FFCP PHASE1:Hg19::chr14:70233822..70233868,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6430 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10787 | |||
|TSSclassifier=strong | |||
|UniProt=Q13243,B4DUA4,G3V5K8,Q6FGE0 | |||
|association_with_transcript=0bp_to_ENST00000451983,ENST00000553369,ENST00000553548,ENST00000557154,ENST00000557337,ENST00000557435,NM_001039465,NM_006925,uc001xln.1,uc001xlo.2,uc001xlp.2,uc001xlq.2_5end | |||
|cluster_id=chr14:70233822..70233868,+ | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_SRSF5_5end | |||
|id=chr14:70233822..70233868,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.99e-41!172;CL:0000566!2.99e-41!172;CL:0000738!1.37e-40!140;CL:0002032!1.09e-37!165;CL:0000837!1.09e-37!165;CL:0000988!2.64e-35!182;CL:0002031!1.79e-32!124;CL:0002087!4.45e-30!119;CL:0000763!2.23e-22!112;CL:0000049!2.23e-22!112;CL:0002057!7.97e-22!42;CL:0000766!2.81e-21!76;CL:0000860!4.15e-20!45;CL:0000557!2.68e-17!71;CL:0000839!4.91e-17!70;CL:0002009!1.63e-15!65;CL:0002194!1.71e-14!63;CL:0000576!1.71e-14!63;CL:0000040!1.71e-14!63;CL:0000559!1.71e-14!63;CL:0000542!5.03e-14!53;CL:0000051!5.03e-14!53;CL:0000838!5.03e-14!52;CL:0000791!4.31e-10!18;CL:0000789!4.31e-10!18;CL:0002420!4.31e-10!18;CL:0002419!4.31e-10!18;CL:0000790!4.31e-10!18;CL:0000084!3.26e-08!25;CL:0000827!3.26e-08!25;CL:0000625!3.07e-07!11;CL:0000236!6.06e-07!14;CL:0000094!6.26e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.54e-16;33!CL:0002057;9.54e-16;33!CL:0000576;9.20e-13;48!CL:0000766;4.86e-11;69!CL:0002087;6.57e-11;104!CL:0000473;2.04e-10;39!CL:0000234;2.04e-10;39!CL:0000791;4.35e-10;18!CL:0000789;4.35e-10;18!CL:0002419;4.35e-10;18!CL:0000738;5.88e-09;136!CL:0000542;8.90e-09;53!CL:0000084;3.31e-08;25!CL:0000763;1.79e-07;100!CL:0000625;3.08e-07;11!CL:0000094;6.26e-07;8!CL:0000236;6.41e-07;13!CL:0000988;7.22e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.78e-42,168;CL:0000738,7.39e-42,136;CL:0002032,1.10e-38,161;CL:0000837,1.10e-38,161;CL:0000988,5.63e-37,177;CL:0002031,1.20e-33,120;CL:0002087,3.19e-31,115;CL:0000763,2.64e-23,108;CL:0000049,2.64e-23,108;CL:0000766,1.42e-22,72;CL:0000860,7.97e-22,42;CL:0002057,7.97e-22,42;CL:0000557,1.94e-18,67;CL:0000839,3.57e-18,66;CL:0000473,6.05e-18,48;CL:0000234,6.05e-18,48;CL:0002009,1.24e-16,61;CL:0002194,1.42e-15,59;CL:0000576,1.42e-15,59;CL:0000040,1.42e-15,59;CL:0000559,1.42e-15,59;CL:0000542,5.03e-14,53;CL:0000051,5.03e-14,53;CL:0000838,5.03e-14,52;CL:0000791,4.31e-10,18;CL:0000789,4.31e-10,18;CL:0002420,4.31e-10,18;CL:0002419,4.31e-10,18;CL:0000790,4.31e-10,18;CL:0000084,3.26e-08,25;CL:0000827,3.26e-08,25;CL:0000625,3.07e-07,11;CL:0000236,6.06e-07,14;CL:0000094,6.26e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;8.00e-16;42!CL:0000790;4.35e-10;18!CL:0000051;8.90e-09;53!CL:0000049;6.31e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.39e-18!102;UBERON:0003061!2.39e-18!102;UBERON:0002193!9.79e-15!112;UBERON:0002371!3.50e-14!80;UBERON:0001474!8.26e-14!86;UBERON:0007023!1.00e-12!115;UBERON:0004765!9.39e-11!101;UBERON:0001434!9.39e-11!101;UBERON:0001049!2.59e-09!57;UBERON:0005068!2.59e-09!57;UBERON:0006241!2.59e-09!57;UBERON:0007135!2.59e-09!57;UBERON:0002780!6.97e-09!41;UBERON:0001890!6.97e-09!41;UBERON:0006240!6.97e-09!41;UBERON:0002405!8.58e-09!115;UBERON:0003080!2.06e-08!42;UBERON:0002020!7.83e-07!34;UBERON:0003528!7.83e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.40e-19,98;UBERON:0003