FFCP PHASE1:Hg19::chr19:50031252..50031285,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57333 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21145 | |||
|TSSclassifier=strong | |||
|UniProt=Q96D15 | |||
|association_with_transcript=377bp_to_ENST00000270645,NM_020650,uc002poj.2_5end | |||
|cluster_id=chr19:50031252..50031285,+ | |||
|coexpression_cluster_id=C750 | |||
|description=CAGE_peak_1_at_RCN3_5end | |||
|id=chr19:50031252..50031285,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.87e-48!180;CL:0000057!2.44e-24!75;CL:0000680!8.18e-24!57;CL:0000056!8.18e-24!57;CL:0000355!8.18e-24!57;CL:0000183!1.19e-23!59;CL:0000187!2.20e-22!54;CL:0000393!1.59e-20!60;CL:0000211!1.59e-20!60;CL:0000192!7.31e-20!42;CL:0000514!7.31e-20!42;CL:0000222!7.46e-19!119;CL:0000359!7.62e-17!32;CL:0000048!6.54e-11!430;CL:0002620!6.57e-11!23;CL:0002371!1.01e-10!591;CL:0000723!1.03e-09!436;CL:0000034!3.40e-09!444;CL:0000144!1.22e-08!625;CL:0002494!2.15e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.63e-16;32!CL:0000192;6.72e-15;43!CL:0000187;6.01e-13;55!CL:0002620;3.17e-11;23!CL:0000393;5.08e-11;61!CL:0000211;5.08e-11;61!CL:0000134;7.63e-11;55!CL:0000057;1.74e-10;73!CL:0000723;4.91e-10;61!CL:0000048;1.04e-09;58!CL:0002320;4.37e-09;188!CL:0002494;1.34e-07;16!CL:0000034;1.44e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.12e-26,76;CL:0000680,8.15e-25,58;CL:0000056,8.15e-25,58;CL:0000355,8.15e-25,58;CL:0000187,2.46e-23,55;CL:0000393,2.00e-21,61;CL:0000211,2.00e-21,61;CL:0000192,1.04e-20,43;CL:0000514,1.04e-20,43;CL:0000222,5.73e-19,121;CL:0000359,2.36e-17,32;CL:0000048,4.01e-13,427;CL:0000723,6.96e-12,433;CL:0000034,2.65e-11,441;CL:0002620,3.21e-11,23;CL:0002494,1.37e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;6.72e-15;43!CL:0000355;2.91e-13;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.96e-28!83;UBERON:0002329!7.96e-28!83;UBERON:0003077!7.96e-28!83;UBERON:0003059!7.96e-28!83;UBERON:0007282!7.96e-28!83;UBERON:0009618!7.96e-28!83;UBERON:0007285!7.96e-28!83;UBERON:0004290!1.03e-26!70;UBERON:0002049!3.15e-25!79;UBERON:0007798!3.15e-25!79;UBERON:0004872!7.89e-25!84;UBERON:0001134!3.12e-23!61;UBERON:0002036!3.12e-23!61;UBERON:0003082!3.12e-23!61;UBERON:0002385!1.11e-22!63;UBERON:0001015!1.11e-22!63;UBERON:0000383!1.11e-22!63;UBERON:0000055!2.80e-22!69;UBERON:0004535!4.99e-22!110;UBERON:0001009!5.91e-22!113;UBERON:0000486!1.40e-21!82;UBERON:0001981!2.05e-21!60;UBERON:0007500!2.05e-21!60;UBERON:0004537!2.05e-21!60;UBERON:0006965!2.05e-21!60;UBERON:0005256!1.17e-19!143;UBERON:0001637!2.31e-19!42;UBERON:0003509!2.31e-19!42;UBERON:0004572!2.31e-19!42;UBERON:0003914!1.73e-18!118;UBERON:0004573!8.54e-16!33;UBERON:0004571!8.54e-16!33;UBERON:0000490!1.90e-14!138;UBERON:0000119!5.28e-12!312;UBERON:0000483!1.62e-11!309;UBERON:0000475!4.20e-11!365;UBERON:0002100!5.17e-11!216;UBERON:0000468!5.97e-10!659;UBERON:0002199!2.45e-09!45;UBERON:0002416!2.45e-09!45;UBERON:0000477!2.55e-09!286;UBERON:0000947!7