FFCP PHASE1:Hg19::chr19:18529684..18529699,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=170463 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15676 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BWG4,Q9BWW5 | |||
|association_with_transcript=-446bp_to_NM_001009998,NM_032627_5end | |||
|cluster_id=chr19:18529684..18529699,+ | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_6_at_SSBP4_5end | |||
|id=chr19:18529684..18529699,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.93e-23!42;CL:0002009!8.22e-23!65;CL:0000860!1.01e-22!45;CL:0002194!1.27e-21!63;CL:0000576!1.27e-21!63;CL:0000040!1.27e-21!63;CL:0000559!1.27e-21!63;CL:0000557!3.38e-20!71;CL:0000839!1.57e-18!70;CL:0000766!6.81e-18!76;CL:0000763!1.75e-15!112;CL:0000049!1.75e-15!112;CL:0002393!1.20e-09!9;CL:0002397!1.20e-09!9;CL:0002087!5.69e-08!119;CL:0000134!4.62e-07!358;CL:0002031!6.17e-07!124;CL:0000037!8.50e-07!172;CL:0000566!8.50e-07!172;CL:0000738!9.71e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000576;4.96e-17;48!CL:0000860;1.55e-16;33!CL:0002057;1.55e-16;33!CL:0000473;6.70e-14;39!CL:0000234;6.70e-14;39!CL:0000766;5.74e-13;69!CL:0000875;2.95e-12;3!CL:0002396;2.95e-12;3!CL:0002393;9.05e-10;6!CL:0002397;9.05e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.11e-32,48;CL:0000234,8.11e-32,48;CL:0000860,6.47e-31,42;CL:0002057,6.47e-31,42;CL:0002009,1.11e-25,61;CL:0002194,3.03e-24,59;CL:0000576,3.03e-24,59;CL:0000040,3.03e-24,59;CL:0000559,3.03e-24,59;CL:0000557,7.32e-23,67;CL:0000766,8.34e-23,72;CL:0000839,4.35e-21,66;CL:0002393,3.64e-19,9;CL:0002397,3.64e-19,9;CL:0000763,7.04e-16,108;CL:0000049,7.04e-16,108;CL:0000875,2.98e-12,3;CL:0002396,2.98e-12,3;CL:0000738,2.70e-10,136;CL:0002031,3.15e-10,120;CL:0002087,8.85e-10,115;CL:0002032,1.45e-08,161;CL:0000837,1.45e-08,161;CL:0000037,5.90e-08,168;CL:0000988,3.01e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.25e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.60e-18!80;UBERON:0001474!2.52e-18!86;UBERON:0002390!9.46e-17!102;UBERON:0003061!9.46e-17!102;UBERON:0004765!5.05e-16!101;UBERON:0001434!5.05e-16!101;UBERON:0001950!1.49e-13!20;UBERON:0002020!1.95e-13!34;UBERON:0003528!1.95e-13!34;UBERON:0002193!2.27e-13!112;UBERON:0001869!2.69e-13!32;UBERON:0002619!4.10e-13!22;UBERON:0001893!7.80e-13!34;UBERON:0002791!4.67e-12!33;UBERON:0000956!1.32e-11!25;UBERON:0000203!1.32e-11!25;UBERON:0002780!1.11e-10!41;UBERON:0001890!1.11e-10!41;UBERON:0006240!1.11e-10!41;UBERON:0003080!3.40e-10!42;UBERON:0002405!1.07e-09!115;UBERON:0002204!5.57e-08!167;UBERON:0001049!1.32e-07!57;UBERON:0005068!1.32e-07!57;UBERON:0006241!1.32e-07!57;UBERON:0007135!1.32e-07!57;UBERON:0002616!5.04e-07!59;UBERON:0000062!8.27e-07!511;UBERON:0003081!9.71e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.33e-33;20!UBERON:0002619;2.38e-30;22!UBERON:0000956;2.06e-26;25!UBERON:0000203;2.06e-26;25!UBERON:0001869;4.31e-23;32!UBERON:0001893;1.59e-22;34!UBERON:0002791;6.84e-20;32!UBERON:0003528;1.56e-18;34!UBERON:0002020;1.56e-18;34!UBERON:0000200;3.93e-15;6!UBERON:0002780;1.90e-13;41!UBERON:0001890;1.90e-13;41!UBERON:0001872;1.69e-11;5!UBERON:0002021;8.54e-11;5!UBERON:0001871;3.25e-08;6!UBERON:0002771;4.43e-08;2!UBERON:0000073;5.82e-08;53!UBERON:0002616;5.82e-08;53!UBERON:0001017;1.41e-07;75!UBERON:0000955;2.68e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.80e-34,20;UBERON:0