FFCP PHASE1:Mm9::chr11:109510690..109510751,+: Difference between revisions
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{{FFCP|EntrezGene=19084|HGNC=|MCL_coexpression_id=1903|UniProt=Q9DBC7|association_with_transcript=0bp_to_ENSMUST00000106677,ENSMUST00000123354_5end|description=CAGE_peak_4_at_Prkar1a_5end|id=chr11:109510690..109510751,+|ontology_enrichment_celltype=CL:0000055!1.43e-18!50;CL:0000393!3.56e-16!39;CL:0000211!3.56e-16!39;CL:0002319!2.29e-15!43;CL:0000221!9.64e-15!44;CL:0000133!9.64e-15!44;CL:0000540!7.14e-13!33;CL:0000047!7.14e-13!33;CL:0000031!7.14e-13!33;CL:0000404!7.14e-13!33;CL:0000117!3.93e-10!23;CL:0000337!3.93e-10!23;CL:0002321!4.68e-08!70;CL:0000220!4.68e-08!70|ontology_enrichment_celltype_v019_2=CL:0000393,8.55e-19,39;CL:0000211,8.55e-19,39;CL:0002319,4.68e-18,43;CL:0000221,2.86e-17,44;CL:0000133,2.86e-17,44;CL:0000540,1.10e-14,33;CL:0000047,1.10e-14,33;CL:0000031,1.10e-14,33;CL:0000404,1.10e-14,33;CL:0002321,1.18e-13,70;CL:0000117,1.10e-11,23;CL:0000337,1.10e-11,23;CL:0000723,6.28e-08,91;CL:0000048,6.28e-08,91;CL:0000034,9.59e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.04e-31!73;UBERON:0005743!9.04e-31!73;UBERON:0000073!7.03e-30!75;UBERON:0001016!7.03e-30!75;UBERON:0004121!1.92e-21!102;UBERON:0000924!1.92e-21!102;UBERON:0006601!1.92e-21!102;UBERON:0001049!8.66e-21!52;UBERON:0005068!8.66e-21!52;UBERON:0006241!8.66e-21!52;UBERON:0007135!8.66e-21!52;UBERON:0000955!3.72e-20!50;UBERON:0006238!3.72e-20!50;UBERON:0002616!1.81e-19!49;UBERON:0002346!2.76e-18!71;UBERON:0003075!2.76e-18!71;UBERON:0007284!2.76e-18!71;UBERON:0002020!8.15e-16!34;UBERON:0000033!3.33e-15!63;UBERON:0003080!1.07e-14!40;UBERON:0002780!4.80e-14!39;UBERON:0001890!4.80e-14!39;UBERON:0006240!4.80e-14!39;UBERON:0002791!1.81e-13!29;UBERON:0003528!1.81e-13!29;UBERON:0001893!1.81e-13!29;UBERON:0000025!5.75e-12!114;UBERON:0003056!9.02e-12!49;UBERON:0004111!1.67e-11!122;UBERON:0000956!1.73e-09!21;UBERON:0001869!1.73e-09!21;UBERON:0000203!1.73e-09!21;UBERON:0002619!1.93e-08!17;UBERON:0003076!6.66e-07!12;UBERON:0003057!6.66e-07!12;UBERON:0007811!6.81e-07!86;UBERON:0002021!9.59e-07!10;UBERON:0000411!9.59e-07!10;UBERON:0001950!9.59e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.26e-36,73;UBERON:0001016,2.95e-35,75;UBERON:0000073,1.16e-25,54;UBERON:0001049,3.82e-24,52;UBERON:0005068,3.82e-24,52;UBERON:0006241,3.82e-24,52;UBERON:0007135,3.82e-24,52;UBERON:0004121,3.89e-24,95;UBERON:0000924,3.89e-24,95;UBERON:0006601,3.89e-24,95;UBERON:0000955,5.46e-21,47;UBERON:0006238,5.46e-21,47;UBERON:0002346,9.60e-21,64;UBERON:0003075,9.60e-21,64;UBERON:0007284,9.60e-21,64;UBERON:0002616,3.70e-20,46;UBERON:0010314,4.02e-19,92;UBERON:0002020,8.16e-19,34;UBERON:0003080,1.44e-16,40;UBERON:0010371,3.49e-16,73;UBERON:0003528,7.36e-16,29;UBERON:0002791,7.36e-16,29;UBERON:0001893,7.36e-16,29;UBERON:0002780,9.07e-16,39;UBERON:0001890,9.07e-16,39;UBERON:0006240,9.07e-16,39;UBERON:0000025,3.00e-15,114;UBERON:0004111,2.69e-14,122;UBERON:0003056,1.81e-12,49;UBERON:0000956,7.21e-11,21;UBERON:0001869,7.21e-11,21;UBERON:0000203,7.21e-11,21;UBERON:0002619,1.58e-09,17;UBERON:0003076,2.56e-08,12;UBERON:0003057,2.56e-08,12;UBERON:0002021,4.04e-08,10;UBERON:0000411,4.04e-08,10;UBERON:0001950,4.04e-08,10|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0,0.129123323441576,0,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0.315462165358238,0.137114433605739,0.42438965179803,3.31668831589172,1.78723712