.24e-09!21;UBERON:0010191!7.24e-09!21;UBERON:0001013!2.32e-08!14;UBERON:0004111!4.98e-08!241;UBERON:0000948!6.79e-08!24;UBERON:0005498!6.79e-08!24;UBERON:0004140!6.79e-08!24;UBERON:0009881!6.79e-08!24;UBERON:0004141!6.79e-08!24;UBERON:0003084!6.79e-08!24;UBERON:0007005!6.79e-08!24;UBERON:0004139!6.79e-08!24;UBERON:0004291!6.79e-08!24;UBERON:0003102!9.99e-08!95;UBERON:0000025!1.19e-07!194;UBERON:0007100!1.25e-07!27;UBERON:0002097!1.97e-07!40;UBERON:0000481!4.10e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.72e-15;33!UBERON:0004571;8.72e-15;33!UBERON:0001637;1.48e-14;42!UBERON:0003509;1.48e-14;42!UBERON:0004572;1.48e-14;42!UBERON:0007500;7.63e-12;56!UBERON:0001981;7.63e-12;56!UBERON:0004537;7.63e-12;56!UBERON:0000055;1.46e-10;65!UBERON:0002049;2.70e-10;75!UBERON:0007798;2.70e-10;75!UBERON:0003914;2.82e-09;74!UBERON:0000947;3.88e-09;21!UBERON:0010191;3.88e-09;21!UBERON:0002384;4.55e-09;198!UBERON:0001013;1.38e-08;14!UBERON:0002385;2.03e-08;31!UBERON:0001015;2.03e-08;31!UBERON:0000383;2.03e-08;31!UBERON:0000948;2.66e-07;22!UBERON:0002204;2.95e-07;70!UBERON:0007100;4.79e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.03e-28,78;UBERON:0002329,7.93e-28,71;UBERON:0003059,7.93e-28,71;UBERON:0007282,7.93e-28,71;UBERON:0004290,7.93e-28,71;UBERON:0009618,7.93e-28,71;UBERON:0007524,1.50e-27,73;UBERON:0003077,2.53e-27,72;UBERON:0007285,2.53e-27,72;UBERON:0002049,1.44e-25,78;UBERON:0007798,1.44e-25,78;UBERON:0004872,2.85e-25,83;UBERON:0001134,3.20e-24,62;UBERON:0002036,3.20e-24,62;UBERON:0003082,3.20e-24,62;UBERON:0002385,1.18e-23,64;UBERON:0001015,1.18e-23,64;UBERON:0000383,1.18e-23,64;UBERON:0000055,1.57e-22,68;UBERON:0000486,2.90e-22,83;UBERON:0007500,1.23e-21,59;UBERON:0001981,1.23e-21,59;UBERON:0004537,1.23e-21,59;UBERON:0006965,1.23e-21,59;UBERON:0004535,2.25e-21,109;UBERON:0001009,2.59e-21,112;UBERON:0001637,5.88e-20,42;UBERON:0003509,5.88e-20,42;UBERON:0004572,5.88e-20,42;UBERON:0003914,1.08e-19,117;UBERON:0005256,3.05e-19,122;UBERON:0003104,4.18e-19,160;UBERON:0009142,4.18e-19,160;UBERON:0000490,9.41e-19,148;UBERON:0004573,2.87e-16,33;UBERON:0004571,2.87e-16,33;UBERON:0000926,1.13e-14,315;UBERON:0004120,1.13e-14,315;UBERON:0006603,1.13e-14,315;UBERON:0000119,2.27e-13,309;UBERON:0000483,7.59e-13,306;UBERON:0002100,2.05e-10,199;UBERON:0002199,3.11e-10,46;UBERON:0002416,3.11e-10,46;UBERON:0000479,8.10e-10,773;UBERON:0000947,4.13e-09,21;UBERON:0010191,4.13e-09,21;UBERON:0001013,1.38e-08,14;UBERON:0004111,2.05e-08,240;UBERON:0002097,3.13e-08,41;UBERON:0000025,3.62e-08,192;UBERON:0000948,4.17e-08,24;UBERON:0005498,4.17e-08,24;UBERON:0004140,4.17e-08,24;UBERON:0009881,4.17e-08,24;UBERON:0004141,4.17e-08,24;UBERON:0003084,4.17e-08,24;UBERON:0007005,4.17e-08,24;UBERON:0004139,4.17e-08,24;UBERON:0004291,4.17e-08,24;UBERON:0007100,7.85e-08,27;UBERON:0003102,1.59e-07,99 | |||
