FFCP PHASE1:Mm9::chr11:106022022..106022035,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67803 | |EntrezGene=67803 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1224 | |MCL_coexpression_id=1224 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_uc007lye.1_5end | |association_with_transcript=7bp_to_uc007lye.1_5end | ||
|cluster_id=chr11:106022022..106022035,- | |||
|description=CAGE_peak_11_at_Limd2_5end | |description=CAGE_peak_11_at_Limd2_5end | ||
|id=chr11:106022022..106022035,- | |id=chr11:106022022..106022035,- | ||
|ontology_enrichment_celltype=CL:0000988!1.01e-08!32;CL:0002032!1.01e-08!32;CL:0000037!1.01e-08!32;CL:0000566!1.01e-08!32;CL:0000837!1.01e-08!32;CL:0000838!1.76e-07!12;CL:0000084!9.85e-07!11;CL:0000827!9.85e-07!11 | |ontology_enrichment_celltype=CL:0000988!1.01e-08!32;CL:0002032!1.01e-08!32;CL:0000037!1.01e-08!32;CL:0000566!1.01e-08!32;CL:0000837!1.01e-08!32;CL:0000838!1.76e-07!12;CL:0000084!9.85e-07!11;CL:0000827!9.85e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.08e-16,32;CL:0002032,2.08e-16,32;CL:0000037,2.08e-16,32;CL:0000837,2.08e-16,32;CL:0002031,3.55e-11,25;CL:0002320,6.65e-11,46;CL:0000134,6.65e-11,46;CL:0000838,7.70e-10,12;CL:0000542,4.54e-09,13;CL:0000051,4.54e-09,13;CL:0000219,4.91e-09,54;CL:0000791,6.50e-09,9;CL:0000789,6.50e-09,9;CL:0002420,6.50e-09,9;CL:0002419,6.50e-09,9;CL:0000790,6.50e-09,9;CL:0000049,1.25e-08,19;CL:0000553,1.35e-07,6;CL:0000556,1.35e-07,6;CL:0000034,1.69e-07,97;CL:0000084,2.61e-07,11;CL:0000827,2.61e-07,11;CL:0000763,2.82e-07,16;CL:0000738,6.89e-07,17;CL:0002087,6.89e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.73e-15!48;UBERON:0002390!7.05e-14!45;UBERON:0003061!7.05e-14!45;UBERON:0004177!7.36e-14!29;UBERON:0002370!2.30e-11!23;UBERON:0000974!2.30e-11!23;UBERON:0004807!2.30e-11!23;UBERON:0005058!2.30e-11!23;UBERON:0003351!2.30e-11!23;UBERON:0009113!2.30e-11!23;UBERON:0003295!2.30e-11!23;UBERON:0009722!2.30e-11!23;UBERON:0005562!2.30e-11!23;UBERON:0007690!2.30e-11!23;UBERON:0006562!1.49e-10!24;UBERON:0003408!1.49e-10!24;UBERON:0001557!1.49e-10!24;UBERON:0001042!1.49e-10!24;UBERON:0008814!1.49e-10!24;UBERON:0009145!1.49e-10!24;UBERON:0002405!5.45e-09!70;UBERON:0000072!1.61e-08!27;UBERON:0003081!1.41e-07!88 | |ontology_enrichment_uberon=UBERON:0002193!4.73e-15!48;UBERON:0002390!7.05e-14!45;UBERON:0003061!7.05e-14!45;UBERON:0004177!7.36e-14!29;UBERON:0002370!2.30e-11!23;UBERON:0000974!2.30e-11!23;UBERON:0004807!2.30e-11!23;UBERON:0005058!2.30e-11!23;UBERON:0003351!2.30e-11!23;UBERON:0009113!2.30e-11!23;UBERON:0003295!2.30e-11!23;UBERON:0009722!2.30e-11!23;UBERON:0005562!2.30e-11!23;UBERON:0007690!2.30e-11!23;UBERON:0006562!1.49e-10!24;UBERON:0003408!1.49e-10!24;UBERON:0001557!1.49e-10!24;UBERON:0001042!1.49e-10!24;UBERON:0008814!1.49e-10!24;UBERON:0009145!1.49e-10!24;UBERON:0002405!5.45e-09!70;UBERON:0000072!1.61e-08!27;UBERON:0003081!1.41e-07!88 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.73e-13,45;UBERON:0003061,4.73e-13,45;UBERON:0002193,4.03e-12,48;UBERON:0002405,4.03e-12,48;UBERON:0002384,6.65e-11,46;UBERON:0002370,4.30e-09,23;UBERON:0000974,4.30e-09,23;UBERON:0004807,4.30e-09,23;UBERON:0005058,4.30e-09,23;UBERON:0003351,4.30e-09,23;UBERON:0009113,4.30e-09,23;UBERON:0003295,4.30e-09,23;UBERON:0009722,4.30e-09,23;UBERON:0005562,4.30e-09,23;UBERON:0007690,4.30e-09,23;UBERON:0006562,1.10e-08,24;UBERON:0003408,1.10e-08,24;UBERON:0001557,1.10e-08,24;UBERON:0001042,1.10e-08,24;UBERON:0008814,1.10e-08,24;UBERON:0009145,1.10e-08,24;UBERON:0000072,1.22e-07,27;UBERON:0002371,2.82e-07,16;UBERON:0004177,4.63e-07,29;UBERON:0005057,4.63e-07,29 