FFCP PHASE1:Hg19::chr4:148402237..148402276,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:148402237..148402276,+
|short_description=p1@EDNRA
|description=CAGE_peak_1_at_EDNRA_5end
|association_with_transcript=153bp_to_ENST00000324300,ENST0000051...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1909 | |EntrezGene=1909 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3179 | |HGNC=3179 | ||
|TSSclassifier=strong | |||
|UniProt=P25101,E7ER36 | |UniProt=P25101,E7ER36 | ||
|association_with_transcript=153bp_to_ENST00000324300,ENST00000511804_5end | |||
|cluster_id=chr4:148402237..148402276,+ | |||
|coexpression_cluster_id=C1936 | |||
|description=CAGE_peak_1_at_EDNRA_5end | |||
|id=chr4:148402237..148402276,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.29e-17!180;CL:0000057!1.33e-12!75;CL:0000680!3.48e-09!57;CL:0000056!3.48e-09!57;CL:0000355!3.48e-09!57;CL:0000187!1.52e-08!54;CL:0000183!1.98e-08!59;CL:0000192!7.05e-08!42;CL:0000514!7.05e-08!42;CL:0000359!2.61e-07!32;CL:0000393!2.82e-07!60;CL:0000211!2.82e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.38e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.68e-12,76;CL:0000680,3.55e-09,58;CL:0000056,3.55e-09,58;CL:0000355,3.55e-09,58;CL:0000187,1.66e-08,55;CL:0000192,6.31e-08,43;CL:0000514,6.31e-08,43;CL:0000359,3.52e-07,32;CL:0002620,7.58e-07,23;CL:0000393,9.83e-07,61;CL:0000211,9.83e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!5.68e-24!347;UBERON:0000475!5.70e-23!365;UBERON:0000468!9.67e-16!659;UBERON:0000914!7.87e-15!83;UBERON:0002329!7.87e-15!83;UBERON:0003077!7.87e-15!83;UBERON:0003059!7.87e-15!83;UBERON:0007282!7.87e-15!83;UBERON:0009618!7.87e-15!83;UBERON:0007285!7.87e-15!83;UBERON:0003102!1.17e-13!95;UBERON:0007023!5.66e-13!115;UBERON:0000477!1.97e-12!286;UBERON:0004290!1.99e-12!70;UBERON:0000119!2.44e-12!312;UBERON:0000467!5.02e-12!625;UBERON:0000480!5.96e-12!626;UBERON:0000922!9.42e-12!612;UBERON:0000153!1.04e-11!129;UBERON:0007811!1.04e-11!129;UBERON:0000483!1.63e-11!309;UBERON:0000033!1.72e-11!123;UBERON:0000924!2.27e-11!173;UBERON:0006601!2.27e-11!173;UBERON:0000486!2.31e-11!82;UBERON:0002050!3.65e-11!605;UBERON:0005423!3.65e-11!605;UBERON:0002385!5.10e-11!63;UBERON:0001015!5.10e-11!63;UBERON:0000383!5.10e-11!63;UBERON:0000923!8.77e-11!604;UBERON:0005291!8.77e-11!604;UBERON:0006598!8.77e-11!604;UBERON:0002532!8.77e-11!604;UBERON:0004121!8.87e-11!169;UBERON:0001134!1.48e-10!61;UBERON:0002036!1.48e-10!61;UBERON:0003082!1.48e-10!61;UBERON:0003104!3.89e-10!238;UBERON:0009142!3.89e-10!238;UBERON:0005256!8.06e-10!143;UBERON:0000062!1.85e-08!511;UBERON:0004111!8.06e-08!241;UBERON:0002100!1.07e-07!216;UBERON:0002346!2.51e-07!90;UBERON:0001444!3.30e-07!48;UBERON:0000479!7.85e-07!787;UBERON:0000064!8.57e-07!219;UBERON:0003075!8.89e-07!86;UBERON:0007284!8.89e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.73e-08;31!UBERON:0001015;2.73e-08;31!UBERON:0000383;2.73e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.99e-13,114;UBERON:0003102,2.35e-13,99;UBERON:0007524,7.28e-13,73;UBERON:0010314,9.81e-13,132;UBERON:0002329,1.46e-12,71;UBERON:0003059,1.46e-12,71;UBERON:0007282,1.46e-12,71;UBERON:0004290,1.46e-12,71;UBERON:0009618,1.46e-12,71;UBERON:0003077,2.12e-12,72;UBERON:0007285,2.12e-12,72;UBERON:0002050,1.71e-11,564;UBERON:0000119,1.90e-11,309;UBERON:0007503