FFCP PHASE1:Mm9::chr16:18630186..18630232,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18951 | |EntrezGene=18951 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |MCL_coexpression_id=13 | ||
|TSSclassifier=NA | |||
|UniProt=Q9Z2Q6,B7ZNM7 | |UniProt=Q9Z2Q6,B7ZNM7 | ||
|association_with_transcript=-155bp_to_NM_213614,uc007yoj.1,uc012acj.1,uc012ack.1_5end | |association_with_transcript=-155bp_to_NM_213614,uc007yoj.1,uc012acj.1,uc012ack.1_5end | ||
|cluster_id=chr16:18630186..18630232,- | |||
|description=CAGE_peak_3_at_Sept5_5end | |description=CAGE_peak_3_at_Sept5_5end | ||
|id=chr16:18630186..18630232,- | |id=chr16:18630186..18630232,- | ||
|ontology_enrichment_celltype=CL:0000117!1.84e-14!23;CL:0000337!1.84e-14!23;CL:0000540!3.95e-11!33;CL:0000047!3.95e-11!33;CL:0000031!3.95e-11!33;CL:0000404!3.95e-11!33;CL:0000393!2.91e-10!39;CL:0000211!2.91e-10!39;CL:0000221!5.04e-08!44;CL:0000133!5.04e-08!44;CL:0002319!9.23e-08!43;CL:0000055!5.09e-07!50 | |ontology_enrichment_celltype=CL:0000117!1.84e-14!23;CL:0000337!1.84e-14!23;CL:0000540!3.95e-11!33;CL:0000047!3.95e-11!33;CL:0000031!3.95e-11!33;CL:0000404!3.95e-11!33;CL:0000393!2.91e-10!39;CL:0000211!2.91e-10!39;CL:0000221!5.04e-08!44;CL:0000133!5.04e-08!44;CL:0002319!9.23e-08!43;CL:0000055!5.09e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.48e-35,23;CL:0000337,1.48e-35,23;CL:0000540,6.57e-23,33;CL:0000047,6.57e-23,33;CL:0000031,6.57e-23,33;CL:0000404,6.57e-23,33;CL:0000393,1.89e-18,39;CL:0000211,1.89e-18,39;CL:0002319,3.54e-16,43;CL:0000221,1.13e-15,44;CL:0000133,1.13e-15,44;CL:0002609,1.84e-11,6;CL:0002321,9.51e-08,70;CL:0002613,2.67e-07,3;CL:0000120,5.02e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!7.87e-21!49;UBERON:0002020!9.82e-21!34;UBERON:0001049!5.64e-20!52;UBERON:0005068!5.64e-20!52;UBERON:0006241!5.64e-20!52;UBERON:0007135!5.64e-20!52;UBERON:0001017!1.22e-19!73;UBERON:0005743!1.22e-19!73;UBERON:0000033!1.26e-19!63;UBERON:0003080!8.77e-19!40;UBERON:0000073!2.44e-18!75;UBERON:0001016!2.44e-18!75;UBERON:0002346!2.56e-18!71;UBERON:0003075!2.56e-18!71;UBERON:0007284!2.56e-18!71;UBERON:0002780!2.78e-18!39;UBERON:0001890!2.78e-18!39;UBERON:0006240!2.78e-18!39;UBERON:0000955!1.31e-17!50;UBERON:0006238!1.31e-17!50;UBERON:0002791!2.58e-17!29;UBERON:0003528!2.58e-17!29;UBERON:0001893!2.58e-17!29;UBERON:0002616!3.89e-17!49;UBERON:0004121!2.99e-16!102;UBERON:0000924!2.99e-16!102;UBERON:0006601!2.99e-16!102;UBERON:0000956!3.31e-12!21;UBERON:0001869!3.31e-12!21;UBERON:0000203!3.31e-12!21;UBERON:0002619!1.26e-09!17;UBERON:0007811!2.32e-09!86;UBERON:0000153!2.54e-09!94;UBERON:0002021!2.75e-08!10;UBERON:0000411!2.75e-08!10;UBERON:0001950!2.75e-08!10 | |ontology_enrichment_uberon=UBERON:0003056!7.87e-21!49;UBERON:0002020!9.82e-21!34;UBERON:0001049!5.64e-20!52;UBERON:0005068!5.64e-20!52;UBERON:0006241!5.64e-20!52;UBERON:0007135!5.64e-20!52;UBERON:0001017!1.22e-19!73;UBERON:0005743!1.22e-19!73;UBERON:0000033!1.26e-19!63;UBERON:0003080!8.77e-19!40;UBERON:0000073!2.44e-18!75;UBERON:0001016!2.44e-18!75;UBERON:0002346!2.56e-18!71;UBERON:0003075!2.56e-18!71;UBERON:0007284!2.56e-18!71;UBERON:0002780!2.78e-18!39;UBERON:0001890!2.78e-18!39;UBERON:0006240!2.78e-18!39;UBERON:0000955!1.31e-17!50;UBERON:0006238!1.31e-17!50;UBERON:0002791!2.58e-17!29;UBERON:0003528!2.58e-17!29;UBERON:0001893!2