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FFCP PHASE1:Mm9::chr4:34032489..34032494,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=580
|MCL_coexpression_id=580
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr4:34032489..34032494,+
|description=CAGE_peak_at_chr4:34032489..34032494,+
|description=CAGE_peak_at_chr4:34032489..34032494,+
|id=chr4:34032489..34032494,+
|id=chr4:34032489..34032494,+
|ontology_enrichment_celltype=CL:0000117!3.36e-13!23;CL:0000337!3.36e-13!23;CL:0000540!7.09e-11!33;CL:0000047!7.09e-11!33;CL:0000031!7.09e-11!33;CL:0000404!7.09e-11!33;CL:0000393!8.31e-08!39;CL:0000211!8.31e-08!39;CL:0000221!1.01e-07!44;CL:0000133!1.01e-07!44;CL:0002319!2.19e-07!43
|ontology_enrichment_celltype=CL:0000117!3.36e-13!23;CL:0000337!3.36e-13!23;CL:0000540!7.09e-11!33;CL:0000047!7.09e-11!33;CL:0000031!7.09e-11!33;CL:0000404!7.09e-11!33;CL:0000393!8.31e-08!39;CL:0000211!8.31e-08!39;CL:0000221!1.01e-07!44;CL:0000133!1.01e-07!44;CL:0002319!2.19e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,3.25e-23,23;CL:0000337,3.25e-23,23;CL:0000540,5.94e-16,33;CL:0000047,5.94e-16,33;CL:0000031,5.94e-16,33;CL:0000404,5.94e-16,33;CL:0000393,1.56e-12,39;CL:0000211,1.56e-12,39;CL:0002319,8.39e-11,43;CL:0000221,2.02e-10,44;CL:0000133,2.02e-10,44;CL:0002609,1.01e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.94e-26!71;UBERON:0003075!1.94e-26!71;UBERON:0007284!1.94e-26!71;UBERON:0000033!9.18e-23!63;UBERON:0004121!7.63e-22!102;UBERON:0000924!7.63e-22!102;UBERON:0006601!7.63e-22!102;UBERON:0001049!1.07e-21!52;UBERON:0005068!1.07e-21!52;UBERON:0006241!1.07e-21!52;UBERON:0007135!1.07e-21!52;UBERON:0002020!1.13e-20!34;UBERON:0001017!1.45e-20!73;UBERON:0005743!1.45e-20!73;UBERON:0000073!2.26e-20!75;UBERON:0001016!2.26e-20!75;UBERON:0000955!4.05e-20!50;UBERON:0006238!4.05e-20!50;UBERON:0002616!6.92e-20!49;UBERON:0003056!9.44e-20!49;UBERON:0002791!1.38e-17!29;UBERON:0003528!1.38e-17!29;UBERON:0001893!1.38e-17!29;UBERON:0003080!8.79e-17!40;UBERON:0002780!3.81e-16!39;UBERON:0001890!3.81e-16!39;UBERON:0006240!3.81e-16!39;UBERON:0000956!1.25e-12!21;UBERON:0001869!1.25e-12!21;UBERON:0000203!1.25e-12!21;UBERON:0007811!5.04e-11!86;UBERON:0002619!1.17e-09!17;UBERON:0000153!3.50e-09!94;UBERON:0002021!7.68e-08!10;UBERON:0000411!7.68e-08!10;UBERON:0001950!7.68e-08!10
|ontology_enrichment_uberon=UBERON:0002346!1.94e-26!71;UBERON:0003075!1.94e-26!71;UBERON:0007284!1.94e-26!71;UBERON:0000033!9.18e-23!63;UBERON:0004121!7.63e-22!102;UBERON:0000924!7.63e-22!102;UBERON:0006601!7.63e-22!102;UBERON:0001049!1.07e-21!52;UBERON:0005068!1.07e-21!52;UBERON:0006241!1.07e-21!52;UBERON:0007135!1.07e-21!52;UBERON:0002020!1.13e-20!34;UBERON:0001017!1.45e-20!73;UBERON:0005743!1.45e-20!73;UBERON:0000073!2.26e-20!75;UBERON:0001016!2.26e-20!75;UBERON:0000955!4.05e-20!50;UBERON:0006238!4.05e-20!50;UBERON:0002616!6.92e-20!49;UBERON:0003056!9.44e-20!49;UBERON:0002791!1.38e-17!29;UBERON:0003528!1.38e-17!29;UBERON:0001893!1.38e-17!29;UBERON:0003080!8.79e-17!40;UBERON:0002780!3.81e-16!39;UBERON:0001890!3.81e-16!39;UBERON:0006240!3.81e-16!39;UBERON:0000956!1.25e-12!21;UBERON:0001869!1.25e-12!21;UBERON:0000203!1.25e-12!21;UBERON:0007811!5.04e-11!86;UBERON:0002619!1.17e-09!17;UBERON:0000153!3.50e-09!94;UBERON:0002021!7.68e-08!10;UBERON:0000411!7.68e-08!10;UBERON:0001950!7.68e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.00e-37,54;UBERON