FFCP PHASE1:Mm9::chr2:58009610..58009638,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=21 | |MCL_coexpression_id=21 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:58009610..58009638,+ | |||
|description=CAGE_peak_at_chr2:58009610..58009638,+ | |description=CAGE_peak_at_chr2:58009610..58009638,+ | ||
|id=chr2:58009610..58009638,+ | |id=chr2:58009610..58009638,+ | ||
|ontology_enrichment_celltype=CL:0000838!7.40e-22!12;CL:0000988!7.80e-22!32;CL:0002032!7.80e-22!32;CL:0000037!7.80e-22!32;CL:0000566!7.80e-22!32;CL:0000837!7.80e-22!32;CL:0000084!5.88e-20!11;CL:0000827!5.88e-20!11;CL:0000542!6.35e-20!13;CL:0000051!6.35e-20!13;CL:0002031!2.28e-19!25;CL:0000791!1.42e-17!9;CL:0000789!1.42e-17!9;CL:0002420!1.42e-17!9;CL:0002419!1.42e-17!9;CL:0000790!1.42e-17!9;CL:0000624!7.70e-16!8;CL:0000738!1.79e-14!17;CL:0002087!1.79e-14!17;CL:0002320!2.23e-13!46;CL:0000134!2.23e-13!46;CL:0000893!3.99e-12!6;CL:0002489!3.99e-12!6;CL:0000898!3.99e-12!6;CL:0000809!3.99e-12!6;CL:0000810!3.99e-12!6;CL:0000895!3.99e-12!6;CL:0000808!3.99e-12!6;CL:0000894!3.99e-12!6;CL:0000806!3.99e-12!6;CL:0000807!3.99e-12!6;CL:0000805!3.99e-12!6;CL:0002425!3.99e-12!6;CL:0002436!3.99e-12!6;CL:0002427!3.99e-12!6;CL:0002428!3.99e-12!6;CL:0002429!3.99e-12!6;CL:0002433!3.99e-12!6;CL:0002431!3.99e-12!6;CL:0002432!3.99e-12!6;CL:0000219!1.19e-11!54;CL:0000553!1.79e-08!6;CL:0000556!1.79e-08!6;CL:0000063!1.22e-07!66 | |ontology_enrichment_celltype=CL:0000838!7.40e-22!12;CL:0000988!7.80e-22!32;CL:0002032!7.80e-22!32;CL:0000037!7.80e-22!32;CL:0000566!7.80e-22!32;CL:0000837!7.80e-22!32;CL:0000084!5.88e-20!11;CL:0000827!5.88e-20!11;CL:0000542!6.35e-20!13;CL:0000051!6.35e-20!13;CL:0002031!2.28e-19!25;CL:0000791!1.42e-17!9;CL:0000789!1.42e-17!9;CL:0002420!1.42e-17!9;CL:0002419!1.42e-17!9;CL:0000790!1.42e-17!9;CL:0000624!7.70e-16!8;CL:0000738!1.79e-14!17;CL:0002087!1.79e-14!17;CL:0002320!2.23e-13!46;CL:0000134!2.23e-13!46;CL:0000893!3.99e-12!6;CL:0002489!3.99e-12!6;CL:0000898!3.99e-12!6;CL:0000809!3.99e-12!6;CL:0000810!3.99e-12!6;CL:0000895!3.99e-12!6;CL:0000808!3.99e-12!6;CL:0000894!3.99e-12!6;CL:0000806!3.99e-12!6;CL:0000807!3.99e-12!6;CL:0000805!3.99e-12!6;CL:0002425!3.99e-12!6;CL:0002436!3.99e-12!6;CL:0002427!3.99e-12!6;CL:0002428!3.99e-12!6;CL:0002429!3.99e-12!6;CL:0002433!3.99e-12!6;CL:0002431!3.99e-12!6;CL:0002432!3.99e-12!6;CL:0000219!1.19e-11!54;CL:0000553!1.79e-08!6;CL:0000556!1.79e-08!6;CL:0000063!1.22e-07!66 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.38e-40,9;CL:0000789,6.38e-40,9;CL:0002420,6.38e-40,9;CL:0002419,6.38e-40,9;CL:0000790,6.38e-40,9;CL:0002031,1.01e-38,25;CL:0000838,7.74e-37,12;CL:0000624,9.60e-36,8;CL:0000542,6.76e-34,13;CL:0000051,6.76e-34,13;CL:0000084,1.87e-32,11;CL:0000827,1.87e-32,11;CL:0000988,9.43e-30,32;CL:0002032,9.43e-30,32;CL:0000037,9.43e-30,32;CL:0000837,9.43e-30,32;CL:0000893,8.12e-27,6;CL:0002489,8.12e-27,6;CL:0000898,8.12e-27,6;CL:0000809,8.12e-27,6;CL:0000810,8.12e-27,6;CL:0000895,8.12e-27,6;CL