.58e-17!29;UBERON:0002616!3.89e-17!49;UBERON:0004121!2.99e-16!102;UBERON:0000924!2.99e-16!102;UBERON:0006601!2.99e-16!102;UBERON:0000956!3.31e-12!21;UBERON:0001869!3.31e-12!21;UBERON:0000203!3.31e-12!21;UBERON:0002619!1.26e-09!17;UBERON:0007811!2.32e-09!86;UBERON:0000153!2.54e-09!94;UBERON:0002021!2.75e-08!10;UBERON:0000411!2.75e-08!10;UBERON:0001950!2.75e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.12e-48,34;UBERON:0003528,1.02e-39,29;UBERON:0002791,1.02e-39,29;UBERON:0001893,1.02e-39,29;UBERON:0000073,2.12e-35,54;UBERON:0001049,9.70e-33,52;UBERON:0005068,9.70e-33,52;UBERON:0006241,9.70e-33,52;UBERON:0007135,9.70e-33,52;UBERON:0003080,3.74e-31,40;UBERON:0002780,5.82e-30,39;UBERON:0001890,5.82e-30,39;UBERON:0006240,5.82e-30,39;UBERON:0001017,1.30e-29,73;UBERON:0001016,1.45e-28,75;UBERON:0002346,1.50e-28,64;UBERON:0003075,1.50e-28,64;UBERON:0007284,1.50e-28,64;UBERON:0003056,5.65e-28,49;UBERON:0000956,8.55e-27,21;UBERON:0001869,8.55e-27,21;UBERON:0000203,8.55e-27,21;UBERON:0002616,4.37e-26,46;UBERON:0000955,2.29e-25,47;UBERON:0006238,2.29e-25,47;UBERON:0010371,6.62e-24,73;UBERON:0004121,2.63e-23,95;UBERON:0000924,2.63e-23,95;UBERON:0006601,2.63e-23,95;UBERON:0002619,2.56e-20,17;UBERON:0002021,1.42e-18,10;UBERON:0000411,1.42e-18,10;UBERON:0001950,1.42e-18,10;UBERON:0010314,4.24e-17,92;UBERON:0002420,1.00e-13,8;UBERON:0007245,1.00e-13,8;UBERON:0010009,1.00e-13,8;UBERON:0010011,1.00e-13,8;UBERON:0000454,1.00e-13,8;UBERON:0000025,2.90e-10,114;UBERON:0000369,5.35e-10,5;UBERON:0002435,5.35e-10,5;UBERON:0000204,5.35e-10,5;UBERON:0010082,5.35e-10,5;UBERON:0001948,1.81e-09,5;UBERON:0002315,1.81e-09,5;UBERON:0004111,4.73e-09,122;UBERON:0002240,8.28e-08,6;UBERON:0005174,8.28e-08,6;UBERON:0001137,8.28e-08,6 | |||
|phase1_expression=0.480446541314382,0,0.454999239389536,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0.68822784320151,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0.971020706062307,0.125896817975577,0.101376931219515,0.367093504323363,0,0.436050312760893,0.219686182734472,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0.515672092277442,7.48570905180512,8.99284664762456,6.97214543856797,0,0,0,0,0,0,0.768436610643109,4.25127410464758,5.8052553482627,5.46844899513593,7.14127461009509,6.84692476950002,6.00204916153275,5.17565543498476,8.27296907949019,0,1.27687338085188,1.53606533256243,8.44072241473241,12.3508318863253,9.37644067002168,1.3959149950069,1.12552522006336,1.83357897332172,2.94628585473668,3.98640706237488,3.91438836233131,0,0,0,0,0,0,0,0,0,0.511290967734173,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0,0.352766121407114,0,0.741584903203122,0,0,0.647067399789637,0,0,0,0,0,0,0,0,0,1.04853447583376,1.37250180845588,4.02093926761166,4.34560800480691,6.13717097592793,1.66230435647648,0.973447578406546,0.305518091550949,0,0,0,0.910843100738926,1.60931473103431,2.34080768746954,0.753524089178575,0.816437989815934,0.384341160854549,0.749613796477831,0.517406741478031,0.431135985865684,0.756424320671277,0.175951124163949,1.09597866213787,0.556094498451196,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0.308534225774757,0,0,0.350296027101508,0.16455984991348,0,0,0.292399974850665,0,0,0.630869845692382,6.17427674275707,0,0.264450566663544,0.639864751605702,0.232236671860439,0.77320476793256,0,0,0.