FFCP PHASE1:Mm9::chrX:20272630..20272655,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18555 | |EntrezGene=18555 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=138 | |MCL_coexpression_id=138 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-331bp_to_ENSMUST00000122944_5end | |association_with_transcript=-331bp_to_ENSMUST00000122944_5end | ||
|cluster_id=chrX:20272630..20272655,+ | |||
|description=CAGE_peak_5_at_Cdk16_5end | |description=CAGE_peak_5_at_Cdk16_5end | ||
|id=chrX:20272630..20272655,+ | |id=chrX:20272630..20272655,+ | ||
|ontology_enrichment_celltype=CL:0000117!7.21e-09!23;CL:0000337!7.21e-09!23;CL:0000055!2.03e-07!50;CL:0002319!2.92e-07!43;CL:0000221!6.87e-07!44;CL:0000133!6.87e-07!44 | |ontology_enrichment_celltype=CL:0000117!7.21e-09!23;CL:0000337!7.21e-09!23;CL:0000055!2.03e-07!50;CL:0002319!2.92e-07!43;CL:0000221!6.87e-07!44;CL:0000133!6.87e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.06e-15,23;CL:0000337,1.06e-15,23;CL:0002319,1.19e-13,43;CL:0000221,3.33e-13,44;CL:0000133,3.33e-13,44;CL:0000393,9.39e-10,39;CL:0000211,9.39e-10,39;CL:0000540,1.27e-09,33;CL:0000047,1.27e-09,33;CL:0000031,1.27e-09,33;CL:0000404,1.27e-09,33;CL:0002321,2.08e-09,70;CL:0002194,4.10e-07,4;CL:0000766,4.10e-07,4;CL:0000234,4.10e-07,4;CL:0000576,4.10e-07,4;CL:0000235,4.10e-07,4;CL:0000864,4.10e-07,4;CL:0002009,4.10e-07,4;CL:0000040,4.10e-07,4;CL:0000559,4.10e-07,4;CL:0002453,8.69e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.40e-14!73;UBERON:0005743!1.40e-14!73;UBERON:0002020!4.16e-14!34;UBERON:0000073!6.52e-14!75;UBERON:0001016!6.52e-14!75;UBERON:0001049!1.41e-13!52;UBERON:0005068!1.41e-13!52;UBERON:0006241!1.41e-13!52;UBERON:0007135!1.41e-13!52;UBERON:0000955!3.87e-11!50;UBERON:0006238!3.87e-11!50;UBERON:0002791!4.54e-11!29;UBERON:0003528!4.54e-11!29;UBERON:0001893!4.54e-11!29;UBERON:0002616!1.25e-10!49;UBERON:0000956!3.43e-10!21;UBERON:0001869!3.43e-10!21;UBERON:0000203!3.43e-10!21;UBERON:0002780!2.51e-09!39;UBERON:0001890!2.51e-09!39;UBERON:0006240!2.51e-09!39;UBERON:0003080!3.74e-09!40;UBERON:0002346!4.41e-09!71;UBERON:0003075!4.41e-09!71;UBERON:0007284!4.41e-09!71;UBERON:0002619!6.14e-09!17;UBERON:0004121!8.30e-09!102;UBERON:0000924!8.30e-09!102;UBERON:0006601!8.30e-09!102;UBERON:0002021!7.78e-08!10;UBERON:0000411!7.78e-08!10;UBERON:0001950!7.78e-08!10;UBERON:0000033!3.50e-07!63 | |ontology_enrichment_uberon=UBERON:0001017!1.40e-14!73;UBERON:0005743!1.40e-14!73;UBERON:0002020!4.16e-14!34;UBERON:0000073!6.52e-14!75;UBERON:0001016!6.52e-14!75;UBERON:0001049!1.41e-13!52;UBERON:0005068!1.41e-13!52;UBERON:0006241!1.41e-13!52;UBERON:0007135!1.41e-13!52;UBERON:0000955!3.87e-11!50;UBERON:0006238!3.87e-11!50;UBERON:0002791!4.54e-11!29;UBERON:0003528!4.54e-11!29;UBERON:0001893!4.54e-11!29;UBERON:0002616!1.25e-10!49;UBERON:0000956!3.43e-10!21;UBERON:0001869!3.43e-10!21;UBERON:0000203!3.43e-10!21;UBERON:0002780!2.51e-09!39;UBERON:0001890!2.51e-09!39;UBERON:0006240!2.51e-09!39;UBERON:0003080!3.74e-09!40;UBERON:0002346!4.41e-09!71;UBERON:0003075!4.41e-09!71;UBERON:0007284!4.41e-09!71;UBERON:0002619!6.14e-09!17;UBERON:0004121!8.30e-09!102;UBERON:0000924!8.30e-09!102;UBERON:0006601!8.30e-09!102;UBERON:0002021!7.78e-08!10;UBERON:0000411!7.78e-08!10;UBERON:0001950!7.78e-08!10;UBERON:0000033!3.50e-07!63 