,2.01e-11,78;UBERON:0005423,2.74e-11,581;UBERON:0000486,3.97e-11,83;UBERON:0002385,4.41e-11,64;UBERON:0001015,4.41e-11,64;UBERON:0000383,4.41e-11,64;UBERON:0000922,1.02e-10,592;UBERON:0000483,1.25e-10,306;UBERON:0000923,1.30e-10,560;UBERON:0010316,1.30e-10,560;UBERON:0005291,1.30e-10,560;UBERON:0006598,1.30e-10,560;UBERON:0010317,1.30e-10,560;UBERON:0002532,1.30e-10,560;UBERON:0001134,1.34e-10,62;UBERON:0002036,1.34e-10,62;UBERON:0003082,1.34e-10,62;UBERON:0000479,8.00e-10,773;UBERON:0003104,1.73e-09,160;UBERON:0009142,1.73e-09,160;UBERON:0004121,2.30e-09,171;UBERON:0000924,2.30e-09,171;UBERON:0006601,2.30e-09,171;UBERON:0005256,1.39e-08,122;UBERON:0011216,3.48e-08,223;UBERON:0010371,4.88e-07,104;UBERON:0000153,4.99e-07,62;UBERON:0007811,4.99e-07,62;UBERON:0002346,5.45e-07,86;UBERON:0000033,9.08e-07,56 | |||
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|phase1_expression=2.72517568905835,3.42560838225573,6.48390258841467,4.00293193412522,2.23480547213644,1.74467704820074,5.06599756336621,3.15859936713415,2.08948502559871,2.21160542851358,0.697801167972428,0,0.527533956456907,13.6142988256051,4.30816588446291,18.8251041006497,18.0808358407193,14.6062018077475,15.6138495612962,3.81675280038043,3.87601313364081,1.88072832886853,2.0036519099174,0.821246550437305,4.01736446703369,0,0,0,0,0,0,0,1.50602959389125,3.69754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,10.9961803185436,0,2.00535164254356,0.724232594804119,17.4962908351242,1.94653948121054,0.661743720148475,1.33037638477538,1.22968699970376,13.4908447762644,2.18577172975525,2.59549109949101,0,0,0,0,0,0,0,2.58070378531837,0,0,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0.760272105718513,0,0,0,0,0,0,0,0,0.183201743930407,0,0,2.18047026071267,2.48485975847659,5.95163404823525,2.51577443545116,9.46560848471085,4.965357350777,12.8955848032731,4.2699598291882,3.20667812942308,6.53543174339509,4.04132016209064,2.7788523529288,10.1409476522104,10.37116664064,8.20125011418288,14.9836836878554,2.85235910772225,10.7603049997297,8.45528390235107,7.93177427403845,6.03938468819669,16.7406420429012,3.93069815397658,25.108164825711,20.1960485737949,10.8797448882565,0,0.718618141816238,7.07011678607078,9.13365195065338,6.64953877162039,1.31693286264251,0.612975591598039,21.0333282469236,4.53728732640084,5.91985797773244,8.11518077510556,3.81477422087211,5.70173082560364,3.91599611106068,5.66809188100384,4.65292140828975,2.86919764810153,1.16924406193438,2.01947019395292,2.66944706062668,10.6686397500416,12.4253357380815,5.84362169720314,5.4259389539356,4.25173876959253,4.63668405004419,4.87567812161307,0.243947412259191,0.795178609928912,0.232387885739037,2.28054321033815,1.00928340350251,0,1.56449532329816,3.85944562915731,2.76269842704961,1.39310378409594,1.44375896333917,2.9576700009961,3.70886318171824,1.44606617930089,3.41911315470421,1.96091499683166,3.08451804844426,3.37078270400411,1.17732879075208,3.8474715694639,0,8.41450642820675,3.7041661019826,1.47008711385542,0,0,0,0,0,6.00487336044839,5.48751427043128,1.1240175325762,3.51851403440708,0.648119116109707,7.49359102213747,9.35941306751621,8.6598805215164,2.31860809950154,9.27528684462991,0.288732895522148,0,0,0,0,0,0,0,2.81201501960331,7.0552493843521,3.26082723657489,19.7924335173295,13.9504290486702,0.766765358330422,0,0,1.03