FFCP PHASE1:Hg19::chr13:93879041..93879078,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10082 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4454 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y625 | |||
|association_with_transcript=0bp_to_NM_005708,uc001vlt.2,uc010tig.1_5end | |||
|cluster_id=chr13:93879041..93879078,+ | |||
|coexpression_cluster_id=C1192 | |||
|description=CAGE_peak_1_at_GPC6_5end | |||
|id=chr13:93879041..93879078,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.92e-23!180;CL:0000057!1.09e-10!75;CL:0002319!2.35e-08!25;CL:0000393!4.53e-08!60;CL:0000211!4.53e-08!60;CL:0000680!3.77e-07!57;CL:0000056!3.77e-07!57;CL:0000355!3.77e-07!57;CL:0000187!6.10e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.41e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.97e-11,76;CL:0000393,1.83e-08,61;CL:0000211,1.83e-08,61;CL:0002319,2.93e-08,25;CL:0000680,1.63e-07,58;CL:0000056,1.63e-07,58;CL:0000355,1.63e-07,58;CL:0000187,2.67e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.72e-26!365;UBERON:0000481!5.75e-19!347;UBERON:0000119!2.47e-16!312;UBERON:0000483!8.56e-16!309;UBERON:0000073!4.04e-15!94;UBERON:0001016!4.04e-15!94;UBERON:0005743!8.50e-13!86;UBERON:0001017!2.68e-12!82;UBERON:0002100!4.80e-12!216;UBERON:0000468!3.27e-11!659;UBERON:0005256!5.64e-11!143;UBERON:0000924!5.72e-11!173;UBERON:0006601!5.72e-11!173;UBERON:0000025!8.29e-11!194;UBERON:0002346!1.51e-10!90;UBERON:0004121!4.10e-10!169;UBERON:0003075!1.39e-09!86;UBERON:0007284!1.39e-09!86;UBERON:0000477!1.84e-09!286;UBERON:0000922!3.34e-09!612;UBERON:0000955!4.90e-09!69;UBERON:0006238!4.90e-09!69;UBERON:0004111!5.27e-09!241;UBERON:0000033!1.60e-08!123;UBERON:0002417!1.81e-08!61;UBERON:0000916!1.81e-08!61;UBERON:0002050!2.44e-08!605;UBERON:0005423!2.44e-08!605;UBERON:0002107!4.74e-08!19;UBERON:0006925!4.74e-08!19;UBERON:0008836!4.74e-08!19;UBERON:0000923!4.85e-08!604;UBERON:0005291!4.85e-08!604;UBERON:0006598!4.85e-08!604;UBERON:0002532!4.85e-08!604;UBERON:0003056!6.32e-08!61;UBERON:0000153!6.88e-08!129;UBERON:0007811!6.88e-08!129;UBERON:0009569!1.23e-07!113;UBERON:0003104!2.46e-07!238;UBERON:0009142!2.46e-07!238;UBERON:0000466!4.04e-07!126;UBERON:0000480!5.06e-07!626;UBERON:0000467!5.41e-07!625;UBERON:0001134!5.92e-07!61;UBERON:0002036!5.92e-07!61;UBERON:0003082!5.92e-07!61;UBERON:0002385!6.29e-07!63;UBERON:0001015!6.29e-07!63;UBERON:0000383!6.29e-07!63;UBERON:0002616!9.29e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.70e-08;19!UBERON:0006925;6.70e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.51e-15,309;UBERON:0011216,3.33e-15,223;UBERON:0000483,5.16e-15,306;UBERON:0001016,1.15e-14,89;UBERON:0003104,6.01e-13,160;UBERON:0009142,6.01e-13,160;UBERON:0001017,2.64e-12,81;UBERON:0010314,6.51e-11,132;UBERON:0002346,7.11e-11,86;UBERON:0004121,1.31e-10,171;UBERON:0000924,1.31e-10,171;UBERON:0006601,1.31e-10,171;UBERON:0000025,2.35e-10,192;UBERON:0002100,2.47e-10,199;UBERON:0003075,5.18e-10,82;UBERON:0007284,5.18e-10,82;UBERON:0005256,8.28e-10,122;UBERON:0000922,3.17e-09,592;UBERON:0000955,5.63e-09,68;UBERON:0006238,5.63e-09,68;UBERON:0004111,2.17e-08,240;UBERON:0003056,3.75e-08,61;UBERON:0005423,4.57e-08,581;UBERON:0002107,6.91e-08,19;UBERON:0006925,6.91e-08,19;UBERON:0008836,6.91e-08,19;UBERON:0000479,7.11e-08,773;UBERON:0002417,1.12e-07,60;UBERON:0000916,1.12e-07,60;UBERON:0000923,4.45e-07,560;UBERON:0010316,4.45e-07,560;UBERON:0005291,4.45e-07,560;UBERON:0006598,4.45e-07,560;UBERON:0010317,4.45e-07,560;UBERON:0002532,4.45e-07,560;UBERON:0007524,5.18e-07,73;UBERON:0001134,5.78e-07,62;UBERON:0002036,5.78e-07,62;UBERON:0003082,5.78e-07,62;UBERON:0009569,5.96e-07,112;UBERON:0002385,6.10e-07,64;UBERON:0001015,6.10e-07,64;UBERON:0000383,6.10e-07,64;UBERON:0001048,7.05e-07,160;UBERON:0002050,7.46e-07,564;UBERON:0003077,9.88e-07,72;UBERON:0007285,9.88e-07,72 | |||
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| |||
|short_description=p1@GPC6 | |||
}} |
Latest revision as of 04:52, 18 September 2015
Short description: | p1@GPC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPC6_5end |
Coexpression cluster: | C1192_extraskeletal_Cardiac_Lens_cholangiocellular_pineal_Fibroblast_rectum |
Association with transcript: | 0bp_to_NM_005708, uc001vlt.2, uc010tig.1_5end |
EntrezGene: | GPC6 |
HGNC: | 4454 |
UniProt: | Q9Y625 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.97e-11 | 76 |
electrically responsive cell | 1.83e-08 | 61 |
electrically active cell | 1.83e-08 | 61 |
neural cell | 2.93e-08 | 25 |
muscle precursor cell | 1.63e-07 | 58 |
myoblast | 1.63e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.63e-07 | 58 |
muscle cell | 2.67e-07 | 55 |