061,3.40e-19,98;UBERON:0002193,2.28e-15,108;UBERON:0002371,5.04e-15,76;UBERON:0001474,1.42e-14,82;UBERON:0004765,1.87e-12,90;UBERON:0007023,1.88e-12,114;UBERON:0002405,7.83e-12,93;UBERON:0001434,2.49e-10,100;UBERON:0001049,9.97e-10,56;UBERON:0005068,9.97e-10,56;UBERON:0006241,9.97e-10,56;UBERON:0007135,9.97e-10,56;UBERON:0000073,4.97e-09,53;UBERON:0002616,4.97e-09,53;UBERON:0002780,6.97e-09,41;UBERON:0001890,6.97e-09,41;UBERON:0003080,6.97e-09,41;UBERON:0006240,6.97e-09,41;UBERON:0003528,7.83e-07,34;UBERON:0002020,7.83e-07,34 | |||
|phase1_expression=118.817660042944,135.09743057521,161.815655902175,95.0696334354739,126.93695081735,136.957148283758,124.116940302472,97.9165803811588,139.473125458714,59.2218786968636,50.2416840940148,98.7355002028379,79.1300934685361,240.849322860251,207.123359829947,207.076145107147,195.273027079769,189.880623500717,194.197253918622,102.559841377964,61.6082087557644,71.1542217755259,218.970530155258,157.268714408744,156.175043655935,260.264059977522,263.214489776526,251.16610317195,1825.21024457891,1377.94753916899,1061.88378982497,89.1838587744559,75.3014796945625,94.6570266026976,360.145015497822,295.427665108862,732.239495701109,1075.85908336891,914.282136016376,956.149896374043,266.90724529399,330.695433005378,294.408873805875,381.815775035137,447.40511732755,520.100227186678,654.055309852597,732.290008566872,820.721882872024,783.386384293216,840.20711741545,1014.03580176225,951.153333152331,1059.88585044464,1048.20100624021,528.584489435634,596.845750176509,807.880926580079,802.245881904136,955.405713605531,1025.49674978166,508.960556188103,603.178100647815,628.681507035724,839.575327352494,1053.63436225145,1277.40843268992,729.626123905582,855.75346912755,970.182569297756,661.096256875639,1141.29239392546,1287.05252972208,770.025518607028,757.50912077545,712.839394728478,609.495152600882,674.144071965522,786.912472468904,779.509854132315,736.190622313832,778.697287498635,670.54569139764,658.097026570868,798.779309969472,599.555962705943,882.472755427371,773.04203173878,678.232039477269,768.013272400968,950.016445443669,984.209529385693,968.298086841205,713.72517432674,1151.28458836408,567.065934520741,1094.29645114325,760.868836682383,905.880204591838,518.946881692665,1238.83053547428,1331.33522972607,1213.77051798129,526.637229696216,1105.36136484559,935.316102932048,1057.21828413862,368.903000809944,383.414956606521,416.850088170319,400.983875807266,565.405820269087,1159.15606423783,1294.36252629803,1234.56453613678,414.598884930395,1016.3007490323,1081.39557093384,1264.08638132944,827.314380999679,766.325225189005,805.983333692221,810.395290876573,972.314284940117,794.55942087292,724.301614002648,775.144829093468,1147.14236894873,846.448219654801,874.304926240457,236.492660324543,110.6656418511,109.450352938062,161.201861963517,133.857222139783,207.130522113978,214.727205703797,287.114573478555,233.595533212412,180.931188329452,189.283963168687,280.229732027356,53.5514073790037,87.1343440543409,226.534080770969,227.761696387442,197.176655449477,795.12774143401,816.808732594023,865.495978097886,104.549026274887,95.4860400567798,115.944927536936,94.4064263013096,92.7093754023892,139.484847263614,92.1667802427335,203.8908229846,209.902094985159,240.329399965033,95.4705481548678,86.6710200519104,106.899181206098,182.360887851551,102.888027380983,249.860639738855,271.680540877665,198.871874533547,95.0563152288476,71.1949