FFCP PHASE1:Hg19::chr9:118916164..118916178,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:118916164..118916178,+
|short_description=p5@PAPPA
|description=CAGE_peak_5_at_PAPPA_5end
|association_with_transcript=81bp_to_ENST00000328252_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5069 | |EntrezGene=5069 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8602 | |HGNC=8602 | ||
|TSSclassifier=strong | |||
|UniProt=Q13219 | |UniProt=Q13219 | ||
|association_with_transcript=81bp_to_ENST00000328252_5end | |||
|cluster_id=chr9:118916164..118916178,+ | |||
|coexpression_cluster_id=C2937 | |||
|description=CAGE_peak_5_at_PAPPA_5end | |||
|id=chr9:118916164..118916178,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.83e-30!180;CL:0000192!1.59e-27!42;CL:0000514!1.59e-27!42;CL:0000187!2.11e-27!54;CL:0000680!2.85e-27!57;CL:0000056!2.85e-27!57;CL:0000355!2.85e-27!57;CL:0000359!1.76e-25!32;CL:0000183!1.85e-24!59;CL:0000393!9.42e-23!60;CL:0000211!9.42e-23!60;CL:0000057!1.31e-13!75;CL:0002494!4.21e-11!16;CL:0002539!4.56e-10!10;CL:0000222!1.24e-09!119;CL:0000048!6.77e-09!430;CL:0000723!3.01e-08!436;CL:0000034!1.97e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.04e-35;32!CL:0000192;1.52e-25;43!CL:0002539;7.89e-13;10!CL:0000187;8.94e-13;55!CL:0002494;2.76e-12;16!CL:0000393;4.83e-10;61!CL:0000211;4.83e-10;61!CL:0002548;6.33e-09;6!CL:0002595;5.96e-08;5!CL:0000349;4.44e-07;19!CL:0002594;4.68e-07;4!CL:1000306;5.77e-07;4!CL:0002547;5.77e-07;4!CL:0000134;6.33e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.76e-38,32;CL:0000192,2.60e-35,43;CL:0000514,2.60e-35,43;CL:0000187,5.00e-25,55;CL:0000680,3.87e-23,58;CL:0000056,3.87e-23,58;CL:0000355,3.87e-23,58;CL:0000393,1.92e-21,61;CL:0000211,1.92e-21,61;CL:0002539,7.55e-13,10;CL:0002494,2.76e-12,16;CL:0000048,2.13e-11,427;CL:0000057,2.18e-11,76;CL:0000723,6.96e-11,433;CL:0000034,3.17e-10,441;CL:0000222,1.02e-09,121;CL:0002548,6.07e-09,6;CL:0002595,7.73e-08,5;CL:0000349,3.85e-07,19;CL:0002594,4.53e-07,4;CL:1000306,8.01e-07,4;CL:0002547,8.01e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;1.52e-25;43!CL:0000355;1.48e-11;58 | |||
|ontology_enrichment_disease=DOID:2394!8.44e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.68e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.51e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!3.45e-24!61;UBERON:0002036!3.45e-24!61;UBERON:0003082!3.45e-24!61;UBERON:0002385!8.33e-23!63;UBERON:0001015!8.33e-23!63;UBERON:0000383!8.33e-23!63;UBERON:0004290!5.61e-22!70;UBERON:0000914!9.17e-22!83;UBERON:0002329!9.17e-22!83;UBERON:0003077!9.17e-22!83;UBERON:0003059!9.17e-22!83;UBERON:0007282!9.17e-22!83;UBERON:0009618!9.17e-22!83;UBERON:0007285!9.17e-22!83;UBERON:0001637!2.76e-19!42;UBERON:0003509!2.76e-19!42;UBERON:0004572!2.76e-19!42;UBERON:0000486!4.50e-19!82;UBERON:0004872!3.70e-18!84;UBERON:0004573!3.37e-17!33;UBERON:0004571!3.37e-17!33;UBERON:0002049!1.40e-14!79;UBERON:0007798!1.40e-14!79;UBERON:0001981!2.91e-14!60;UBERON:0007500!2.91e-14!60;UBERON:0004537!2.91e-14!60;UBERON:0006965!2.91e-14!60;UBERON:0004535!7.03e-14!110;UBERON:0001009!5.54e-13!113;UBERON:0005256!7.56e-11!143;UBERON:0000055