002619,5.77e-31,22;UBERON:0000956,5.96e-27,25;UBERON:0000203,5.96e-27,25;UBERON:0001869,1.17e-26,32;UBERON:0001893,6.97e-25,34;UBERON:0002791,2.12e-23,32;UBERON:0003528,7.87e-22,34;UBERON:0002020,7.87e-22,34;UBERON:0002780,5.25e-20,41;UBERON:0001890,5.25e-20,41;UBERON:0003080,5.25e-20,41;UBERON:0006240,5.25e-20,41;UBERON:0002371,1.83e-19,76;UBERON:0001474,1.30e-17,82;UBERON:0002390,1.07e-16,98;UBERON:0003061,1.07e-16,98;UBERON:0004765,1.56e-15,90;UBERON:0000200,3.56e-15,6;UBERON:0000955,5.73e-15,68;UBERON:0006238,5.73e-15,68;UBERON:0002405,7.62e-15,93;UBERON:0001434,9.42e-15,100;UBERON:0000073,1.31e-14,53;UBERON:0002616,1.31e-14,53;UBERON:0002193,1.45e-14,108;UBERON:0001049,1.28e-13,56;UBERON:0005068,1.28e-13,56;UBERON:0006241,1.28e-13,56;UBERON:0007135,1.28e-13,56;UBERON:0001017,3.15e-13,81;UBERON:0003056,3.47e-12,61;UBERON:0001872,1.25e-11,5;UBERON:0001016,1.99e-11,89;UBERON:0002021,2.34e-11,5;UBERON:0003075,3.48e-09,82;UBERON:0007284,3.48e-09,82;UBERON:0007023,3.83e-09,114;UBERON:0002346,1.43e-08,86;UBERON:0001871,3.57e-08,6;UBERON:0002771,3.61e-08,2;UBERON:0010371,2.69e-07,104;UBERON:0002204,3.00e-07,167 | |||
|phase1_expression=0,0,0.281908808191942,1.0007329835313,0,0,0,0,0.522371256399677,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,2.75354993794233,0,1.08371286321253,0,0,0,0,0,0,1.10799081706375,0.802177789880567,0.868043482863407,0.223915474239924,0,0.257575567634187,1.89017710413434,1.51150377475524,1.94067248950253,0.697287110717054,1.23350366406548,0.619412741790207,1.43846196161075,1.0246428261164,0.709446689665756,0.344745680736619,0,0,0.564727018627814,0.545812300115692,1.79778787556068,1.83650335422542,0.962787081228281,0,0.329851300186716,1.59570926097305,1.27867425159808,0.580418477257168,1.70215567407342,1.24564449799115,2.51248665256743,0.521482918420201,1.08594422352558,0,0,0,2.5350634357433,2.97646019951061,2.09658645508376,0.673971786878971,0.901061357049038,0.64290234678832,11.6855224933912,9.54800050555633,6.02791707423292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.196468613246569,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0.204154171254893,0,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0.612975591598039,0,0.113432183160021,0.179389635688862,0.427114777637135,0,0.600182192168805,0.103052529238439,0.257640540045629,0.558350568994769,0.168776332241266,0.292311015483596,0.252433774244115,0.368199594569197,0.484938170456436,0.710019185033229,0.201504196455281,0,0.386521706326594,0,0,0,0,0,0.207322110030741,0,0,0,0.643240938192885,0,1.39310378409594,0,0.354920400119532,0,0,0.110293972732394,0.435758888184812,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0.063497894292169,1.52795370223311,0,1.71072446022705,0.102827492703324,0.600686115687835,0.571652865261156,0,0,0.07333828582095,0.129271715757778,3.57656445851882,0,0.26593811658487,0,0.257207374262142,0,0,0,1.08524321078289,0,0.325736184293735,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0,0,0,0.560425719967636,0.197030760201927,0.215627574859517,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0.664225598535437,0,0,0,0,0.620304078368662,0.647142602455851,0.426910231213777,0,0,0.604780586659361,1.24053903909388,0,0.280660094433074,0.512556597022804,0,0.160853921143607,0,0,0,0.246381468041427,0.519254429183621,0.116210378459959,0,0,0.0920809889358963,0,0,