FFCP PHASE1:Hg19::chr22:44420149..44420193,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14653 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HBI1,B0QYP6 | |||
|association_with_transcript=0bp_to_ENST00000338758,ENST00000402876,NM_013327,uc003ben.2_5end | |||
|cluster_id=chr22:44420149..44420193,+ | |||
|description=CAGE_peak_1_at_PARVB_5end | |||
|id=chr22:44420149..44420193,+ | |||
|ontology_enrichment_celltype=CL:0002371!5.03e-28!591;CL:0000144!3.32e-23!625;CL:0000048!5.11e-23!430;CL:0000723!1.07e-21!436;CL:0000034!4.41e-21!444;CL:0000115!5.42e-19!35;CL:0000763!1.16e-17!112;CL:0000049!1.16e-17!112;CL:0000222!7.82e-16!119;CL:0000012!1.18e-15!682;CL:0000557!2.01e-15!71;CL:0000839!3.41e-15!70;CL:0002320!3.43e-15!365;CL:0002078!3.59e-15!44;CL:0002139!4.30e-15!24;CL:0000134!5.08e-15!358;CL:0000548!1.20e-14!679;CL:0000004!1.20e-14!679;CL:0000255!1.20e-14!679;CL:0002009!5.69e-13!65;CL:0000219!9.13e-13!390;CL:0002194!1.17e-12!63;CL:0000576!1.17e-12!63;CL:0000040!1.17e-12!63;CL:0000559!1.17e-12!63;CL:0000988!1.17e-12!182;CL:0000071!2.20e-12!18;CL:0002546!2.20e-12!18;CL:0000037!2.81e-11!172;CL:0000566!2.81e-11!172;CL:0002032!5.20e-11!165;CL:0000837!5.20e-11!165;CL:0000766!9.52e-11!76;CL:0002057!1.30e-10!42;CL:0000063!2.66e-10!578;CL:0000213!1.84e-09!57;CL:0000215!1.84e-09!57;CL:0000860!2.10e-09!45;CL:0000183!5.63e-09!59;CL:0002031!9.40e-08!124;CL:0000680!1.38e-07!57;CL:0000056!1.38e-07!57;CL:0000355!1.38e-07!57;CL:0000003!1.88e-07!722;CL:0000187!2.50e-07!54;CL:1000413!4.10e-07!9;CL:0000055!4.87e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.44e-16;36!CL:0002139;4.19e-15;24!CL:0000071;2.16e-12;18!CL:0002078;1.58e-10;45!CL:0000473;3.21e-09;39!CL:0000234;3.21e-09;39!CL:0000860;3.58e-08;33!CL:0002057;3.58e-08;33!CL:0000576;2.33e-07;48!CL:1000413;4.02e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.26e-23,427;CL:0000723,7.31e-22,433;CL:0000034,3.05e-21,441;CL:0000115,1.16e-19,36;CL:0000763,1.27e-18,108;CL:0000049,1.27e-18,108;CL:0000557,1.07e-16,67;CL:0000222,1.67e-16,121;CL:0000839,1.82e-16,66;CL:0002078,8.71e-16,45;CL:0002320,3.28e-15,361;CL:0002139,4.28e-15,24;CL:0000134,4.82e-15,354;CL:0002009,3.75e-14,61;CL:0002194,7.57e-14,59;CL:0000576,7.57e-14,59;CL:0000040,7.57e-14,59;CL:0000559,7.57e-14,59;CL:0000473,1.66e-13,48;CL:0000234,1.66e-13,48;CL:0000988,8.62e-13,177;CL:0000219,8.96e-13,386;CL:0000071,2.19e-12,18;CL:0002546,2.19e-12,18;CL:0000037,8.67e-12,168;CL:0000766,1.28e-11,72;CL:0002032,1.61e-11,161;CL:0000837,1.61e-11,161;CL:0000860,1.29e-10,42;CL:0002057,1.29e-10,42;CL:0000213,5.96e-10,58;CL:0000215,5.96e-10,58;CL:0002031,3.12e-08,120;CL:0000680,9.63e-08,58;CL:0000056,9.63e-08,58;CL:0000355,9.63e-08,58;CL:0000187,1.74e-07,55;CL:1000413,4.10e-07,9;CL:0000738,4.25e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002546;2.16e-12;18!CL:0002057;4.56e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.02e-26!216;UBERON:0002204!1.70e-21!167;UBERON:0000055!2.17e-18!69;UBERON:0002049!1.28e-16!79;UBERON:0007798!1.28e-16!79;UBERON:0001009!1.93e-16!113;UBERON:0004535!2.56e-15!110;UBERON:0002371!2.57e-15!80;UBERON:0004872!2.58e-15!84;UBERON:0001981!1.68e-14!60;UBERON:0007500!1.68e-14!60;UBERON:0004537!1.68e-14!60;UBERON:0006965!1.68e-14!60;UBERON:0002384!4.01e-14!375;UBERON:0001474!3.56e-13!86;UBERON:0002193!5.79e-13!112;UBERON:0002405!5.93e-13!115;UBERON:0003914!7.02e-13!118;UBERON:0001986!2.20e-12!18;UBERON:0004638!2.20e-12!18;UBERON:0004852!2.20e-12!18;UBERON:0004765!2.54e-12!101;UBERON:0001434!2.54e-12!101;UBERON:0000926!3.19e-11!448;UBERON:0004120!3.19e-11!448;UBERON:0006603!3.19e-11!448;UBERON:0004290!1.34e-10!70;UBERON:0002390!3.65e-10!102;UBERON:0003061!3.65e-10!102;UBERON:0000914!4.73e-10!83;UBERON:0002329!4.73e-10!83;UBERON:0003077!4.73e-10!83;UBERON:0003059!4.73e-10!83;UBERON:0007282!4.73e-10!83;UBERON:0009618!4.73e-10!83;UBERON:0007285!4.73e-10!83;UBERON:0000487!1.67e-09!22;UBERON:0001134!4.47e-09!61;UBERON:0002036!4.47e-09!61;UBERON:0003082!4.47e-09!61;UBERON:0001637!1.30e-08!42;UBERON:0003509!1.30e-08!42;UBERON:0004572!1.30e-08!42;UBERON:0002385!1.36e-08!63;UBERON:0001015!1.36e-08!63;UBERON:0000383!1.36e-08!63;UBERON:0006914!3.17e-08!25;UBERON:0000486!6.41e-08!82;UBERON:0007100!2.24e-07!27;UBERON:0003915!4.10e-07!9;UBERON:0004700!4.10e-07!9;UBERON:0001917!4.10e-07!9;UBERON:0005256!6.92e-07!143;UBERON:0003103!9.10e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.16e-12;18!UBERON:0001986;2.16e-12;18!UBERON:0004852;2.16e-12;18!UBERON:0000487;1.64e-09;22!UBERON:0000055;4.88e-09;65!UBERON:0007500;1.79e-08;56!UBERON:0001981;1.79e-08;56!UBERON:0004537;1.79e-08;56!UBERON:0006914;3.08e-08;25!UBERON:0003914;3.85e-08;74!UBERON:0007100;2.91e-07;25!UBERON:0003915;4.02e-07;9!UBERON:0004700;4.02e-07;9!UBERON:0001917;4.02e-07;9 | |||
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| |||
|short_description=p1@PARVB | |||
}} |
Latest revision as of 02:01, 25 September 2015
Short description: | p1@PARVB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PARVB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000338758, ENST00000402876, NM_013327, uc003ben.2_5end |
EntrezGene: | PARVB |
HGNC: | 14653 |
UniProt: | Q9HBI1B0QYP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data