FFCP PHASE1:Hg19::chr12:6233757..6233771,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7450 | |EntrezGene=7450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12726 | |HGNC=12726 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=59bp_to_ENST00000540192_5end | |association_with_transcript=59bp_to_ENST00000540192_5end | ||
|cluster_id=chr12:6233757..6233771,- | |||
|coexpression_cluster_id=C428 | |coexpression_cluster_id=C428 | ||
|description=CAGE_peak_4_at_VWF_5end | |description=CAGE_peak_4_at_VWF_5end | ||
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|ontology_enrichment_celltype=CL:0002139!9.84e-30!24;CL:0000115!1.95e-27!35;CL:0000071!3.47e-22!18;CL:0002546!3.47e-22!18;CL:0002078!2.01e-19!44;CL:0000213!1.58e-12!57;CL:0000215!1.58e-12!57;CL:1000413!1.66e-11!9;CL:0005020!4.26e-09!6;CL:0002138!4.26e-09!6;CL:0005022!4.26e-09!6;CL:0002543!1.17e-08!6;CL:0002544!2.70e-08!6 | |ontology_enrichment_celltype=CL:0002139!9.84e-30!24;CL:0000115!1.95e-27!35;CL:0000071!3.47e-22!18;CL:0002546!3.47e-22!18;CL:0002078!2.01e-19!44;CL:0000213!1.58e-12!57;CL:0000215!1.58e-12!57;CL:1000413!1.66e-11!9;CL:0005020!4.26e-09!6;CL:0002138!4.26e-09!6;CL:0005022!4.26e-09!6;CL:0002543!1.17e-08!6;CL:0002544!2.70e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.21e-34;24!CL:0000115;8.52e-28;36!CL:0000071;2.57e-25;18!CL:0002078;1.39e-15;45!CL:1000413;5.05e-13;9!CL:0000213;1.12e-10;58!CL:0000215;1.12e-10;58!CL:0002138;3.15e-10;6!CL:0002543;1.01e-09;6!CL:0002544;2.59e-09;6 | |ontology_enrichment_celltype_v019=CL:0002139;5.21e-34;24!CL:0000115;8.52e-28;36!CL:0000071;2.57e-25;18!CL:0002078;1.39e-15;45!CL:1000413;5.05e-13;9!CL:0000213;1.12e-10;58!CL:0000215;1.12e-10;58!CL:0002138;3.15e-10;6!CL:0002543;1.01e-09;6!CL:0002544;2.59e-09;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.44e-34,24;CL:0000115,6.41e-33,36;CL:0000071,2.70e-25,18;CL:0002546,2.70e-25,18;CL:0002078,4.99e-24,45;CL:0000213,3.30e-16,58;CL:0000215,3.30e-16,58;CL:1000413,5.32e-13,9;CL:0005020,3.13e-10,6;CL:0002138,3.13e-10,6;CL:0005022,3.13e-10,6;CL:0002543,1.00e-09,6;CL:0002544,2.61e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.57e-25;18!CL:0005022;3.15e-10;6!UBERON:0004872;4.28e-07;7!UBERON:0006601;4.70e-07;82 | |ontology_enrichment_development_v019=CL:0002546;2.57e-25;18!CL:0005022;3.15e-10;6!UBERON:0004872;4.28e-07;7!UBERON:0006601;4.70e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.69e-70!115;UBERON:0001049!6.25e-25!57;UBERON:0005068!6.25e-25!57;UBERON:0006241!6.25e-25!57;UBERON:0007135!6.25e-25!57;UBERON:0004111!6.43e-24!241;UBERON:0001986!3.47e-22!18;UBERON:0004638!3.47e-22!18;UBERON:0004852!3.47e-22!18;UBERON:0003080!1.29e-20!42;UBERON:0000477!2.49e-20!286;UBERON:0000025!4.70e-20!194;UBERON:0002616!5.35e-20!59;UBERON:0000955!9.71e-20!69;UBERON:0006238!9.71e-20!69;UBERON:0002780!1.27e-19!41;UBERON:0001890!1.27e-19!41;UBERON:0006240!1.27e-19!41;UBERON:0001017!4.59e-19!82;UBERON:0003075!1.25e-18!86;UBERON:0007284!1.25e-18!86;UBERON:0005743!1.33e-18!86;UBERON:0002346!4.20e-17!90;UBERON:0001893!6.60e-17!34;UBERON:0000487!7.32e-17!22;UBERON:0002020!1.25e-16!34;UBERON:0003528!1.25e-16!34;UBERON:0000073!3.28e-16!94;UBERON:0001016!3.28e-16!94;UBERON:0002791!3.55e-16!33;UBERON:0001869!1.54e-15!32;UBERON:0002619!7.32e-15!22;UBERON:0006914!5.06e-14!25;UBERON:0001950!1.86e-13!20;UBERON:0003056!8.81e-13!61;UBERON:0000956!2.11e-12!25;UBERON:0000203!2.11e-12!25;UBERON:0000055!9.78e-12!69;UBERON:0003915!1.66e-11!9;UBERON:0004700!1.66e-11!9;UBERON:0001917!1.66e-11!9;UBERON:0000153!2.61e-11!129;UBERON:0007811!2.61e-11!129;UBERON:0000483!6.51e-11!309;UBERON:0000119!1.48e-10!312;UBERON:0000033!5.35e-10!123;UBERON:0002465!1.30e-09!10;UBERON:0002049!6.55e-09!79;UBERON:0007798!6.55e-09!79;UBERON:0000468!1.48e-08!659;UBERON:0004121!2.70e-08!169;UBERON:0001473!4.91e-08!8;UBERON:0004536!4.91e-08!8;UBERON:0006558!4.91e-08!8;UBERON:0004872!5.00e-08!84;UBERON:0000467!6.79e-08!625;UBERON:0000480!8.13e-08!626;UBERON:0000064!8.55e-08!219;UBERON:0001981!8.96e-08!60;UBERON:0007500!8.96e-08!60;UBERON:0004537!8.96e-08!60;UBERON:0006965!8.96e-08!60;UBERON:0000924!9.33e-08!173;UBERON:0006601!9.33e-08!173;UBERON:0002298!1.46e-07!8;UBERON:0001009!1.53e-07!113;UBERON:0001638!4.16e-07!9;UBERON:0003920!4.16e-07!9;UBERON:0004582!4.16e-07!9;UBERON:0001871!7.56e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!1.69e-70!115;UBERON:0001049!6.25e-25!57;UBERON:0005068!6.25e-25!57;UBERON:0006241!6.25e-25!57;UBERON:0007135!6.25e-25!57;UBERON:0004111!6.43e-24!241;UBERON:0001986!3.47e-22!18;UBERON:0004638!3.47e-22!18;UBERON:0004852!3.47e-22!18;UBERON:0003080!1.29e-20!42;UBERON:0000477!2.49e-20!286;UBERON:0000025!4.70e-20!194;UBERON:0002616!5.35e-20!59;UBERON:0000955!9.71e-20!69;UBERON:0006238!9.71e-20!69;UBERON:0002780!1.27e-19!41;UBERON:0001890!1.27e-19!41;UBERON:0006240!1.27e-19!41;UBERON:0001017!4.59e-19!82;UBERON:0003075!1.25e-18!86;UBERON:0007284!1.25e-18!86;UBERON:0005743!1.33e-18!86;UBERON:0002346!4.20e-17!90;UBERON:0001893!6.60e-17!34;UBERON:0000487!7.32e-17!22;UBERON:0002020!1.25e-16!34;UBERON:0003528!1.25e-16!34;UBERON:0000073!3.28e-16!94;UBERON:0001016!3.28e-16!94;UBERON:0002791!3.55e-16!33;UBERON:0001869!1.54e-15!32;UBERON:0002619!7.32e-15!22;UBERON:0006914!5.06e-14!25;UBERON:0001950!1.86e-13!20;UBERON:0003056!8.81e-13!61;UBERON:0000956!2.11e-12!25;UBERON:0000203!2.11e-12!25;UBERON:0000055!9.78e-12!69;UBERON:0003915!1.66e-11!9;UBERON:0004700!1.66e-11!9;UBERON:0001917!1.66e-11!9;UBERON:0000153!2.61e-11!129;UBERON:0007811!2.61e-11!129;UBERON:0000483!6.51e-11!309;UBERON:0000119!1.48e-10!312;UBERON:0000033!5.35e-10!123;UBERON:0002465!1.30e-09!10;UBERON:0002049!6.55e-09!79;UBERON:0007798!6.55e-09!79;UBERON:0000468!1.48e-08!659;UBERON:0004121!2.70e-08!169;UBERON:0001473!4.91e-08!8;UBERON:0004536!4.91e-08!8;UBERON:0006558!4.91e-08!8;UBERON:0004872!5.00e-08!84;UBERON:0000467!6.79e-08!625;UBERON:0000480!8.13e-08!626;UBERON:0000064!8.55e-08!219;UBERON:0001981!8.96e-08!60;UBERON:0007500!8.96e-08!60;UBERON:0004537!8.96e-08!60;UBERON:0006965!8.96e-08!60;UBERON:0000924!9.33e-08!173;UBERON:0006601!9.33e-08!173;UBERON:0002298!1.46e-07!8;UBERON:0001009!1.53e-07!113;UBERON:0001638!4.16e-07!9;UBERON:0003920!4.16e-07!9;UBERON:0004582!4.16e-07!9;UBERON:0001871!7.56e-07!7 | ||
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| ||
|short_description=p4@VWF | |short_description=p4@VWF | ||
}} | }} |
Latest revision as of 17:55, 19 September 2015
Short description: | p4@VWF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_VWF_5end |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | 59bp_to_ENST00000540192_5end |
EntrezGene: | VWF |
HGNC: | 12726 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.44e-34 | 24 |
endothelial cell | 6.41e-33 | 36 |
blood vessel endothelial cell | 2.70e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.70e-25 | 18 |
meso-epithelial cell | 4.99e-24 | 45 |
lining cell | 3.30e-16 | 58 |
barrier cell | 3.30e-16 | 58 |
endothelial cell of artery | 5.32e-13 | 9 |
lymphangioblast | 3.13e-10 | 6 |
endothelial cell of lymphatic vessel | 3.13e-10 | 6 |
vascular lymphangioblast | 3.13e-10 | 6 |
vein endothelial cell | 1.00e-09 | 6 |
aortic endothelial cell | 2.61e-09 | 6 |