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.46e-23,73;UBERON:0001016,1.16e-22,75;UBERON:0002020,2.89e-22,34;UBERON:0000073,6.38e-20,54;UBERON:0001049,4.04e-19,52;UBERON:0005068,4.04e-19,52;UBERON:0006241,4.04e-19,52;UBERON:0007135,4.04e-19,52;UBERON:0002021,2.08e-17,10;UBERON:0000411,2.08e-17,10;UBERON:0001950,2.08e-17,10;UBERON:0004121,9.41e-16,95;UBERON:0000924,9.41e-16,95;UBERON:0006601,9.41e-16,95;UBERON:0003528,1.62e-15,29;UBERON:0002791,1.62e-15,29;UBERON:0001893,1.62e-15,29;UBERON:0002619,2.58e-15,17;UBERON:0002346,4.73e-14,64;UBERON:0003075,4.73e-14,64;UBERON:0007284,4.73e-14,64;UBERON:0000956,7.22e-14,21;UBERON:0001869,7.22e-14,21;UBERON:0000203,7.22e-14,21;UBERON:0000955,1.81e-13,47;UBERON:0006238,1.81e-13,47;UBERON:0002616,1.83e-12,46;UBERON:0002780,1.97e-11,39;UBERON:0001890,1.97e-11,39;UBERON:0006240,1.97e-11,39;UBERON:0010371,2.26e-11,73;UBERON:0003080,5.12e-11,40;UBERON:0002240,2.04e-10,6;UBERON:0005174,2.04e-10,6;UBERON:0001137,2.04e-10,6;UBERON:0003076,6.02e-10,12;UBERON:0003057,6.02e-10,12;UBERON:0010314,7.98e-10,92;UBERON:0001948,3.90e-09,5;UBERON:0002315,3.90e-09,5;UBERON:0000025,2.33e-08,114;UBERON:0003056,4.55e-08,49;UBERON:0004111,2.92e-07,122 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.30246421130683,1.00179145989269,0.16787927191189,0.700837921786577,0.129123323441576,0,0.234064526321993,0.171217968225505,0,0.684802919724823,0.34968160967599,0.333109761815663,0.809901069559304,2.09868563438444,0.157731082679119,0.137114433605739,0,0.340173160604279,0.198581902401771,0,1.11994695955385,0.45881856213434,0.57423196411502,0.430761996159075,0.215471232685889,0.380046838912748,0.504060259519861,0.221730510655305,0.635030673459631,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.709638518536602,0.550640256485045,0,2.39827672018491,0.878744730937887,1.36100929351998,1.1198913730029,1.43752564364972,0,0.725362142011344,0,1.80081605225163,1.14613375975503,0,0.404632921719196,2.11596391708813,2.53532561402472,0.677689064138264,0,0.899899717281399,2.96659908770092,1.4209602298922,4.49400165777607,1.92109152660777,0.725827286159344,3.51015439662396,0.841299845405528,3.99911378165325,3.09215957332259,0.489963196859816,1.24599112323707,2.75765635983006,0,2.80912143787413,2.61131106535614,0.791317726381163,1.9212405156506,1.56274011167028,4.18774498502071,0,1.06958773443767,4.41942878210502,2.56269025438385,1.4911955666024,0.151452386666368,0.226714680320357,0.579728977403356,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0.702222100658759,0.511290967734173,0.779358013808606,1.06001872353102,0.14084341977668,0,0,0,0.432982082022428,0.506719730950197,1.51657333504435,0.45673551887624,0.258937883647172,0.890652834388949,0.520455980298408,0,0.230615497256059,0,0.352766121407114,0.251333182659351,0.247194967734374,1.15679485535929,0,0.161766849947409,0,0,0,1.17112318804619,1.25668024088073,0.510914110417183,0.479260498023681,0,0.127070227073065,0.299581278809645,0.915001205637253,0.125654352112864,0.521472960576829,1.02286182932132,0.83115217823824,0.324482526135515,0.101839363850316,0.124406970610093,1.0108910337347,0,0.260240885925407,0.229902104433473,0.180062129805349,0.452114453507145