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,1.29123323441576,0.281577444303333,0.234064526321993,0.34243593645101,0.319088635981346,1.88320802924326,2.01066925563694,0.333109761815663,1.21485160433896,0,1.73504190947031,1.37114433605739,0.42438965179803,0.17008658030214,0.992909512008853,0.522399578277871,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0.139986421625363,0,1.00669563634642,0,5.71359458542189,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0.420649922702764,0,0.441737081903227,0.122490799214954,0.287536413054709,0,0,0,0,0.263772575460388,0.365950574409639,0,0,0,0,0,0,0.372798891650601,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0,0.776813650941515,0,0,0.304465478312141,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0,2.03685711660064,0.599902730993408,0.889491589511453,0,0,0.251308704225729,0,0,0,0,0.203678727700633,0.248813941220186,0,0,0.260240885925407,0.459804208866946,0.900310649026746,0.150704817835715,0,0,0.187403449119458,0,0.431135985865684,0.378212160335639,0.527853372491847,0.43839146485515,0,0,0,0.199034266818493,2.1066395619397,1.28673953557358,0.852490498186778,0.207125772535502,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0,0,0.308713837137853,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0.494096864172033,0,0,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.757965647081939,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0.632073515871632,0,0,0,0.720244376125241,0.258717367565509,0,0.177340233642274,0,0,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0.512612642393558,0.412773735926445,0.185194527369712,0.376736914009382,0.136694227721025,0.457556346413045,2.88963330989554,1.6794174278839,1.65839968565309,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0,0,0.576060012515731,0.316011120628178,0.608175645870493,0.718976700153791,1.16928740680016,0.358053391334963,0.596044064343795,1.20195449519969,1.32920574457119,1.00966449948148,1.06689529317,0.907435666231565,0.487289403698762,0.962118416403295,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.726511433089237,0.399024873401031,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0.355905054372522,0.29551344712669,0,0,0,0,0.233931608445408,0,0,0,0.231867835620421 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,1.29123323441576,0.281577444303333,0.234064526321993,0.34243593645101,0.319088635981346,1.88320802924326,2.01066925563694,0.333109761815663,1.21485160433896,0,1.73504190947031,1.37114433605739,0.42438965179803,0.17008658030214,0.992909512008853,0.522399578277871,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0.139986421625363,0,1.00669563634642,0,5.71359458542189,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0.420649922702764,0,0.441737081903227,0.122490799214954,0.287536413054709,0,0,0,0,0.263772575460388,0.365950574409639,0,0,0,0,0,0,0.372798891650601,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0,0.776813650941515,0,0,0.304465478312141,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0,2.03685711660064,0.599902730993408,0.889491589511453,0,0,0.251308704225729,0,0,0,0,0.203678727700633,0.248813941220186,0,0,0.260240885925407,0.459804208866946,0.900310649026746,0.150704817835715,0,0,0.187403449119458,0,0.431135985865684,0.378212160335639,0.527853372491847,0.43839146485515,0,0,0,0.199034266818493,2.1066