:0001049,7.45e-35,52;UBERON:0005068,7.45e-35,52;UBERON:0006241,7.45e-35,52;UBERON:0007135,7.45e-35,52;UBERON:0002020,1.41e-34,34;UBERON:0001017,4.39e-31,73;UBERON:0002346,6.57e-31,64;UBERON:0003075,6.57e-31,64;UBERON:0007284,6.57e-31,64;UBERON:0003528,1.56e-30,29;UBERON:0002791,1.56e-30,29;UBERON:0001893,1.56e-30,29;UBERON:0001016,6.49e-30,75;UBERON:0002616,1.79e-29,46;UBERON:0000955,1.25e-28,47;UBERON:0006238,1.25e-28,47;UBERON:0010371,3.36e-27,73;UBERON:0003080,9.28e-26,40;UBERON:0004121,1.39e-24,95;UBERON:0000924,1.39e-24,95;UBERON:0006601,1.39e-24,95;UBERON:0002780,1.43e-24,39;UBERON:0001890,1.43e-24,39;UBERON:0006240,1.43e-24,39;UBERON:0003056,5.77e-24,49;UBERON:0010314,2.32e-21,92;UBERON:0000956,7.22e-21,21;UBERON:0001869,7.22e-21,21;UBERON:0000203,7.22e-21,21;UBERON:0002619,3.50e-15,17;UBERON:0002021,5.89e-12,10;UBERON:0000411,5.89e-12,10;UBERON:0001950,5.89e-12,10;UBERON:0002420,1.16e-10,8;UBERON:0007245,1.16e-10,8;UBERON:0010009,1.16e-10,8;UBERON:0010011,1.16e-10,8;UBERON:0000454,1.16e-10,8;UBERON:0000025,6.56e-10,114;UBERON:0004111,2.50e-09,122;UBERON:0003076,3.14e-09,12;UBERON:0003057,3.14e-09,12;UBERON:0000369,2.31e-07,5;UBERON:0002435,2.31e-07,5;UBERON:0000204,2.31e-07,5;UBERON:0010082,2.31e-07,5
|phase1_expression=2.5623815536767,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.439372365468944,0,0.139986421625363,0,0,0,0,0,0,0,3.03474691289397,2.64495489636016,0,0,0,0,0,0,0,0,7.77672092313582,7.42532660824299,5.67877395648731,0.856952953211411,2.42955395046775,1.95985278743926,1.0543001812006,1.83843757322004,3.30347642998166,2.17068474744819,2.30409799884365,1.58263545276233,1.18933936683133,3.64639359389732,1.11673199600552,3.93933827022176,3.51435969886663,2.94628585473668,3.41692033917847,5.96478226640962,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.985903938436763,0,0,0,0,0,0,0.79928715803342,0,0.148442139064825,1.38788261412909,0.913396434936424,0.461230994512117,1.3565037649736,0.587943535678524,0.628332956648377,0,0,0,0.161766849947409,0,0,0,9.9545470983926,19.4785437336513,0.255457055208591,0,0,0,2.99581278809645,4.57500602818627,4.27224797183739,3.82413504423008,6.90431734791892,2.90903262383384,3.89379031362618,0.611036183101898,0.373220911830279,0.252722758433675,0.210441855886474,0.650602214813519,0.919608417733892,0.540186389416048,1.20563854268572,1.42876648217788,0.768682321709099,0.937017245597288,1.55222022443409,0,0,0,0.219195732427575,0.556094498451196,0,0,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,6.09840850835969,9.77593817603202,0,0.264450566663544,1.06644125267617,0.928946687441754,0.128867461322093,0.403367049246685,0.667134131534611,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0.795825888164603,1.9496408711912,0,0.216138049874694,0.995706366271836,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788175720530955,0.44292937929755,0.956728611944923,0,0.518054945597687,0.144649058581512,0,0,0,0,2.56880943980467,3.8679856575427,0,0,0,0.780877488593277,0.215423397732799,0,0.445597348164788,0.283076530788832,0,0,0.790575555893047,0.642642632843614,0,0.712262414669021,0.651547837414304,0,0,0.242780636154981,0,0.377210159511796,0,0,0,0,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0.540183282093931,0.258717367565509,0.643011105094777,0,0,0.329098041204242,0.304464949114599,0,0,0,0,0.161464426695906,0,0.358117032009409,0,0.291480836