!1.34e-10!69;UBERON:0000948!3.10e-10!24;UBERON:0005498!3.10e-10!24;UBERON:0004140!3.10e-10!24;UBERON:0009881!3.10e-10!24;UBERON:0004141!3.10e-10!24;UBERON:0003084!3.10e-10!24;UBERON:0007005!3.10e-10!24;UBERON:0004139!3.10e-10!24;UBERON:0004291!3.10e-10!24;UBERON:0004237!4.56e-10!10;UBERON:0004695!4.56e-10!10;UBERON:0002111!4.56e-10!10;UBERON:0004178!4.56e-10!10;UBERON:0003914!7.29e-10!118;UBERON:0001135!2.17e-09!15;UBERON:0002100!4.74e-09!216;UBERON:0007100!2.33e-08!27;UBERON:0000490!4.75e-08!138;UBERON:0000478!5.87e-08!24;UBERON:0000947!5.92e-08!21;UBERON:0010191!5.92e-08!21;UBERON:0005631!1.56e-07!14;UBERON:0000158!1.56e-07!14;UBERON:0003104!5.68e-07!238;UBERON:0009142!5.68e-07!238;UBERON:0000481!6.57e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.05e-22;33!UBERON:0004571;1.05e-22;33!UBERON:0001637;1.91e-20;42!UBERON:0003509;1.91e-20;42!UBERON:0004572;1.91e-20;42!UBERON:0004237;7.89e-13;10!UBERON:0004695;7.89e-13;10!UBERON:0002111;7.89e-13;10!UBERON:0004178;7.89e-13;10!UBERON:0007500;7.79e-12;56!UBERON:0001981;7.79e-12;56!UBERON:0004537;7.79e-12;56!UBERON:0001135;3.09e-11;15!UBERON:0000947;8.94e-11;21!UBERON:0010191;8.94e-11;21!UBERON:0000948;1.36e-09;22!UBERON:0002049;3.65e-09;75!UBERON:0007798;3.65e-09;75!UBERON:0005631;6.63e-09;10!UBERON:0000158;6.63e-09;10!UBERON:0000055;2.44e-08;65!UBERON:0007100;5.08e-08;25!UBERON:0003834;5.96e-08;5!UBERON:0001533;5.96e-08;5!UBERON:0000478;1.42e-07;24!UBERON:0001310;4.68e-07;4!UBERON:0004797;5.77e-07;4!UBERON:0000415;5.77e-07;4!UBERON:0007240;5.77e-07;4!UBERON:0005742;5.77e-07;4!UBERON:0005734;5.77e-07;4!UBERON:0004664;5.77e-07;4!UBERON:0004663;5.77e-07;4!UBERON:0003914;8.11e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.54e-29,42;UBERON:0003509,1.54e-29,42;UBERON:0004572,1.54e-29,42;UBERON:0004573,3.12e-25,33;UBERON:0004571,3.12e-25,33;UBERON:0004872,4.50e-25,83;UBERON:0002049,1.91e-22,78;UBERON:0007798,1.91e-22,78;UBERON:0007500,4.33e-22,59;UBERON:0001981,4.33e-22,59;UBERON:0004537,4.33e-22,59;UBERON:0006965,4.33e-22,59;UBERON:0004535,6.51e-22,109;UBERON:0001134,6.46e-21,62;UBERON:0002036,6.46e-21,62;UBERON:0003082,6.46e-21,62;UBERON:0001009,6.57e-21,112;UBERON:0002385,6.50e-20,64;UBERON:0001015,6.50e-20,64;UBERON:0000383,6.50e-20,64;UBERON:0002329,3.13e-18,71;UBERON:0003059,3.13e-18,71;UBERON:0007282,3.13e-18,71;UBERON:0004290,3.13e-18,71;UBERON:0009618,3.13e-18,71;UBERON:0003077,8.03e-18,72;UBERON:0007285,8.03e-18,72;UBERON:0000055,1.04e-17,68;UBERON:0007524,2.00e-17,73;UBERON:0007503,1.33e-15,78;UBERON:0000486,6.22e-15,83;UBERON:0003914,1.57e-14,117;UBERON:0004237,7.55e-13,10;UBERON:0004695,7.55e-13,10;UBERON:0002111,7.55e-13,10;UBERON:0004178,7.55e-13,10;UBERON:0000948,1.97e-11,24;UBERON:0005498,1.97e-11,24;UBERON:0004140,1.97e-11,24;UBERON:0009881,1.97e-11,24;UBERON:0004141,1.97e-11,24;UBERON:0003084,1.97e-11,24;UBERON:0007005,1.97e-11,24;UBERON:0004139,1.97e-11,24;UBERON:0004291,1.97e-11,24;UBERON:0001135,2.89e-11,15;UBERON:0000947,1.05e-10,21;UBERON:0010191,1.05e-10,21;UBERON:0007100,1.09e-09,27;UBERON:0003498,2.91e-08,5;UBERON:0005985,2.91e-08,5;UBERON:0003834,7.73e-08,5;UBERON:0001533,7.73e-08,5;UBERON:0005631,9.55e-08,14;UBERON:0000158,9.55e-08,14;UBERON:0005256,1.18e-07,122;UBERON:0000478,1.29e-07,24;UBERON:0000926,3.03e-07,315;UBERON:0004120,3.03e-07,315;UBERON:0006603,3.03e-07,315;UBERON:0003104,3.29e-07,160;UBERON:0009142,3.29e-07,160;UBERON:0001310,4.53e-07,4;UBERON:0000415,8.01e-07,4;UBERON:0007240,8.01e-07,4;UBERON:0005742,8.01e-07,4;UBERON:0005734,8.01e-07,4;UBERON:0004664,8.01e-07,4;UBERON:0004663,8.01e-07,4 | |||
