FFCP PHASE1:Hg19::chr7:63774321..63774408,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:63774321..63774408,+
|short_description=p1@ZNF736
|description=CAGE_peak_1_at_ZNF736_5end
|association_with_transcript=0bp_to_ENST00000423484,ENST000004886...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=728927 | |EntrezGene=728927 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32467 | |HGNC=32467 | ||
|TSSclassifier=strong | |||
|UniProt=B4DX44 | |UniProt=B4DX44 | ||
|association_with_transcript=0bp_to_ENST00000423484,ENST00000488621,uc011kdo.1_5end | |||
|cluster_id=chr7:63774321..63774408,+ | |||
|description=CAGE_peak_1_at_ZNF736_5end | |||
|id=chr7:63774321..63774408,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.32e-28!172;CL:0000566!1.32e-28!172;CL:0002032!1.52e-25!165;CL:0000837!1.52e-25!165;CL:0000738!1.72e-24!140;CL:0000988!8.65e-23!182;CL:0002031!8.56e-21!124;CL:0002087!4.97e-20!119;CL:0000542!1.45e-14!53;CL:0000051!1.45e-14!53;CL:0000838!5.21e-14!52;CL:0000763!7.91e-12!112;CL:0000049!7.91e-12!112;CL:0000945!9.14e-10!24;CL:0000826!9.14e-10!24;CL:0000557!5.39e-09!71;CL:0000236!9.02e-09!14;CL:0000451!1.64e-07!10;CL:0000839!2.04e-07!70;CL:0002009!4.14e-07!65;CL:0000791!4.41e-07!18;CL:0000789!4.41e-07!18;CL:0002420!4.41e-07!18;CL:0002419!4.41e-07!18;CL:0000790!4.41e-07!18;CL:0000766!6.09e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.01e-09;24!CL:0000236;3.64e-09;13!CL:0000542;7.06e-09;53!CL:0000451;1.55e-07;10!CL:0000791;4.69e-07;18!CL:0000789;4.69e-07;18!CL:0002419;4.69e-07;18!CL:0002087;7.89e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.71e-31,168;CL:0002032,2.65e-28,161;CL:0000837,2.65e-28,161;CL:0000738,1.89e-27,136;CL:0000988,9.54e-26,177;CL:0002031,1.19e-23,120;CL:0002087,6.83e-23,115;CL:0000542,1.33e-14,53;CL:0000051,1.33e-14,53;CL:0000838,4.78e-14,52;CL:0000763,6.06e-14,108;CL:0000049,6.06e-14,108;CL:0000557,2.54e-11,67;CL:0000945,9.08e-10,24;CL:0000826,9.08e-10,24;CL:0000839,1.76e-09,66;CL:0002009,3.27e-09,61;CL:0000766,7.90e-09,72;CL:0000236,8.97e-09,14;CL:0002194,2.35e-08,59;CL:0000576,2.35e-08,59;CL:0000040,2.35e-08,59;CL:0000559,2.35e-08,59;CL:0000451,1.63e-07,10;CL:0000791,4.39e-07,18;CL:0000789,4.39e-07,18;CL:0002420,4.39e-07,18;CL:0002419,4.39e-07,18;CL:0000790,4.39e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;7.06e-09;53!CL:0000790;4.69e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.19e-15!82;UBERON:0005743!3.99e-15!86;UBERON:0000073!6.96e-15!94;UBERON:0001016!6.96e-15!94;UBERON:0002780!1.33e-14!41;UBERON:0001890!1.33e-14!41;UBERON:0006240!1.33e-14!41;UBERON:0001049!1.98e-14!57;UBERON:0005068!1.98e-14!57;UBERON:0006241!1.98e-14!57;UBERON:0007135!1.98e-14!57;UBERON:0003080!3.90e-14!42;UBERON:0001893!4.01e-13!34;UBERON:0001869!4.22e-13!32;UBERON:0000955!7.59e-13!69;UBERON:0006238!7.59e-13!69;UBERON:0002791!1.09e-12!33;UBERON:0002020!1.10e-12!34;UBERON:0003528!1.10e-12!34;UBERON:0002616!4.55e-12!59;UBERON:0002346!2.93e-11!90;UBERON:0007023!9.58e-11!115;UBERON:0000956!1.84e-10!25;UBERON:0000203!1.84e-10!25;UBERON:0002619!3.48e-10!22;UBERON:0003075!3.79e-10!86;UBERON:0007284!3.79e-10!86;UBERON:0001950!1.08e-09!20;UBERON:0003056!2.54e-09!61;UBERON:0002390!8.09e-09!102;UBERON:0003061!8.09e-09!102;UBERON:0002193!6.19e-08!112;UBERON:0002371!1.29e-07!80;UBERON:0000924!3.16e-07!173;UBERON:0006601!3.16e-07!173;UBERON:0001474!7.10e-07!86;UBERON:0000153!8.95e-07!129;UBERON:0007811!8.95e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.81e-12;32!UBERON:0002791;1.13e-11;32!UBERON:0001893;1.46e-11;34!UBERON:0003528;2.34e-11;34!UBERON:0002020;2.34e-11;34!UBERON:0002780;1.45e-10;41!UBERON:0001890;1.45e-10;41!UBERON:0000956;1.61e-10;25!UBERON:0000203;1.61e-10;25!UBERON:0002619;3.12e-10;22!UBERON:0001950;9.76e-10;20!UBERON:0000073;1.28e-08;53!UBERON:0002616;1.28e-08;53!UBERON:0000955