FFCP PHASE1:Hg19::chr4:149363475..149363492,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:149363475..149363492,-
|short_description=p2@NR3C2
|description=CAGE_peak_2_at_NR3C2_5end
|association_with_transcript=30bp_to_ENST00000342437_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4306 | |EntrezGene=4306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7979 | |HGNC=7979 | ||
|TSSclassifier=strong | |||
|UniProt=B0ZBF8 | |UniProt=B0ZBF8 | ||
|association_with_transcript=30bp_to_ENST00000342437_5end | |||
|cluster_id=chr4:149363475..149363492,- | |||
|description=CAGE_peak_2_at_NR3C2_5end | |||
|id=chr4:149363475..149363492,- | |||
|ontology_enrichment_celltype=CL:0000791!2.22e-10!18;CL:0000789!2.22e-10!18;CL:0002420!2.22e-10!18;CL:0002419!2.22e-10!18;CL:0000790!2.22e-10!18;CL:0000084!8.40e-09!25;CL:0000827!8.40e-09!25;CL:0000625!5.82e-08!11;CL:0000838!2.60e-07!52;CL:0000542!5.81e-07!53;CL:0000051!5.81e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.43e-13;18!CL:0000789;2.43e-13;18!CL:0002419;2.43e-13;18!CL:0000084;5.32e-11;25!CL:0000625;2.25e-10;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.60e-13,18;CL:0000789,2.60e-13,18;CL:0002420,2.60e-13,18;CL:0002419,2.60e-13,18;CL:0000790,2.60e-13,18;CL:0000084,6.46e-11,25;CL:0000827,6.46e-11,25;CL:0000625,3.08e-10,11;CL:0000838,7.30e-08,52;CL:0000542,1.37e-07,53;CL:0000051,1.37e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;2.43e-13;18!UBERON:0007123;2.20e-07;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.58e-45!115;UBERON:0001049!1.94e-16!57;UBERON:0005068!1.94e-16!57;UBERON:0006241!1.94e-16!57;UBERON:0007135!1.94e-16!57;UBERON:0000955!3.23e-14!69;UBERON:0006238!3.23e-14!69;UBERON:0003080!1.21e-13!42;UBERON:0001017!1.88e-13!82;UBERON:0002780!2.16e-13!41;UBERON:0001890!2.16e-13!41;UBERON:0006240!2.16e-13!41;UBERON:0005743!2.85e-13!86;UBERON:0002616!3.15e-13!59;UBERON:0000073!4.52e-11!94;UBERON:0001016!4.52e-11!94;UBERON:0003075!1.02e-10!86;UBERON:0007284!1.02e-10!86;UBERON:0001893!1.80e-10!34;UBERON:0002346!2.59e-10!90;UBERON:0002020!3.18e-10!34;UBERON:0003528!3.18e-10!34;UBERON:0002791!5.38e-10!33;UBERON:0001869!9.41e-10!32;UBERON:0002619!1.02e-09!22;UBERON:0004111!1.09e-08!241;UBERON:0001950!1.21e-08!20;UBERON:0003056!1.24e-08!61;UBERON:0000025!1.80e-08!194;UBERON:0000956!1.13e-07!25;UBERON:0000203!1.13e-07!25;UBERON:0000477!2.25e-07!286;UBERON:0000153!2.72e-07!129;UBERON:0007811!2.72e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.73e-12;22!UBERON:0001869;4.15e-12;32!UBERON:0001893;5.75e-12;34!UBERON:0002780;6.77e-12;41!UBERON:0001890;6.77e-12;41!UBERON:0007023;8.28e-12;114!UBERON:0002791;5.82e-11;32!UBERON:0003528;9.86e-11;34!UBERON:0002020;9.86e-11;34!UBERON:0001950;1.59e-10;20!UBERON:0000073;1.85e-10;53!UBERON:0002616;1.85e-10;53!UBERON:0000956;2.84e-10;25!UBERON:0000203;2.84e-10;25!UBERON:0002046;2.20e-07;5!UBERON:0000955;3.22e-07;68!UBERON:0001017;6.12e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.71e-42,114;UBERON:0000073,3.69e-18,53;UBERON:0002616,3.69e-18,53;UBERON:0001049,7.11e-18,56;UBERON:0005068,7.11e-18,56;UBERON:0006241,7.11e-18,56;UBERON:0007135,7.11e-18,56;UBERON:0002780,2.04e-16,41;UBERON:0001890,2.04e-16,41;UBERON:0003080,2.04e-16,41;UBERON:0006240,2.04e-16,41;UBERON:0000955,1.40e-14,68;UBERON:0006238,1.40e-14,68;UBERON:0001893,6.09e-14,34;UBERON:0001869,6.81e-14,32;UBERON:0003528,1.30e-12,34;UBERON:0002020,1.30e-12,34;UBERON:0002791,1.53e-12,32;UBERON:0002619,2.56e-12,22;UBERON:0001017,3.14e-12,81;UBERON:0003075,4.22e-12,82;UBERON:0007284,4.22e-12,82;UBERON:0002346,5.06e-11,86;UBERON:0001950,1.15e-10,20;UBERON:0001016,1.52e-10,89;UBERON:0011216,2.42e-10,223;UBERON:0000956,2.68e-10,25;UBERON:0000203,2.68e-10,25;UBERON:0003056,5.27e-10,61;UBERON:0010314,3.77e-09,132;UBERON:0004111,9.25e-08,240;UBERON:0000025,1.37e-07,192;UBERON:0010371,2.48e-07,104;UBERON:0002046,2.79e-07,5;UBERON:0004117,2.79e-07,5;UBERON:0007689,2.79e-07,5;UBERON:0007123,2.79e-07,5;UBERON:0003091,2.79e-07,5 | |||
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| ||
|short_description=p2@NR3C2 | |||
}} | }} |
Latest revision as of 00:45, 16 September 2015
Short description: | p2@NR3C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NR3C2_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000342437_5end |
EntrezGene: | NR3C2 |
HGNC: | 7979 |
UniProt: | B0ZBF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.60e-13 | 18 |
alpha-beta T cell | 2.60e-13 | 18 |
immature T cell | 2.60e-13 | 18 |
mature T cell | 2.60e-13 | 18 |
immature alpha-beta T cell | 2.60e-13 | 18 |
T cell | 6.46e-11 | 25 |
pro-T cell | 6.46e-11 | 25 |
CD8-positive, alpha-beta T cell | 3.08e-10 | 11 |
lymphoid lineage restricted progenitor cell | 7.30e-08 | 52 |
lymphocyte | 1.37e-07 | 53 |
common lymphoid progenitor | 1.37e-07 | 53 |