244676097,119.997142274417,2229.72466301819,2295.65916375809,53.6395684135317,204.752444098471,154.235963207458,526.856130455798,295.728555992027,155.34475140288,102.604000826042,77.9267668826846,110.013726594053,279.46750978899,171.621396216783,152.67341750797,131.68096205109,140.01074964864,55.7685007764436,144.530115572438,94.1278505548341,162.301267079256,147.027992301994,127.717753106456,132.304659913518,207.828946337481,142.487808081651,211.30122250444,191.268460022411,118.440859124429,48.2385521827154,43.8357066507905,154.869224837741,133.251223663642,201.702676072485,185.687533632594,150.485507737319,132.960682132338,144.172304796387,274.466142603959,258.617997859285,209.176786444488,282.685812511507,265.669420376695,336.478545299592,183.697337199279,316.286846620133,163.791605675975,266.822499376029,269.245953528726,302.763064421635,353.944563739065,170.77480649585,125.13571712514,173.161724434314,191.740522775357,194.166711078356,280.173602979681,352.661713503472,250.165558998073,231.889780069384,215.734327498662,252.564332480474,131.417607157045,137.653560773277,58.0166669680418,295.338002228339,144.375896333917,149.539795250363,158.97536274365,177.143106964359,152.095388397971,161.012909184288,174.631175665767,144.943656272177,153.641407193146,163.902288859162,66.4339909162183,61.7063804735162,62.9708237337042,54.3932232126505,410.686312822732,378.388478420886,361.563422889019,368.621688011233,285.825131174196,150.808105252404,200.40402115615,77.5572097477575,199.650539209499,177.029107143109,45.9389710487558,47.8370001228606,147.217968865779,131.233218431787,121.635407228311,121.556549014824,109.727566480657,167.613908118681,193.600077500022,187.149983336682,198.450906906442,147.188682772581,134.36257070901,172.47025453567,238.534622042381,278.446290984047,171.235895407846,179.611774001628,87.0278681705029,890.735134115866,436.191942101522,781.212339357629,698.837654118846,727.408901402801,207.193629075348,142.863671158796,84.3965619912338,75.2718762499903,162.570265963954,206.035337680927,308.406720808394,101.815024585588,125.120539755151,131.935576191889,214.332504726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| |||
|short_description=p1@SRSF5 | |||
}} |
Latest revision as of 19:28, 15 September 2015
Short description: | p1@SRSF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SRSF5_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000451983, ENST00000553369, ENST00000553548, ENST00000557154, ENST00000557337, ENST00000557435, NM_001039465, NM_006925, uc001xln.1, uc001xlo.2, uc001xlp.2, uc001xlq.2_5end |
EntrezGene: | SRSF5 |
HGNC: | 10787 |
UniProt: | Q13243B4DUA4G3V5K8Q6FGE0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.40e-19 | 98 |
blood island | 3.40e-19 | 98 |
hemolymphoid system | 2.28e-15 | 108 |
bone marrow | 5.04e-15 | 76 |
bone element | 1.42e-14 | 82 |
skeletal element | 1.87e-12 | 90 |
adult organism | 1.88e-12 | 114 |
immune system | 7.83e-12 | 93 |
skeletal system | 2.49e-10 | 100 |
neural tube | 9.97e-10 | 56 |
neural rod | 9.97e-10 | 56 |
future spinal cord | 9.97e-10 | 56 |
neural keel | 9.97e-10 | 56 |
regional part of nervous system | 4.97e-09 | 53 |
regional part of brain | 4.97e-09 | 53 |
regional part of forebrain | 6.97e-09 | 41 |
forebrain | 6.97e-09 | 41 |
anterior neural tube | 6.97e-09 | 41 |
future forebrain | 6.97e-09 | 41 |
brain grey matter | 7.83e-07 | 34 |
gray matter | 7.83e-07 | 34 |