629851,1.8542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0.474503990371703,0,0.216010681643603,0,0,0.404593039154462,0.330613822901344,0,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0.388902376688095,0.645799117388655,0.337912250981556,0,0.2604087696879,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,3.95326289831947,4.14292712856459,4.01026859407578,4.1244763762485,4.11049511862385,0.755393897389701,6.07520250208625,2.2516060161211,3.17199686288943,4.14208249401456,0.103787347584177,0.399024873401031,0.682934423016537,0.486213434136588,1.04806581313991,0.551530525350042,1.11123363900808,1.44224540067226,1.28367683836726,0.505394423527595,0.760437899670719,0.754505365544305,1.21733959710847,0.704276676453562,0.746661096422973,1.90517476513229,0.463537303779422,1.15745532278223,0.412085900803307,0.883193520806384,0.685738504770831,1.4198064492747,2.14592570952589,0.726732083161643,0.846984423737976,1.60767754994185,0.548783918618318,0.789209134313529,1.35804113845862,0,0.711810108745045,0.985044823755635,0,0.619747364743864,0.964533054905707,1.24905288968973,0.467863216890817,0.644613162144895,0.191288332068843,0,0
|phase1_expression=2.5623815536767,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.439372365468944,0,0.139986421625363,0,0,0,0,0,0,0,3.03474691289397,2.64495489636016,0,0,0,0,0,0,0,0,7.77672092313582,7.42532660824299,5.67877395648731,0.856952953211411,2.42955395046775,1.95985278743926,1.0543001812006,1.83843757322004,3.30347642998166,2.17068474744819,2.30409799884365,1.58263545276233,1.18933936683133,3.64639359389732,1.11673199600552,3.93933827022176,3.51435969886663,2.94628585473668,3.41692033917847,5.96478226640962,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.985903938436763,0,0,0,0,0,0,0.79928715803342,0,0.148442139064825,1.38788261412909,0.913396434936424,0.461230994512117,1.3565037649736,0.587943535678524,0.628332956648377,0,0,0,0.161766849947409,0,0,0,9.9545470983926,19.4785437336513,0.255457055208591,0,0,0,2.99581278809645,4.57500602818627,4.27224797183739,3.82413504423008,6.90431734791892,2.90903262383384,3.89379031362618,0.611036183101898,0.373220911830279,0.252722758433675,0.210441855886474,0.650602214813519,0.919608417733892,0.540186389416048,1.20563854268572,1.42876648217788,0.768682321709099,0.937017245597288,1.55222022443409,0,0,0,0.219195732427575,0.556094498451196,0,0,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,6.09840850835969,9.77593817603202,0,0.264450566663544,1.06644125267617,0.928946687441754,0.128867461322093,0.403367049246685,0.667134131534611,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0.795825888164603,1.9496408711912,0,0.216138049874694,0.995706366271836,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788175720530955,0.44292937929755,0.956728611944923,0,0.518054945597687,0.144649058581512,0,0,0,0,2.56880943980467,3.8679856575427,0,0,0,0.780877488593277,0.215423397732799,0,0.445597348164788,0.283076530788832,0,0,0.790575555893047,0.642642632843614,0,0.712262414669021,0.651547837414304,0,0,0.242780636154981,0,0.377210159511796,0,0,0,0,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0.540183282093931,0.258717367565509,0.643011105094777,0,0,0.329098041204242,0.304464949114599,0,0,0,0,0.161464426695906,0,0.358117032009409,0,0.291480836629851,1.8542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0.474