190225626112559,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0.758671603812327,0.228497025219458,0,0.203651327845314,0,0.280543279561274,0.189709611372772,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0.325929952884052,0.339490171550376,0.234690248288502,0.502518772325447,0.476087281772027,0,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0,0.481651769963376,0.937693492737625,0.163934945376675,0.252470927204373,0.631016438832513,0,0.215423397732799,0.477937595905104,0.668396022247182,0,0,0.292255857911312,0,0.963963949265421,0,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0,0.720244376125241,0.905510786479282,0.643011105094777,0.354680467284547,0.356737635204141,0.493647061806363,0.304464949114599,0.938686832254841,0.847328283455281,0.220528398054962,0,0,0.0603129249281559,0.238744688006273,0.164140899745061,0,0.18542530201051,0,0.412773735926445,0,0,0,0,0,0,0,0,1.58167996790568,0.406638934253697,0.432021363287205,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.448549638131936,0.330916980914195,0.583353565032143,0,0,0.117357238645754,0.2604087696879,0.314578033277133,0,0,0,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.179427713218951,0.335769232728157,0,0,0,0,0,10.1655331671072,12.4287813856938,9.16632821503035,8.59265911718438,5.48066015816514,6.7985450765073,4.72515750162264,3.60256962579376,4.07828168085784,3.10656187051092,1.24544817101012,1.19707462020309,0.853668028770671,0,0.838452650511929,0.919217542250071,0.888986911206461,0.412070114477788,0.962757628775446,1.26348605881899,0.25347929989024,0.565879024158229,0.749132059759059,0.960377286073039,0.574354689556133,1.42888107384922,0.927074607558844,0.964546102318525,1.23625770240992,0.883193520806384,0.685738504770831,0.70990322463735,0.476872379894642,0.726732083161643,0.658765662907314,0.846146078916765,1.09756783723664,0.789209134313529,0.814824683075171,0.561142271657738,0.711810108745045,0.985044823755635,0.409231043169689,0.77468420592983,1.15743966588685,2.74791635731741,0,0.429742108096597,0,0,0.463735671240843 | |phase1_expression=0.480446541314382,0,0.454999239389536,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0.68822784320151,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0.971020706062307,0.125896817975577,0.101376931219515,0.367093504323363,0,0.436050312760893,0.219686182734472,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0.515672092277442,7.48570905180512,8.99284664762456,6.97214543856797,0,0,0,0,0,0,0.768436610643109,4.25127410464758,5.8052553482627,5.46844899513593,7.14127461009509,6.84692476950002,6.00204916153275,5.17565543498476,8.27296907949019,0,1.27687338085188,1.53606533256243,8.44072241473241,12.3508318863253,9.37644067002168,1.3959149950069,1.12552522006336,1.83357897332172,2.94628585473668,3.98640706237488,3.91438836233131,0,0,0,0,0,0,0,0,0,0.511290967734173,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0,0.352766121407114,0,0.741584903203122,0,0,0.647067399789637,0,0,0,0,0,0,0,0,0,1.04853447583376,1.37250180845588,4.02093926761166,4.34560800480691,6.13717097592793,1.66230435647648,0.973447578406546,0.305518091550949,0,0,0,0.910843100738926,1.60931473103431,2.34080768746954,0.753524089178575,0.816437989815934,0.384341160854549,0.749613796477831,0.517406741478031,0.431135985865684,0.756