;3.90e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.76e-16,81;UBERON:0001016,1.26e-15,89;UBERON:0001049,8.35e-15,56;UBERON:0005068,8.35e-15,56;UBERON:0006241,8.35e-15,56;UBERON:0007135,8.35e-15,56;UBERON:0002780,1.31e-14,41;UBERON:0001890,1.31e-14,41;UBERON:0003080,1.31e-14,41;UBERON:0006240,1.31e-14,41;UBERON:0000073,2.04e-14,53;UBERON:0002616,2.04e-14,53;UBERON:0000955,3.90e-13,68;UBERON:0006238,3.90e-13,68;UBERON:0001893,3.97e-13,34;UBERON:0001869,4.18e-13,32;UBERON:0003528,1.09e-12,34;UBERON:0002020,1.09e-12,34;UBERON:0002791,1.42e-12,32;UBERON:0002390,1.08e-10,98;UBERON:0003061,1.08e-10,98;UBERON:0007023,1.69e-10,114;UBERON:0000956,1.83e-10,25;UBERON:0000203,1.83e-10,25;UBERON:0002346,2.10e-10,86;UBERON:0002619,3.46e-10,22;UBERON:0002405,3.63e-10,93;UBERON:0001950,1.07e-09,20;UBERON:0002193,1.36e-09,108;UBERON:0002371,1.50e-09,76;UBERON:0003056,1.65e-09,61;UBERON:0003075,2.58e-09,82;UBERON:0007284,2.58e-09,82;UBERON:0001474,1.26e-08,82 | |||
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| ||
|short_description=p1@ZNF736 | |||
}} | }} |
Latest revision as of 04:20, 19 September 2015
Short description: | p1@ZNF736 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF736_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000423484, ENST00000488621, uc011kdo.1_5end |
EntrezGene: | ZNF736 |
HGNC: | 32467 |
UniProt: | B4DX44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.71e-31 | 168 |
hematopoietic oligopotent progenitor cell | 2.65e-28 | 161 |
hematopoietic multipotent progenitor cell | 2.65e-28 | 161 |
leukocyte | 1.89e-27 | 136 |
hematopoietic cell | 9.54e-26 | 177 |
hematopoietic lineage restricted progenitor cell | 1.19e-23 | 120 |
nongranular leukocyte | 6.83e-23 | 115 |
lymphocyte | 1.33e-14 | 53 |
common lymphoid progenitor | 1.33e-14 | 53 |
lymphoid lineage restricted progenitor cell | 4.78e-14 | 52 |
myeloid cell | 6.06e-14 | 108 |
common myeloid progenitor | 6.06e-14 | 108 |
granulocyte monocyte progenitor cell | 2.54e-11 | 67 |
lymphocyte of B lineage | 9.08e-10 | 24 |
pro-B cell | 9.08e-10 | 24 |
myeloid lineage restricted progenitor cell | 1.76e-09 | 66 |
macrophage dendritic cell progenitor | 3.27e-09 | 61 |
myeloid leukocyte | 7.90e-09 | 72 |
B cell | 8.97e-09 | 14 |
monopoietic cell | 2.35e-08 | 59 |
monocyte | 2.35e-08 | 59 |
monoblast | 2.35e-08 | 59 |
promonocyte | 2.35e-08 | 59 |
dendritic cell | 1.63e-07 | 10 |
mature alpha-beta T cell | 4.39e-07 | 18 |
alpha-beta T cell | 4.39e-07 | 18 |
immature T cell | 4.39e-07 | 18 |
mature T cell | 4.39e-07 | 18 |
immature alpha-beta T cell | 4.39e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.76e-16 | 81 |
nervous system | 1.26e-15 | 89 |
neural tube | 8.35e-15 | 56 |
neural rod | 8.35e-15 | 56 |
future spinal cord | 8.35e-15 | 56 |
neural keel | 8.35e-15 | 56 |
regional part of forebrain | 1.31e-14 | 41 |
forebrain | 1.31e-14 | 41 |
anterior neural tube | 1.31e-14 | 41 |
future forebrain | 1.31e-14 | 41 |
regional part of nervous system | 2.04e-14 | 53 |
regional part of brain | 2.04e-14 | 53 |
brain | 3.90e-13 | 68 |
future brain | 3.90e-13 | 68 |
telencephalon | 3.97e-13 | 34 |
cerebral hemisphere | 4.18e-13 | 32 |
brain grey matter | 1.09e-12 | 34 |
gray matter | 1.09e-12 | 34 |
regional part of telencephalon | 1.42e-12 | 32 |
hematopoietic system | 1.08e-10 | 98 |
blood island | 1.08e-10 | 98 |
adult organism | 1.69e-10 | 114 |
cerebral cortex | 1.83e-10 | 25 |
pallium | 1.83e-10 | 25 |
neurectoderm | 2.10e-10 | 86 |
regional part of cerebral cortex | 3.46e-10 | 22 |
immune system | 3.63e-10 | 93 |
neocortex | 1.07e-09 | 20 |
hemolymphoid system | 1.36e-09 | 108 |
bone marrow | 1.50e-09 | 76 |
pre-chordal neural plate | 1.65e-09 | 61 |
neural plate | 2.58e-09 | 82 |
presumptive neural plate | 2.58e-09 | 82 |
bone element | 1.26e-08 | 82 |