,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0.431135985865684,0.378212160335639,0.351902248327898,1.31517439456545,0.834141747676794,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,1.03562886267751,0.938104239924385,0.180062061461015,0.473489471170421,0.393528463494808,0.154267112887378,0.232533944750408,0,0.116765342367169,0.493679549740441,0,0.324275238183423,0.292399974850665,0.658650345873152,0.268412837520744,0.630869845692382,0.205809224758569,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0.667134131534611,0.570676878337677,0,0.658795818896044,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0.379335801906163,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0.147610147979602,0.31399745568275,0.246794327843601,0,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0.372140947668503,0,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0.488894929326078,0.169745085775188,0.234690248288502,0.335012514883631,0,0.195133647857799,0,0.221464689648775,0.318909537314974,0.491589944147214,0,0.578596234326046,1.50791283939272,1.63171705145613,0.491764273019036,0.551873492609465,0.642202359951168,0.820481806145422,0.163934945376675,0.504941854408746,0.315508219416257,0,0.646270193198397,0.477937595905104,0.445597348164788,0,0,0.584511715822624,0,2.24924921495265,0.283880170416537,0.178065603667255,0.325773918707152,0.824850614862677,0,0.971122544619926,0.302323556964751,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0.356497378384721,0,1.05418608574999,0,0.340439605753788,0.18006109403131,0.776152102696527,0.214337035031592,1.06404140185364,0.356737635204141,0.164549020602121,0,0.23467170806371,0.42366414172764,0,0,0.322928853391811,0.301564624640779,0.119372344003136,0.164140899745061,0,1.66882771809459,0,0,0.555583582109135,0.565105371014073,0.136694227721025,0.457556346413045,0,0.279902904647316,0.414599921413271,0,0.474503990371703,0.609958401380546,0.216010681643603,0,0.218362563746178,0.134864346384821,0,0,0.259229946583586,0,1.69107881605257,0.448549638131936,0.330916980914195,0,0.387479470433193,0,0.469428954583016,0.39061315453185,0.209718688851422,0.483168241652012,0.576060012515731,0,0.405450430580328,0.308132871494482,0.51968329191118,0.179026695667481,0.198681354781265,0.120195449519969,0,0.201932899896295,0.0762068066549998,0,0,0.0962118416403295,0,0.226730383615211,0.221985953374065,0.538283139656854,0,0.19318959403219,0.563047426353546,0.183151624267265,0,0.501572104035363,6.7770221114048,10.1271552031579,6.87474616127276,2.749650917499,3.42541259885321,3.7769694869485,1.35004500046361,4.05289082901798,3.17199686288943,2.5888015587591,0.415149390336707,0.399024873401031,0.341467211508268,0,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,1.28367683836726,1.26348605881899,0.760437899670719,0.943131706930381,0.468207537349412,0.192075457214608,0.34461281373368,0,0.115884325944855,0.77163688185482,0,0.735994600671987,0.342869252385415,0.887379030796687,0,0.290692833264657,0.564656282491984,0.592302255241736,0.182927972872773,0.263069711437843,0.679020569229309,0.561142271657738,0.711810108745045,0.394017929502254,0,0.464810523557898,0.385813221962283,0.499621155875892,0,0.214871054048298,0.765153328275374,0.220591419119515,0.927471342481686 | |phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.30246421130683,1.00179145989269,0.16787927191189,0.700837921786577,0.129123323441576,0,0.234064526321993,0.171217968225505,0,0.684802919724823,0.34968160967599,0.333109761815663,0.809901069559304,2.09868563438444,0.157731082679119,0.137114433605739,0,0.340173160604279,0.198581902401771,0,1.11994695955385,0.45881856213434,0.57423196411502,0.430761996159075,0.215471232685889,0.380046838912748,0.504060259519861,0.221730510655305,0.635030673459631,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.709638518536602,0.550640256485045,0,2.39827672018491,0.878744730937887,1.36100929351998,1.1198913730029,1.43752564364972,0,0.725362142011344,0,1.80081605225163,1.14613375975503,0,0.404632921719196,2.11596391708813,2.53532561402472,0.677689064138264,0,0.899899717281399,2.96659908770092,1.4209602298922,4.49400165777607,1.92109152660777,0.725827286159344,3.51015439662396,0.841299845405528,3.99911378165325,3.09215957332259,0.489963196859816,1.24599112323707,2.75765635983006,0,2.80912143787413,2.61131106535614,0.791317726381163,1.9212405156506,1.56274011167028,4.18774498502071,0,1.06958773443767,4.41942878210502,2.56269025438385,1.4911955666024,0.151452386666368,0.226714680320357,0.579728977403356,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0.702222100658759,0.511290967734173,0.779358013808606,1.06001872353102,0.14084341977668,0,0,0,0.432982082022428,0.506719730950197,1.51657333504435,0.45673551887624,0.258937883647172,0.890652834388949,0.520455980298408,0,0.230615497256059,0,0.352766121407114,0.251333182659351,0.247194967734374,1.15679485535929,0,0.161766849947409,0,0,0,1.17112318804619,1.25668024088073,0.510914110417183,0.479260498023681,0,0.127070227073065,0.299581278809645,0.915001205637253,0.125654352112864,0.521472960576829,1.02286182932132,0.83115217823824,0.324482526135515,0.101839363850316,0.124406970610093,1.0108910337347,0,0.260240885925407,0.229902104433473,0.180062129805349,0.452114453507145,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0.431135985865684,0.378212160335639,0.351902248327898,1.31517439456545,0.834141747676794,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,1.03562886267751,0.938104239924385,0.180062061461015,0.473489471170421,0.393528463494808,0.154267112887378,0.232533944750408,0,0.116765342367169,0.493679549740441,0,0.324275238183423,0.292399974850665,0.658650345873152,0.268412837520744,0.630869845692382,0.205809224758569,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0.667134131534611,0.570676878337677,0,0.658795818896044,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0.379335801906163,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0.147610147979602,0.31399745568275,0.246794327843601,0,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0.372140947668503,0,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0.488894929326078,0.169745085775188,0.234690248288502,0.335012514883631,0,0.195133647857799,0,0.221464689648775,0.318909537314974,0.491589944147214,0,0.578596234326046,1.50791283939272,1.63171705145613,0.491764273019036,0.551873492609465,0.642202359951168,0.820481806145422,0.163934945376675,0.504941854408746,0.315508219416257,0,0