424320671277,0.175951124163949,1.09597866213787,0.556094498451196,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0.308534225774757,0,0,0.350296027101508,0.16455984991348,0,0,0.292399974850665,0,0,0.630869845692382,6.17427674275707,0,0.264450566663544,0.639864751605702,0.232236671860439,0.77320476793256,0,0,0.190225626112559,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0.758671603812327,0.228497025219458,0,0.203651327845314,0,0.280543279561274,0.189709611372772,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0.325929952884052,0.339490171550376,0.234690248288502,0.502518772325447,0.476087281772027,0,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0,0.481651769963376,0.937693492737625,0.163934945376675,0.252470927204373,0.631016438832513,0,0.215423397732799,0.477937595905104,0.668396022247182,0,0,0.292255857911312,0,0.963963949265421,0,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0,0.720244376125241,0.905510786479282,0.643011105094777,0.354680467284547,0.356737635204141,0.493647061806363,0.304464949114599,0.938686832254841,0.847328283455281,0.220528398054962,0,0,0.0603129249281559,0.238744688006273,0.164140899745061,0,0.18542530201051,0,0.412773735926445,0,0,0,0,0,0,0,0,1.58167996790568,0.406638934253697,0.432021363287205,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.448549638131936,0.330916980914195,0.583353565032143,0,0,0.117357238645754,0.2604087696879,0.314578033277133,0,0,0,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.179427713218951,0.335769232728157,0,0,0,0,0,10.1655331671072,12.4287813856938,9.16632821503035,8.59265911718438,5.48066015816514,6.7985450765073,4.72515750162264,3.60256962579376,4.07828168085784,3.10656187051092,1.24544817101012,1.19707462020309,0.853668028770671,0,0.838452650511929,0.919217542250071,0.888986911206461,0.412070114477788,0.962757628775446,1.26348605881899,0.25347929989024,0.565879024158229,0.749132059759059,0.960377286073039,0.574354689556133,1.42888107384922,0.927074607558844,0.964546102318525,1.23625770240992,0.883193520806384,0.685738504770831,0.70990322463735,0.476872379894642,0.726732083161643,0.658765662907314,0.846146078916765,1.09756783723664,0.789209134313529,0.814824683075171,0.561142271657738,0.711810108745045,0.985044823755635,0.409231043169689,0.77468420592983,1.15743966588685,2.74791635731741,0,0.429742108096597,0,0,0.463735671240843 | ||
|short_description=p3@Sept5 | |short_description=p3@Sept5 | ||
}} | }} |
Latest revision as of 17:19, 1 October 2015
Short description: | p3@Sept5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sept5_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -155bp_to_NM_213614, uc007yoj.1, uc012acj.1, uc012ack.1_5end |
EntrezGene: | Sept5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.48e-35 | 23 |
neuroblast (sensu Vertebrata) | 1.48e-35 | 23 |
neuron | 6.57e-23 | 33 |
neuronal stem cell | 6.57e-23 | 33 |
neuroblast | 6.57e-23 | 33 |
electrically signaling cell | 6.57e-23 | 33 |
electrically responsive cell | 1.89e-18 | 39 |
electrically active cell | 1.89e-18 | 39 |
neural cell | 3.54e-16 | 43 |
ectodermal cell | 1.13e-15 | 44 |
neurectodermal cell | 1.13e-15 | 44 |
neuron of cerebral cortex | 1.84e-11 | 6 |
embryonic cell | 9.51e-08 | 70 |
striatum neuron | 2.67e-07 | 3 |
granule cell | 5.02e-07 | 3 |