0,0.442317039724898,1.18219047581419,1.09692698576986,0,0,9.84963308848602,0.113942055847001,0,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,10.0360680718098,0,0,7.51889298278383,0,0,0,0,2.42644078730437,0.802577647298789,2.10838001152805,0,0,0,0,6.04953580243319,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,5.52837393983991,0,31.1853422277135,0,0,1.64608069485285,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0,0,0,0,1.20084057741958,0.684526894459965,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0.415440338029185,0,0,1.94398581305679,0,0.0788057072991982,2.51782023047991,0,0,0,0,0,1.27134268827375,0,0,0,0,0,0,0,0,0,0.646414781807753,0.52893040697076,0,0,0.106787412567695,5.03053776318931,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.3755727921195,1.72022758707021,1.55300672151593,3.60159137060024,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0.157265941855896,0.436838552768056,0,0,0,0,0,0,0,0.352675943690684,0,1.99110597799025,0,0.159633859057151,2.87162909937057,1.00828678488687,3.38870537074668,1.93770774758221,0,0,0,0,0,0,0,0,0.300841313397029,0,3.12605604493237,0,0,0,2.16120270778863,1.56215619722769,0.206686796501184,1.33173201407204,0,2.74128883428591,2.97726707033577,0,0,0,0.672567444437648,52.8060075685869,17.3023265426986,0.0887023701626388,0,0,2.85472878502693,2.10472875401117,0,0,2.59027206406696,0.314231179832004,0,0.913158720509496,0,0,136.305769744884,0,0,0.695433089210318,0,0,0,0,32.6972792703411,0,0,0,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,7.77137588894623,0,0.198950775161368,0,38.7405061393633,0,0,12.8880844040268,5.90110813360685,0,0,0,0.981542335574726,0.297046400327086,6.339835913751,0,2.16163011353663,8.7662727644065,0,0,0,0,0,27.982486287677,0.430018749454354,0,2.24371917630019,0.872701380680755,5.81929524566941,0,0,0,0,0,0,0,0,0,1.0028301571695,0,0.803892390468535,1.65833887891756,0.310298987585686,2.13233981900981,1.90451545170992,0,0.682821857254437,0,25.5861576278223,1.81905470062397,1.52401723527873,5.4757328173645,0.80822463617505,1.57788851863888,2.32862249582209,0,0,0,0,4.69281884806909,0.611207220914332,6.91723503136755,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16551441881077,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,8.82273982018842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13841952129715,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0.140669416410513,0,0,91.8395525356772,0.996239941255349,0,0.251932747854276,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.463840490809256,0,0,0,0.724999575434793,0,0,0,0,0,0,1.77148277162768,0.361789315876224,0,0.442317039724898,1.18219047581419,1.09692698576986,0,0,9.84963308848602,0.113942055847001,0,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,10.0360680718098,0,0,7.51889298278383,0,0,0,0,2.42644078730437,0.802577647298789,2.10838001152805,0,0,0,0,6.04953580243319,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,5.52837393983991,0,31.1853422277135,0,0,1.64608069485285,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0,0,0,0,1.20084057741958,0.684526894459965,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0.415440338029185,0,0,1.94398581305679,0,0.0788057072991982,2.51782023047991,0,0,0,0,0,1.27134268827375,0,0,0,0,0,0,0,0,0,0.646414781807753,0.52893040697076,0,0,0.106787412567695,5.03053776318931,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.3755727921195,1.72022758707021,1.55300672151593,3.60159137060024,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0.157265941855896,0.436838552768056,0,0,0,0,0,0,0,0.352675943690684,0,1.99110597799025,0,0.159633859057151,2.87162909937057,1.00828678488687,3.38870537074668,1.93770774758221,0,0,0,0,0,0,0,0,0.300841313397029,0,3.12605604493237,0,0,0,2.16120270778863,1.56215619722769,0.206686796501184,1.33173201407204,0,2.74128883428591,2.97726707033577,0,0,0,0.672567444437648,52.8060075685869,17.3023265426986,0.0887023701626388,0,0,2.85472878502693,2.10472875401117,0,0,2.59027206406696,0.314231179832004,0,0.913158720509496,0,0,136.305769744884,0,0,0.695433089210318,0,0,0,0,32.6972792703411,0,0,0,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,7.77137588894623,0,0.198950775161368,0,38.7405061393633,0,0,12.8880844040268,5.90110813360685,0,0,0,0.981542335574726,0.297046400327086,6.339835913751,0,2.16163011353663,8.7662727644065,0,0,0,0,0,27.982486287677,0.430018749454354,0,2.24371917630019,0.872701380680755,5.81929524566941,0,0,0,0,0,0,0,0,0,1.0028301571695,0,0.803892390468535,1.65833887891756,0.310298987585686,2.13233981900981,1.90451545170992,0,0.682821857254437,0,25.5861576278223,1.81905470062397,1.52401723527873,5.4757328173645,0.80822463617505,1.57788851863888,2.32862249582209,0,0,0,0,4.69281884806909,0.611207220914332,6.91723503136755,0,0.201273793591026,0 | ||
|short_description=p1@EDN3 | |||
}} | }} |
Latest revision as of 07:39, 17 September 2015
Short description: | p1@EDN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EDN3_5end |
Coexpression cluster: | C4056_retina_anaplastic_pituitary_small_salivary_submaxillary_thyroid |
Association with transcript: | 0bp_to_ENST00000371025_5end |
EntrezGene: | EDN3 |
HGNC: | 3178 |
UniProt: | Q4FAT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data