664057770386,0.288239906833923,0.6312121671319,0.571481048629521,0,0,3.4214489204541,1.02827492703324,0,0,8.52196241024741,13.0788020649984,12.5408468753825,3.10252117818667,3.57656445851882,1.690605505112,3.98907174877306,2.08014873822732,1.02882949704857,0,1.0656887160644,31.5981365984506,1.08524321078289,0.823240336780769,4.88604276440603,26.6543961556909,0,2.1100756394171,2.61460037580088,1.99945982364114,0,0,0,15.3359907514613,21.8237678084816,27.1010119577365,4.92256442669769,4.31500277355805,6.44619467663624,0,0,0,0,2.03275699377971,1.30139853857622,1.54657762555539,1.34013012267479,0.637938751653163,0,0,0,9.44724486237377,5.00170521059677,7.5954206635926,4.36738809214695,1.78428988797162,3.31175071571263,1.99140405487612,8.72743689210385,6.82222512167955,11.3820378421755,3.98535359121262,5.8998133933345,3.21469373531907,7.83204629850962,14.4120238000559,0,0,0,0,1.66435439510497,0.907170879989041,1.98486246255021,1.68808170616869,2.80660094433074,3.97231362692673,2.04682899626681,4.3430558708774,4.45254199334973,10.1778397909753,8.87808626565635,26.3628170804327,37.3863189012207,19.1747124458933,0,3.00759705454927,3.59115856849996,2.52591785962135,1.0925470080403,3.54035920390445,2.25599806453706,3.23464415838542,1.56869953835371,0,2.00548094896464,1.13733384070897,0,7.98888889577916,1.54227252690289,4.87703587578935,0,1.01950509218015,0,0.671624264166535,0,0,0.512900250232778,0.328014645699706,0.976135183992909,6.80070676874967,0,0,10.3367796839311,5.20048196829217,1.6068392984416,99.1841569677171,0.462145851343933,1.68854042198743,1.92971201478343,1.28904293841928,1.74020032697074,2.30111894023472,25.4631621949669,5.12383237619032,5.18913181885787,3.31793052485919,6.2717824130441,1.85938219718914,26.1294247869431,11.1525963225696,1.54016790088044,5.85536633348724,19.1385258256516,9.63685939340384,5.43874569619567,10.048275972711,20.2482831819985,8.38772853264829,1.535386747868,3.42351190427136,8.59148769400029,2.35484592059769,5.21630126991613,4.94166653524899,2.5918728516051,4.65019707618627,1.58510321173008,5.89761838734574,2.43816869544795,3.1682753652067,2.11300293513511,2.04749867111979,8.20151505331534,5.65040583101214,17.0923256499298,1.32687795048244,3.94605796728386,1.73632660280006,3.9353685122798,2.02910376962704,4.64735247149625,3.66204283291914,0.573645408816206,0.0982490410131212,2.496697360368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| ||
|short_description=p1@EDNRA | |||
}} | }} |
Latest revision as of 00:04, 16 September 2015
Short description: | p1@EDNRA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EDNRA_5end |
Coexpression cluster: | C1936_Wilms_extraskeletal_Skeletal_uterus_cervix_lung_salivary |
Association with transcript: | 153bp_to_ENST00000324300, ENST00000511804_5end |
EntrezGene: | EDNRA |
HGNC: | 3179 |
UniProt: | P25101E7ER36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.68e-12 | 76 |
muscle precursor cell | 3.55e-09 | 58 |
myoblast | 3.55e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.55e-09 | 58 |
muscle cell | 1.66e-08 | 55 |
smooth muscle cell | 6.31e-08 | 43 |
smooth muscle myoblast | 6.31e-08 | 43 |
vascular associated smooth muscle cell | 3.52e-07 | 32 |
skin fibroblast | 7.58e-07 | 23 |
electrically responsive cell | 9.83e-07 | 61 |
electrically active cell | 9.83e-07 | 61 |