|phase1_expression=179.49823871931,146.872959389214,124.603693220839,259.189842734608,117.550767834377,314.041868676133,319.157846492071,238.158392281915,131.115185356319,34.4027511102112,26.5164443829522,47.1833363801172,49.8519588851777,101.117110368358,105.715762857205,146.566881926487,138.017046917491,146.792328167862,128.326326081903,51.3414812180206,77.7242633640604,64.258217903008,12.5943834337665,9.58120975510189,36.1562802033032,0.0764134057479513,0,0,0,0.383829398097213,0.309632246632152,0,1.204823675113,0.369754010166788,0,0,0,2.21598163412751,0,0,0.895661896959697,0.647787332037959,0.515151135268373,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0.570025487482497,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.786021525498329,0.616804496998528,0.167186495390678,1.62961133316795,1.4203434172042,0,0,0,0,0.541607727530031,0.25618263945135,0.260118695119756,0.328875809207352,0.276350017785848,0,2.37258501059297,0.802622484269139,2.09071047609954,0.113309342697566,1.53288197440768,0,0.253019692019503,0,0,0,0.752875595388864,0.76791966692651,1.24930726552346,0.710331756132051,0,0.201606743224732,0,0.579297615531196,209.673905030007,99.9344280958418,122.875921931633,145.65997841098,198.529812611812,164.545645539496,265.625506315067,366.436057337885,18.6233589813214,43.9024206975877,30.4786706355147,9.36500389808645,0.728590576585084,0,1.29818957461873,0.348259474598534,0.531831842075461,0,0,0.371457501329565,106.536650348554,173.767388211437,163.850316758785,147.545372842167,179.96525813405,92.7147801338027,104.288488301868,19.8980904560383,11.7402866686614,24.7693253445856,6.8480983908555,34.2122447573331,13.4234131651493,5.14728312484216,221.978893719602,44.5605644137558,56.3568725291686,50.675166217495,67.4593204849886,114.861144807744,112.30266902934,0,0,0.436094052142534,174.934126996752,163.606621070637,178.355166555406,750.938273120394,160.664777135856,112.135520028461,267.93997928156,161.813911761657,51.0386098055617,85.8106981083913,65.0578374391566,222.949490920984,179.76688843776,94.6658584608538,202.279729786048,225.906841331602,159.760639509875,81.7344110560604,80.2889804065932,86.7985985419896,132.904365486936,91.3887320799554,126.88405928384,203.148488595231,215.86402926018,310.365024420867,536.089133794914,90.9015015351957,74.6957563635626,110.548582078189,201.051750363424,235.689114969446,260.362556085132,111.050107313661,342.275424894349,284.244884517513,179.930184084468,546.465885969697,202.086009836579,314.836739935759,268.566623686484,377.046326226989,246.418186052671,269.851704666958,139.547646341726,156.796675114248,557.365060251085,180.245503729248,156.673987294891,0,1.63647672354501,0.286804595389004,5.3668430697022,3.18071443971565,10.1088730296481,11.0917328866446,5.55105871926382,0,270.657690930582,271.447675917398,185.100794612324,158.349463458905,348.66778964641,0,0,0.482022059766964,0.220587945464788,0.217879444092406,0.71181185733329,0.134831308160164,0,0,16.2394200017423,255.240028322271,151.870810181287,317.538816592771,1.26755034821831,0,14.7697476670351,0,0,48.0389868835872,0,0,