|phase1_expression=1.45342703416445,1.07050261945492,0.563817616383885,2.00146596706261,1.34088328328186,0,0,0,0,0,0,2.83973783769224,2.63766978228454,0.123766352960047,2.65117900582333,12.101852636132,7.8350288643117,10.2243412654232,8.78279037822912,0,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.722878304769133,15.0401373190767,2.75208386025565,0,1.45990461090791,0.567208902984407,1.77383517970051,2.54720878510066,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,4.05217637326655,36.5449339044484,12.0471380714502,1.06400514659507,3.36406560085384,11.7423895302675,9.8667019366864,1.55605517699883,4.31074150623002,1.30769522490767,3.02714855289863,3.45705554687999,0,0.936480230490962,0,0,0,0,0,0,0,0.206651562351531,2.37600571456411,2.71993622206413,0,0,0,0,0,0,0.919463387397059,1.80285670687916,2.49550802952046,1.25572744982203,1.2813443329114,0.211931901159562,0.600182192168805,1.23663035086127,0,0,2.36286865137773,0.974370051611986,1.51460264546469,0.736399189138395,0.646584227275248,1.42003837006646,0,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0,7.8224766164908,0.643240938192885,0,1.39310378409594,2.16563844500876,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,3.43135620597051,0,0,0,0,0.325808305310325,1.03993478527958,0,0.115930404975077,20.8987475739763,0,0,0,0,0,0,0,0,0,0.335964256397719,1.13420077793909,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,1.80980402060889,0,0,1.59562869950922,1.04007436911366,0,0,0,0.285955987316295,0,0.823240336780769,0,0,0.791951872933429,4.82303003295338,2.61460037580088,2.7992437530976,0,0,0,1.4377491329495,1.14861935834114,0,0.434343920002738,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,1.10422342547226,0,0,5.19927153827018,9.27830741745241,7.88512075169673,3.5142424497814,0.300946099727719,2.27407504055985,0,0,0.553107505625109,0.521301686808497,0.195801157462741,0,0,0,0,0.303127571446259,0,0.30239029332968,2.97729369382532,8.5938705041315,2.52594084989766,5.89440086576224,0,1.93024705372329,0,0.308419387605311,0.710246901252508,0.821271560138091,2.07701771673448,2.90525946149898,0,0,0,2.29628896329214,0.728364672026868,0.524497659837696,0,0,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,24.5237607721579,0,0,0.574265537996172,0,0,0.193341436584244,0,0.307007349452259,0.689182862422653,0.429680979473094,0.580066775656914,0.340906509664404,0.0890320356467374,0,0,0,0,0.929691098594572,54.1477236548701,6.2733354314454,3.38836938193698,6.38767236380426,3.47973196830029,7.04232032594896,14.7418633344251,0,1.89827654831236,2.47819252100972,1.02359116524534,0.42793898803392,3.5002357271853,4.70969184119538,0.539617372749944,1.64722217841633,2.23843564456804,5.66110948405285,11.0957224821106,15.1