503990371703,0,0.216010681643603,0,0,0.404593039154462,0.330613822901344,0,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0.388902376688095,0.645799117388655,0.337912250981556,0,0.2604087696879,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,3.95326289831947,4.14292712856459,4.01026859407578,4.1244763762485,4.11049511862385,0.755393897389701,6.07520250208625,2.2516060161211,3.17199686288943,4.14208249401456,0.103787347584177,0.399024873401031,0.682934423016537,0.486213434136588,1.04806581313991,0.551530525350042,1.11123363900808,1.44224540067226,1.28367683836726,0.505394423527595,0.760437899670719,0.754505365544305,1.21733959710847,0.704276676453562,0.746661096422973,1.90517476513229,0.463537303779422,1.15745532278223,0.412085900803307,0.883193520806384,0.685738504770831,1.4198064492747,2.14592570952589,0.726732083161643,0.846984423737976,1.60767754994185,0.548783918618318,0.789209134313529,1.35804113845862,0,0.711810108745045,0.985044823755635,0,0.619747364743864,0.964533054905707,1.24905288968973,0.467863216890817,0.644613162144895,0.191288332068843,0,0
|short_description=p@chr4:34032489..34032494,+
|short_description=p@chr4:34032489..34032494,+
}}
}}

Latest revision as of 09:48, 5 August 2015

Short description:p@chr4:34032489..34032494, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr4:34032489..34032494, +
Coexpression cluster:MCL_coexpression_mm9:580
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr4:34032489..34032494+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.78
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.95
cerebellum, neonate N30.CNhs11135.1395-42I219.48
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F14.27
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F26.90
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E86.10
hippocampus, neonate N00.CNhs11228.627-43G19.78
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A33.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.00e-3754
neural tube7.45e-3552
neural rod7.45e-3552
future spinal cord7.45e-3552
neural keel7.45e-3552
gray matter1.41e-3434
central nervous system4.39e-3173
neurectoderm6.57e-3164
neural plate6.57e-3164
presumptive neural plate6.57e-3164
brain grey matter1.56e-3029
regional part of telencephalon1.56e-3029
telencephalon1.56e-3029
nervous system6.49e-3075
regional part of brain1.79e-2946
brain1.25e-2847
future brain1.25e-2847
ecto-epithelium3.36e-2773
anterior neural tube9.28e-2640
ectoderm-derived structure1.39e-2495
ectoderm1.39e-2495
presumptive ectoderm1.39e-2495
regional part of forebrain1.43e-2439
forebrain1.43e-2439
future forebrain1.43e-2439
pre-chordal neural plate5.77e-2449
structure with developmental contribution from neural crest2.32e-2192
cerebral cortex7.22e-2121
cerebral hemisphere7.22e-2121
pallium7.22e-2121
regional part of cerebral cortex3.50e-1517
occipital lobe5.89e-1210
visual cortex5.89e-1210
neocortex5.89e-1210
basal ganglion1.16e-108
nuclear complex of neuraxis1.16e-108
aggregate regional part of brain1.16e-108
collection of basal ganglia1.16e-108
cerebral subcortex1.16e-108
tube6.56e-10114
anatomical conduit2.50e-09122
posterior neural tube3.14e-0912
chordal neural plate3.14e-0912
corpus striatum2.31e-075
striatum2.31e-075
ventral part of telencephalon2.31e-075
future corpus striatum2.31e-075
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