0.201057944823262,2.22212268380471,50.8260956284107,202.787283129518,27.4229549848019,16.9258391263612,184.096832561768,16.0246757014792,15.2785219150282,16.7423653966446,0,0,0.492434012174795,1.17002132569619,1.33768046059855,2.81201501960331,1.84780341018745,1.41775097242386,0.0895585227028483,0,1.91691339582606,1.47798971368783,1.14462964217194,9.95174954595706,14.7002352485301,6.81709140502452,9.46118624953319,3.81988425558278,3.51652341630141,35.9252136647681,15.2184689200919,20.1229848755425,4.0015700568281,82.5284780781855,76.293012045824,59.2573349433276,215.366678452458,1827.62443830312,246.828403746352,118.076523763683,113.368106233389,260.293862753288,174.474432388632,243.243449441699,127.536370343068,572.465793687972,321.0637313445,214.008673080984,186.936165038579,307.27732669817,0.602878754119172,0.871533458600294,1.09970290300263,0,0,0,220.454867052256,133.239845567572,75.5975596715807,302.592930935241,181.641069134539,179.777207092855,0,0.197030760201927,0.215627574859517,0.385029108839245,2.03275699377971,2.60279707715243,6.18631050222156,4.85797169469611,6.37938751653163,0,0,0,73.2468205563265,121.541436617502,103.351974029599,51.3688027981094,93.6752191185099,51.7263921311306,5.03708084468667,339.768146592595,354.755706327336,109.681455570055,170.041753225072,301.074852228601,98.7866696502102,232.415973908273,209.317488524622,0,0.215714200818617,0.213455115606889,12.4282304292966,39.9445054825193,42.0322507728256,172.683034241869,223.594095080707,252.313424895333,143.131429718618,145.324858734944,140.264619237226,371.045166112477,141.564498910838,295.995396096983,94.4462294158805,84.6384719569302,134.571618256633,0,0.200506470303285,0,40.8739435466,68.830461506539,110.275632980876,16.2431860646668,11.321254554349,35.2957396129585,8.76835347919564,5.69978796021529,69.3773642832469,45.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| |||
|short_description=p1@RCN3 | |||
}} |
Latest revision as of 08:03, 19 September 2015
Short description: | p1@RCN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RCN3_5end |
Coexpression cluster: | C750_Smooth_Mesenchymal_Fibroblast_Hepatic_Chondrocyte_Lens_tenocyte |
Association with transcript: | 377bp_to_ENST00000270645, NM_020650, uc002poj.2_5end |
EntrezGene: | RCN3 |
HGNC: | 21145 |
UniProt: | Q96D15 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.12e-26 | 76 |
muscle precursor cell | 8.15e-25 | 58 |
myoblast | 8.15e-25 | 58 |
multi-potent skeletal muscle stem cell | 8.15e-25 | 58 |
muscle cell | 2.46e-23 | 55 |
electrically responsive cell | 2.00e-21 | 61 |
electrically active cell | 2.00e-21 | 61 |
smooth muscle cell | 1.04e-20 | 43 |
smooth muscle myoblast | 1.04e-20 | 43 |
mesodermal cell | 5.73e-19 | 121 |
vascular associated smooth muscle cell | 2.36e-17 | 32 |
multi fate stem cell | 4.01e-13 | 427 |
somatic stem cell | 6.96e-12 | 433 |
stem cell | 2.65e-11 | 441 |
skin fibroblast | 3.21e-11 | 23 |
cardiocyte | 1.37e-07 | 16 |