:0000808,8.12e-27,6;CL:0000894,8.12e-27,6;CL:0000806,8.12e-27,6;CL:0000807,8.12e-27,6;CL:0000805,8.12e-27,6;CL:0002425,8.12e-27,6;CL:0002436,8.12e-27,6;CL:0002427,8.12e-27,6;CL:0002428,8.12e-27,6;CL:0002429,8.12e-27,6;CL:0002433,8.12e-27,6;CL:0002431,8.12e-27,6;CL:0002432,8.12e-27,6;CL:0000738,1.38e-25,17;CL:0002087,1.38e-25,17;CL:0002320,5.57e-20,46;CL:0000134,5.57e-20,46;CL:0000553,1.12e-18,6;CL:0000556,1.12e-18,6;CL:0000219,1.16e-16,54;CL:0000050,2.06e-12,9;CL:0000034,7.15e-11,97;CL:0000723,7.08e-09,91;CL:0000048,7.08e-09,91;CL:0000839,1.54e-08,13;CL:0000763,6.73e-07,16 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.20e-21!48;UBERON:0002390!2.20e-19!45;UBERON:0003061!2.20e-19!45;UBERON:0004177!7.76e-18!29;UBERON:0002370!6.08e-17!23;UBERON:0000974!6.08e-17!23;UBERON:0004807!6.08e-17!23;UBERON:0005058!6.08e-17!23;UBERON:0003351!6.08e-17!23;UBERON:0009113!6.08e-17!23;UBERON:0003295!6.08e-17!23;UBERON:0009722!6.08e-17!23;UBERON:0005562!6.08e-17!23;UBERON:0007690!6.08e-17!23;UBERON:0006562!4.68e-16!24;UBERON:0003408!4.68e-16!24;UBERON:0001557!4.68e-16!24;UBERON:0001042!4.68e-16!24;UBERON:0008814!4.68e-16!24;UBERON:0009145!4.68e-16!24;UBERON:0000072!8.52e-14!27;UBERON:0002384!2.23e-13!46;UBERON:0002405!2.87e-12!70;UBERON:0000063!1.08e-09!35;UBERON:0000065!8.47e-09!41;UBERON:0001004!1.73e-08!42;UBERON:0003081!2.48e-08!88;UBERON:0005057!5.00e-08!51 | |ontology_enrichment_uberon=UBERON:0002193!3.20e-21!48;UBERON:0002390!2.20e-19!45;UBERON:0003061!2.20e-19!45;UBERON:0004177!7.76e-18!29;UBERON:0002370!6.08e-17!23;UBERON:0000974!6.08e-17!23;UBERON:0004807!6.08e-17!23;UBERON:0005058!6.08e-17!23;UBERON:0003351!6.08e-17!23;UBERON:0009113!6.08e-17!23;UBERON:0003295!6.08e-17!23;UBERON:0009722!6.08e-17!23;UBERON:0005562!6.08e-17!23;UBERON:0007690!6.08e-17!23;UBERON:0006562!4.68e-16!24;UBERON:0003408!4.68e-16!24;UBERON:0001557!4.68e-16!24;UBERON:0001042!4.68e-16!24;UBERON:0008814!4.68e-16!24;UBERON:0009145!4.68e-16!24;UBERON:0000072!8.52e-14!27;UBERON:0002384!2.23e-13!46;UBERON:0002405!2.87e-12!70;UBERON:0000063!1.08e-09!35;UBERON:0000065!8.47e-09!41;UBERON:0001004!1.73e-08!42;UBERON:0003081!2.48e-08!88;UBERON:0005057!5.00e-08!51 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.57e-20,46;UBERON:0002193,1.29e-13,48;UBERON:0002405,1.29e-13,48;UBERON:0002390,1.83e-12,45;UBERON:0003061,1.83e-12,45;UBERON:0002370,7.89e-09,23;UBERON:0000974,7.89e-09,23;UBERON:0004807,7.89e-09,23;UBERON:0005058,7.89e-09,23;UBERON:0003351,7.89e-09,23;UBERON:0009113,7.89e-09,23;UBERON:0003295,7.89e-09,23;UBERON:0009722,7.89e-09,23;UBERON:0005562,7.89e-09,23;UBERON:0007690,7.89e-09,23;UBERON:0006562,1.98e-08,24;UBERON:0003408,1.98e-08,24;UBERON:0001557,1.98e-08,24;UBERON:0001042,1.98e-08,24;UBERON:0008814,1.98e-08,24;UBERON:0009145,1.98e-08,24;UBERON:0000072,2.09e-07,27;UBERON:0002371,6.73e-07,16;UBERON:0004177,7.67e-07,29;UBERON:0005057,7.67e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,18.9811285459117,6.47628121897667