395619397,1.28673953557358,0.852490498186778,0.207125772535502,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0,0,0.308713837137853,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0.494096864172033,0,0,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.757965647081939,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0.632073515871632,0,0,0,0.720244376125241,0.258717367565509,0,0.177340233642274,0,0,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0.512612642393558,0.412773735926445,0.185194527369712,0.376736914009382,0.136694227721025,0.457556346413045,2.88963330989554,1.6794174278839,1.65839968565309,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0,0,0.576060012515731,0.316011120628178,0.608175645870493,0.718976700153791,1.16928740680016,0.358053391334963,0.596044064343795,1.20195449519969,1.32920574457119,1.00966449948148,1.06689529317,0.907435666231565,0.487289403698762,0.962118416403295,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.726511433089237,0.399024873401031,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0.355905054372522,0.29551344712669,0,0,0,0,0.233931608445408,0,0,0,0.231867835620421 | ||
|short_description=p11@Limd2 | |short_description=p11@Limd2 | ||
}} | }} |
Latest revision as of 20:06, 26 September 2015
Short description: | p11@Limd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Limd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1224 |
Association with transcript: | 7bp_to_uc007lye.1_5end |
EntrezGene: | Limd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.08e-16 | 32 |
hematopoietic oligopotent progenitor cell | 2.08e-16 | 32 |
hematopoietic stem cell | 2.08e-16 | 32 |
hematopoietic multipotent progenitor cell | 2.08e-16 | 32 |
hematopoietic lineage restricted progenitor cell | 3.55e-11 | 25 |
connective tissue cell | 6.65e-11 | 46 |
mesenchymal cell | 6.65e-11 | 46 |
lymphoid lineage restricted progenitor cell | 7.70e-10 | 12 |
lymphocyte | 4.54e-09 | 13 |
common lymphoid progenitor | 4.54e-09 | 13 |
motile cell | 4.91e-09 | 54 |
mature alpha-beta T cell | 6.50e-09 | 9 |
alpha-beta T cell | 6.50e-09 | 9 |
immature T cell | 6.50e-09 | 9 |
mature T cell | 6.50e-09 | 9 |
immature alpha-beta T cell | 6.50e-09 | 9 |
common myeloid progenitor | 1.25e-08 | 19 |
megakaryocyte progenitor cell | 1.35e-07 | 6 |
megakaryocyte | 1.35e-07 | 6 |
stem cell | 1.69e-07 | 97 |
T cell | 2.61e-07 | 11 |
pro-T cell | 2.61e-07 | 11 |
myeloid cell | 2.82e-07 | 16 |
leukocyte | 6.89e-07 | 17 |
nongranular leukocyte | 6.89e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.73e-13 | 45 |
blood island | 4.73e-13 | 45 |
hemolymphoid system | 4.03e-12 | 48 |
immune system | 4.03e-12 | 48 |
connective tissue | 6.65e-11 | 46 |
thymus | 4.30e-09 | 23 |
neck | 4.30e-09 | 23 |
respiratory system epithelium | 4.30e-09 | 23 |
hemolymphoid system gland | 4.30e-09 | 23 |
pharyngeal epithelium | 4.30e-09 | 23 |
thymic region | 4.30e-09 | 23 |
pharyngeal gland | 4.30e-09 | 23 |
entire pharyngeal arch endoderm | 4.30e-09 | 23 |
thymus primordium | 4.30e-09 | 23 |
early pharyngeal endoderm | 4.30e-09 | 23 |
pharynx | 1.10e-08 | 24 |
gland of gut | 1.10e-08 | 24 |
upper respiratory tract | 1.10e-08 | 24 |
chordate pharynx | 1.10e-08 | 24 |
pharyngeal arch system | 1.10e-08 | 24 |
pharyngeal region of foregut | 1.10e-08 | 24 |
segment of respiratory tract | 1.22e-07 | 27 |
bone marrow | 2.82e-07 | 16 |
hemopoietic organ | 4.63e-07 | 29 |
immune organ | 4.63e-07 | 29 |