FFCP PHASE1:Hg19::chr2:693380..693398,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:693380..693398,+
|short_description=p@chr2:693380..693398,+
|description=CAGE_peak_at_chr2:693380..693398,+
|association_with_transcript=NA
|EntrezGene=NA...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:693380..693398,+ | |||
|description=CAGE_peak_at_chr2:693380..693398,+ | |||
|id=chr2:693380..693398,+ | |||
|ontology_enrichment_celltype=CL:1000449!1.28e-33!16;CL:1000507!9.55e-32!12;CL:1000494!9.55e-32!12;CL:1000497!1.45e-29!18;CL:0002518!1.45e-29!18;CL:0002681!2.23e-23!13;CL:0002584!2.23e-23!13;CL:0000239!1.76e-12!3;CL:1000615!1.76e-12!3;CL:0002306!1.76e-12!3;CL:1000612!1.90e-09!7;CL:1000746!1.90e-09!7;CL:1000487!6.06e-08!2 | |||
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|ontology_enrichment_development_v019=UBERON:0007297;6.99e-07;2 | |||
|ontology_enrichment_disease=DOID:0060072!7.85e-16!4;DOID:0060084!2.78e-12!3;DOID:127!2.78e-12!3 | |||
|ontology_enrichment_disease_v019=DOID:0060085;3.44e-12;1!DOID:3165;3.44e-12;1!DOID:0060121;3.44e-12;1!DOID:2438;3.44e-12;1!DOID:4418;3.44e-12;1!DOID:0060072;8.39e-12;4!DOID:1325;2.77e-07;7!DOID:3904;2.77e-07;7!DOID:3910;5.11e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,4.31e-12,1;DOID:3165,4.31e-12,1;DOID:0060121,4.31e-12,1;DOID:2438,4.31e-12,1;DOID:4418,4.31e-12,1;DOID:0060072,8.87e-12,4;DOID:1325,3.05e-07,7;DOID:3904,3.05e-07,7;DOID:3910,5.11e-07,2 | |||
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| ||
|short_description=p@chr2:693380..693398,+ | |||
}} | }} |
Latest revision as of 11:43, 29 July 2015
Short description: | p@chr2:693380..693398, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:693380..693398, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 6.34e-89 | 10 |
nephron tubule epithelial cell | 6.34e-89 | 10 |
epithelial cell of nephron | 1.05e-87 | 15 |
kidney cell | 3.01e-77 | 17 |
kidney epithelial cell | 3.01e-77 | 17 |
kidney cortical cell | 4.80e-58 | 12 |
renal cortical epithelial cell | 4.80e-58 | 12 |
glomerular cell | 9.89e-26 | 7 |
kidney corpuscule cell | 9.89e-26 | 7 |
mesangial cell | 8.02e-24 | 2 |
kidney interstitial cell | 8.02e-24 | 2 |
juxtaglomerular complex cell | 8.02e-24 | 2 |
renal interstitial pericyte | 8.02e-24 | 2 |
extraglomerular mesangial cell | 8.02e-24 | 2 |
brush border epithelial cell | 8.44e-16 | 3 |
kidney cortex tubule cell | 8.44e-16 | 3 |
epithelial cell of proximal tubule | 8.44e-16 | 3 |
pericyte cell | 2.08e-12 | 4 |
glomerular endothelial cell | 1.11e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 4.31e-12 | 1 |
skin benign neoplasm | 4.31e-12 | 1 |
integumentary system benign neoplasm | 4.31e-12 | 1 |
dermis tumor | 4.31e-12 | 1 |
cutaneous fibrous histiocytoma | 4.31e-12 | 1 |