,8.19225842126977,1.54096171402954,1.03703806693937,8.04643430676667,10.3156074854417,1.66554880907831,1.41732687172878,0,8.51747846467242,6.7186072466812,6.36584477697045,0,0.0992909512008853,0.522399578277871,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0,0.588231488031014,2.73218193983378,0.485510353031154,0,0,0,0,0,0,0,0,0,8.55691290894455,7.97898356212479,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.838705871541442,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0.188368457004691,0.27338845544205,0,1.35982743995084,0.69975726161829,1.24379976423981,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0,0.79472541912506,0.360586348559907,0.147689527174577,0.504832249740738,0.533447646584999,1.10908803650525,0.682205165178267,0.481059208201647,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,18.9811285459117,6.47628121897667,8.19225842126977,1.54096171402954,1.03703806693937,8.04643430676667,10.3156074854417,1.66554880907831,1.41732687172878,0,8.51747846467242,6.7186072466812,6.36584477697045,0,0.0992909512008853,0.522399578277871,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0,0.588231488031014,2.73218193983378,0.485510353031154,0,0,0,0,0,0,0,0,0,8.55691290894455,7.97898356212479,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.838705871541442,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0.188368457004691,0.27338845544205,0,1.35982743995084,0.69975726161829,1.24379976423981,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0,0.79472541912506,0.360586348559907,0.147689527174577,0.504832249740738,0.533447646584999,1.10908803650525,0.682205165178267,0.481059208201647,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr2:58009610..58009638,+ | |short_description=p@chr2:58009610..58009638,+ | ||
}} | }} |
Latest revision as of 06:41, 5 August 2015
Short description: | p@chr2:58009610..58009638, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:58009610..58009638, + |
Coexpression cluster: | MCL_coexpression_mm9:21 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.57e-20 | 46 |
hemolymphoid system | 1.29e-13 | 48 |
immune system | 1.29e-13 | 48 |
hematopoietic system | 1.83e-12 | 45 |
blood island | 1.83e-12 | 45 |
thymus | 7.89e-09 | 23 |
neck | 7.89e-09 | 23 |
respiratory system epithelium | 7.89e-09 | 23 |
hemolymphoid system gland | 7.89e-09 | 23 |
pharyngeal epithelium | 7.89e-09 | 23 |
thymic region | 7.89e-09 | 23 |
pharyngeal gland | 7.89e-09 | 23 |
entire pharyngeal arch endoderm | 7.89e-09 | 23 |
thymus primordium | 7.89e-09 | 23 |
early pharyngeal endoderm | 7.89e-09 | 23 |
pharynx | 1.98e-08 | 24 |
gland of gut | 1.98e-08 | 24 |
upper respiratory tract | 1.98e-08 | 24 |
chordate pharynx | 1.98e-08 | 24 |
pharyngeal arch system | 1.98e-08 | 24 |
pharyngeal region of foregut | 1.98e-08 | 24 |
segment of respiratory tract | 2.09e-07 | 27 |
bone marrow | 6.73e-07 | 16 |
hemopoietic organ | 7.67e-07 | 29 |
immune organ | 7.67e-07 | 29 |