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,0.267096106940212,0,0,0,0.2023155617111,0,0,0,0,0.532306030317022,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0.141405431953713,1.13008116620243,0,0,0.438450885253763,0.578775534266688,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,2.29391162142713,1.13929437434833,0.714695326373367,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0.59873811429845,0,1.05836791361941,0.324621940274555,0,0,0.94007937463814,0,0,0,0.201799707191048,0.425846237690326,0.343505344755765,0,0,0.166849141711909,0.586164286206121,0,0,0.811367035427949,0,0,0,0.293016358543788,0,0,0,0,0,0.307160702099232,0.994147647766298,1.1253553312841,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0,0.179021174675609,0,0,0,0,2.90799823828566,1.20598527610407,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0.110579259931225,0,1.31631238292384,0,0,0.0769502585037971,0,0,0.269272933229316,0,0.31900115973192,0.183195186803725,0,0,0.156980256395025,0,0,0.19606253431774,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0.789168805698781,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0.520679215005393,0,0,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0,0,0.529536760149002,0.225980740780532,0,0,2.15256706249988,0,0,0,0.19980960958213,0.432271251462318,0.229073192331831,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0.164831716762333,0.0674035438541849,0,0,0,0.408610218334727,0.160753148465019,0,0,0.2249738915515,2.32140586367385,1.82248669974074,0,0,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0.146552233678082,0,0.129282956361551,0.39669780522807,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0.157054096250234,0,1.58634144372552,4.63206443614049,0,0,0.124192805882767,0,0,0.151649117541648,0,0,0,0,0,0,0,0.378806010550178,0.50313580350515,0,0.457680136793847,0.15123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| |||
|short_description=p6@SSBP4 | |||
}} |
Latest revision as of 16:01, 16 September 2015
Short description: | p6@SSBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SSBP4_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | -446bp_to_NM_001009998, NM_032627_5end |
EntrezGene: | SSBP4 |
HGNC: | 15676 |
UniProt: | Q9BWG4Q9BWW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.11e-32 | 48 |
phagocyte | 8.11e-32 | 48 |
classical monocyte | 6.47e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.47e-31 | 42 |
macrophage dendritic cell progenitor | 1.11e-25 | 61 |
monopoietic cell | 3.03e-24 | 59 |
monocyte | 3.03e-24 | 59 |
monoblast | 3.03e-24 | 59 |
promonocyte | 3.03e-24 | 59 |
granulocyte monocyte progenitor cell | 7.32e-23 | 67 |
myeloid leukocyte | 8.34e-23 | 72 |
myeloid lineage restricted progenitor cell | 4.35e-21 | 66 |
intermediate monocyte | 3.64e-19 | 9 |
CD14-positive, CD16-positive monocyte | 3.64e-19 | 9 |
myeloid cell | 7.04e-16 | 108 |
common myeloid progenitor | 7.04e-16 | 108 |
non-classical monocyte | 2.98e-12 | 3 |
CD14-low, CD16-positive monocyte | 2.98e-12 | 3 |
leukocyte | 2.70e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 3.15e-10 | 120 |
nongranular leukocyte | 8.85e-10 | 115 |
hematopoietic oligopotent progenitor cell | 1.45e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.45e-08 | 161 |
hematopoietic stem cell | 5.90e-08 | 168 |
hematopoietic cell | 3.01e-07 | 177 |