FFCP PHASE1:Hg19::chr21:17566867..17566899,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:17566867..17566899,+
|short_description=p2@LINC00478
|description=CAGE_peak_2_at_LINC00478_5end
|association_with_transcript=79bp_to_ENST00000445461_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=1274 | |HGNC=1274 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=79bp_to_ENST00000445461_5end | |||
|cluster_id=chr21:17566867..17566899,+ | |||
|coexpression_cluster_id=C4068 | |||
|description=CAGE_peak_2_at_LINC00478_5end | |||
|id=chr21:17566867..17566899,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.92e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.92e-31!115;UBERON:0001017!7.23e-30!82;UBERON:0005743!1.01e-28!86;UBERON:0001049!1.93e-28!57;UBERON:0005068!1.93e-28!57;UBERON:0006241!1.93e-28!57;UBERON:0007135!1.93e-28!57;UBERON:0000955!8.21e-27!69;UBERON:0006238!8.21e-27!69;UBERON:0002616!1.26e-26!59;UBERON:0000073!2.30e-25!94;UBERON:0001016!2.30e-25!94;UBERON:0000153!1.64e-23!129;UBERON:0007811!1.64e-23!129;UBERON:0003075!4.54e-23!86;UBERON:0007284!4.54e-23!86;UBERON:0002780!4.75e-23!41;UBERON:0001890!4.75e-23!41;UBERON:0006240!4.75e-23!41;UBERON:0003080!5.80e-23!42;UBERON:0002346!3.05e-22!90;UBERON:0000033!7.03e-22!123;UBERON:0002020!2.62e-18!34;UBERON:0003528!2.62e-18!34;UBERON:0001893!3.05e-18!34;UBERON:0002791!1.06e-17!33;UBERON:0003056!3.32e-17!61;UBERON:0001869!6.61e-17!32;UBERON:0004121!2.63e-15!169;UBERON:0000924!4.48e-15!173;UBERON:0006601!4.48e-15!173;UBERON:0000956!4.92e-13!25;UBERON:0000203!4.92e-13!25;UBERON:0002619!2.27e-11!22;UBERON:0000477!1.00e-10!286;UBERON:0001950!3.94e-10!20;UBERON:0000475!2.02e-08!365;UBERON:0000481!2.79e-08!347;UBERON:0000062!4.98e-08!511;UBERON:0004111!5.94e-07!241;UBERON:0002308!8.16e-07!9;UBERON:0000125!8.16e-07!9;UBERON:0003076!9.22e-07!15;UBERON:0003057!9.22e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.37e-22;41!UBERON:0001890;1.37e-22;41!UBERON:0001893;3.51e-21;34!UBERON:0000073;4.41e-21;53!UBERON:0002616;4.41e-21;53!UBERON:0003528;1.06e-20;34!UBERON:0002020;1.06e-20;34!UBERON:0002791;1.64e-20;32!UBERON:0001869;3.21e-20;32!UBERON:0000956;6.11e-17;25!UBERON:0000203;6.11e-17;25!UBERON:0002619;1.48e-14;22!UBERON:0001017;2.89e-14;75!UBERON:0000955;2.29e-13;68!UBERON:0001950;8.27e-13;20!UBERON:0001016;5.82e-12;83!UBERON:0000125;2.77e-09;9!UBERON:0002308;2.77e-09;9!UBERON:0002420;9.39e-09;9!UBERON:0007245;9.39e-09;9!UBERON:0010009;9.39e-09;9!UBERON:0010011;9.39e-09;9!UBERON:0000454;9.39e-09;9!UBERON:0007023;1.33e-08;114!UBERON:0001894;2.03e-08;7!UBERON:0009663;1.77e-07;7!UBERON:0002298;5.88e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.19e-38,56;UBERON:0005068,1.19e-38,56;UBERON:0006241,1.19e-38,56;UBERON:0007135,1.19e-38,56;UBERON:0001017,5.00e-38,81;UBERON:0000073,1.36e-35,53;UBERON:0002616,1.36e-35,53;UBERON:0001016,4.21e-34,89;UBERON:0007023,2.49e-33,114;UBERON:0000955,1.95e-32,68;UBERON:0006238,1.95e-32,68;UBERON:0002780,8.75e-32,41;UBERON:0001890,8.75e-32,41;UBERON:0003080,8.75e-32,41;UBERON:0006240,8.75e-32,41;UBERON:0003075,2.05e-30,82;UBERON:0007284,2.05e-30,82;UBERON:0002346,5.98e-29,86;UBERON:0003528,5.71e-25,34;UBERON:0002020,5.71e-25,34;UBERON:0001893,7.11e-25,34;UBERON:0002791,3.58e-23,32;UBERON:0003056,4.72e-23,61;UBERON:0001869,5.87e-23,32;UBERON:0010314,3.39e-21,132;UBERON:0010371,2.62e-20,104;UBERON:0004121,3.67e-19,171;UBERON:0000924,3.67e-19,171;UBERON:0006601,3.67e-19,171;UBERON:0011216,1.99e-17,223;UBERON:0000956,2.13e-17,25;UBERON:0000203,2.13e-17,25;UBERON:0002619,5.12e-15,22;UBERON:0001950,3.00e-13,20;UBERON:0000125,3.96e-09,9;UBERON:0002308,3.96e-09,9;UBERON:0002420,8.04e-09,9;UBERON:0007245,8.04e-09,9;UBERON:0010009,8.04e-09,9;UBERON:0010011,8.04e-09,9;UBERON:0000454,8.04e-09,9;UBERON:0001894,1.84e-08,7;UBERON:0006222,1.84e-08,7;UBERON:0004111,2.07e-08,240;UBERON:0003076,3.35e-08,15;UBERON:0003057,3.35e-08,15;UBERON:0009663,2.40e-07,7;UBERON:0002298,7.13e-07,6;UBERON:0000025,9.46e-07,192 | |||
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| ||
|short_description=p2@LINC00478 | |||
}} | }} |
Latest revision as of 19:39, 17 September 2015
Short description: | p2@LINC00478 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LINC00478_5end |
Coexpression cluster: | C4068_myeloma_Astrocyte_pineal_hippocampus_caudate_cervix_thalamus |
Association with transcript: | 79bp_to_ENST00000445461_5end |
EntrezGene: | NA |
HGNC: | 1274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data