FFCP PHASE1:Hg19::chr8:145555308..145555319,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:145555308..145555319,-
|short_description=p3@SCRT1
|description=CAGE_peak_3_at_SCRT1_5end
|association_with_transcript=200bp_to_AL512683_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83482 | |EntrezGene=83482 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=15950 | |HGNC=15950 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=200bp_to_AL512683_5end | |||
|cluster_id=chr8:145555308..145555319,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_SCRT1_5end | |||
|id=chr8:145555308..145555319,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;9.67e-10;6!CL:0000404;9.67e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.01e-09,6;CL:0000031,1.01e-09,6;CL:0000404,1.01e-09,6;CL:0000047,1.65e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.58e-19;3!CL:0000031;9.67e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p3@SCRT1 | |||
}} | }} |
Latest revision as of 01:31, 17 September 2015
Short description: | p3@SCRT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SCRT1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 200bp_to_AL512683_5end |
EntrezGene: | SCRT1 |
HGNC: | 15950 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.01e-09 | 6 |
neuroblast | 1.01e-09 | 6 |
electrically signaling cell | 1.01e-09 | 6 |
neuronal stem cell | 1.65e-07 | 8 |