653044246033,0,2.43713489631284,1.05650146756755,0.9554993798559,1.97967604735198,2.26016233240486,8.27048015319186,11.941901554342,5.69986150829892,1.73632660280006,0.655894752046633,10.7542499790233,3.40805847909725,2.53526042279017,1.14729081763241,1.3754865741837,13.5534999562875,0,1.26664581178598,0.329294892959902,0.379473173765715,0,0,0,0,22.594512186427,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53614521001611,0.296964680832639,0,0,0,0.111308705022906,0,0,0.19924798825107,0.828851746593443,0,0,0,2.17727711363265,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,11.1650405906172,16.8539571859427,20.7883562647268,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884612114798832,0,0,0,0.661983911750998,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,8.56084428907553,0.225980740780532,0.685209623233754,0,0,0,0.561111741760736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,4.30723814746088,0,0,0,0,5.40449825313605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0,0.179287339332845,0,0,0,5.5939078284045,0,7.77799342081141,0,1.19730191562487,0,1.02232813071253,0.339936274560377,0,0,0.258565912723101,0,0.171086837884329,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0.235265819698172,0,0,1.19403842309499,2.10341978862502,0.554805861502613,0,0.754703705257725,0,4.57680136793847,0.453692771289717,5.12942761923176,10.0541501992951,6.21257391938439,6.29724357029046,1.86315548251511,0.829412415681711,0.53168342911599,2.60872530905867,0.601030435988874,3.80805212168795,2.84809513243263,6.00100575368446,3.00749559718968,0.464033759878494,1.59238355479446,0,1.71697852591396,1.01024846629776,0,0,0,0,0,0.463044948647668,0,9.3126197362373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| ||
|short_description=p5@PAPPA | |||
}} | }} |
Latest revision as of 17:50, 24 September 2015
Short description: | p5@PAPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PAPPA_5end |
Coexpression cluster: | C2937_placenta_Smooth_Fibroblast_chorionic_Lens_Aortic_Chondrocyte |
Association with transcript: | 81bp_to_ENST00000328252_5end |
EntrezGene: | PAPPA |
HGNC: | 8602 |
UniProt: | Q13219 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.76e-38 | 32 |
smooth muscle cell | 2.60e-35 | 43 |
smooth muscle myoblast | 2.60e-35 | 43 |
muscle cell | 5.00e-25 | 55 |
muscle precursor cell | 3.87e-23 | 58 |
myoblast | 3.87e-23 | 58 |
multi-potent skeletal muscle stem cell | 3.87e-23 | 58 |
electrically responsive cell | 1.92e-21 | 61 |
electrically active cell | 1.92e-21 | 61 |
aortic smooth muscle cell | 7.55e-13 | 10 |
cardiocyte | 2.76e-12 | 16 |
multi fate stem cell | 2.13e-11 | 427 |
fibroblast | 2.18e-11 | 76 |
somatic stem cell | 6.96e-11 | 433 |
stem cell | 3.17e-10 | 441 |
mesodermal cell | 1.02e-09 | 121 |
cardiac fibroblast | 6.07e-09 | 6 |
smooth muscle cell of the subclavian artery | 7.73e-08 | 5 |
extraembryonic cell | 3.85e-07 | 19 |
smooth muscle cell of the umbilical artery | 4.53e-07 | 4 |
fibroblast of tunica adventitia of artery | 8.01e-07 | 4 |
fibroblast of the aortic adventitia | 8.01e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.51e-07 | 14 |