.646270193198397,0.477937595905104,0.445597348164788,0,0,0.584511715822624,0,2.24924921495265,0.283880170416537,0.178065603667255,0.325773918707152,0.824850614862677,0,0.971122544619926,0.302323556964751,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0.356497378384721,0,1.05418608574999,0,0.340439605753788,0.18006109403131,0.776152102696527,0.214337035031592,1.06404140185364,0.356737635204141,0.164549020602121,0,0.23467170806371,0.42366414172764,0,0,0.322928853391811,0.301564624640779,0.119372344003136,0.164140899745061,0,1.66882771809459,0,0,0.555583582109135,0.565105371014073,0.136694227721025,0.457556346413045,0,0.279902904647316,0.414599921413271,0,0.474503990371703,0.609958401380546,0.216010681643603,0,0.218362563746178,0.134864346384821,0,0,0.259229946583586,0,1.69107881605257,0.448549638131936,0.330916980914195,0,0.387479470433193,0,0.469428954583016,0.39061315453185,0.209718688851422,0.483168241652012,0.576060012515731,0,0.405450430580328,0.308132871494482,0.51968329191118,0.179026695667481,0.198681354781265,0.120195449519969,0,0.201932899896295,0.0762068066549998,0,0,0.0962118416403295,0,0.226730383615211,0.221985953374065,0.538283139656854,0,0.19318959403219,0.563047426353546,0.183151624267265,0,0.501572104035363,6.7770221114048,10.1271552031579,6.87474616127276,2.749650917499,3.42541259885321,3.7769694869485,1.35004500046361,4.05289082901798,3.17199686288943,2.5888015587591,0.415149390336707,0.399024873401031,0.341467211508268,0,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,1.28367683836726,1.26348605881899,0.760437899670719,0.943131706930381,0.468207537349412,0.192075457214608,0.34461281373368,0,0.115884325944855,0.77163688185482,0,0.735994600671987,0.342869252385415,0.887379030796687,0,0.290692833264657,0.564656282491984,0.592302255241736,0.182927972872773,0.263069711437843,0.679020569229309,0.561142271657738,0.711810108745045,0.394017929502254,0,0.464810523557898,0.385813221962283,0.499621155875892,0,0.214871054048298,0.765153328275374,0.220591419119515,0.927471342481686 | ||
|short_description=p5@Cdk16 | |short_description=p5@Cdk16 | ||
}} | }} |
Latest revision as of 19:28, 1 October 2015
Short description: | p5@Cdk16 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cdk16_5end |
Coexpression cluster: | MCL_coexpression_mm9:138 |
Association with transcript: | -331bp_to_ENSMUST00000122944_5end |
EntrezGene: | Cdk16 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.06e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.06e-15 | 23 |
neural cell | 1.19e-13 | 43 |
ectodermal cell | 3.33e-13 | 44 |
neurectodermal cell | 3.33e-13 | 44 |
electrically responsive cell | 9.39e-10 | 39 |
electrically active cell | 9.39e-10 | 39 |
neuron | 1.27e-09 | 33 |
neuronal stem cell | 1.27e-09 | 33 |
neuroblast | 1.27e-09 | 33 |
electrically signaling cell | 1.27e-09 | 33 |
embryonic cell | 2.08e-09 | 70 |
monopoietic cell | 4.10e-07 | 4 |
myeloid leukocyte | 4.10e-07 | 4 |
phagocyte | 4.10e-07 | 4 |
monocyte | 4.10e-07 | 4 |
macrophage | 4.10e-07 | 4 |
tissue-resident macrophage | 4.10e-07 | 4 |
macrophage dendritic cell progenitor | 4.10e-07 | 4 |
monoblast | 4.10e-07 | 4 |
promonocyte | 4.10e-07 | 4 |
oligodendrocyte precursor cell | 8.69e-07 | 8 |