161594,1.56719873483361,0.159992422793407,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,21.6542526917993,24.431840423903,14.1330999164495,7.82391344348039,1.30815093828268,4.39372365468944,4.86074747685709,13.9986421625363,8.62515386189829,0,0,0,4.3734104126111,4.29800159908135,10.3134418455488,4.45096213891115,5.28990979272033,5.07065122804943,13.2149367506962,17.7858959222228,8.54904731417329,6.92206453796882,4.9733608046227,8.38880309451533,4.99483796918021,2.17748185847803,2.56511282830212,1.47227472945967,7.42692559449889,5.96345060569357,1.71487118900936,2.39613677545591,0.919218786610021,16.5173821499083,11.1087984134113,12.7493422602682,5.40733779693795,7.41049913179518,5.73004707612436,15.6342479440773,15.757353080887,13.5990440521361,6.18720029494702,7.83044244395066,7.45597783301202,0.151452386666368,1.28471652181535,4.34796733052517,0.860423876981386,0,0,0,0,1.26399978118577,3.74946709671727,1.29893002301434,1.41335829804136,0.281686839553361,3.84979432242953,0,0,2.16491041011214,1.52015919285059,1.01104889002957,0.45673551887624,2.33044095282455,2.22663208597237,0.867426633830679,0.608930956624282,0.922461989024234,1.65794904607885,1.41106448562846,0.251333182659351,0,1.59059292611903,0.884610551949874,0,0.441683036920787,0,0,7.31951992528868,8.3778682725382,0.255457055208591,0.11981512450592,0.599902730993408,0.254140454146129,17.2259235315546,12.8100168789215,2.63874139437015,11.4724051326902,12.2743419518559,13.714010940931,14.6017136760982,0.305518091550949,0.248813941220186,0.252722758433675,1.47309299120532,0,0,0.180062129805349,0.60281927134286,0.68036499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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19084 | |||
|HGNC= | |||
|MCL_coexpression_id=1903 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DBC7 | |||
|association_with_transcript=0bp_to_ENSMUST00000106677,ENSMUST00000123354_5end | |||
|cluster_id=chr11:109510690..109510751,+ | |||
|description=CAGE_peak_4_at_Prkar1a_5end | |||
|id=chr11:109510690..109510751,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.43e-18!50;CL:0000393!3.56e-16!39;CL:0000211!3.56e-16!39;CL:0002319!2.29e-15!43;CL:0000221!9.64e-15!44;CL:0000133!9.64e-15!44;CL:0000540!7.14e-13!33;CL:0000047!7.14e-13!33;CL:0000031!7.14e-13!33;CL:0000404!7.14e-13!33;CL:0000117!3.93e-10!23;CL:0000337!3.93e-10!23;CL:0002321!4.68e-08!70;CL:0000220!4.68e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,8.55e-19,39;CL:0000211,8.55e-19,39;CL:0002319,4.68e-18,43;CL:0000221,2.86e-17,44;CL:0000133,2.86e-17,44;CL:0000540,1.10e-14,33;CL:0000047,1.10e-14,33;CL:0000031,1.10e-14,33;CL:0000404,1.10e-14,33;CL:0002321,1.18e-13,70;CL:0000117,1.10e-11,23;CL:0000337,1.10e-11,23;CL:0000723,6.28e-08,91;CL:0000048,6.28e-08,91;CL:0000034,9.59e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.04e-31!73;UBERON:0005743!9.04e-31!73;UBERON:0000073!7.03e-30!75;UBERON:0001016!7.03e-30!75;UBERON:0004121!1.92e-21!102;UBERON:0000924!1.92e-21!102;UBERON:0006601!1.92e-21!102;UBERON:0001049!8.66e-21!52;UBERON:0005068!8.66e-21!52;UBERON:0006241!8.66e-21!52;UBERON:0007135!8.66e-21!52;UBERON:0000955!3.72e-20!50;UBERON:0006238!3.72e-20!50;UBERON:0002616!1.81e-19!49;UBERON:0002346!2.76e-18!71;UBERON:0003075!2.76e-18!71;UBERON:0007284!2.76e-18!71;UBERON:0002020!8.15e-16!34;UBERON:0000033!3.33e-15!63;UBERON:0003080!1.07e-14!40;UBERON:0002780!4.80e-14!39;UBERON:0001890!4.80e-14!39;UBERON:0006240!4.80e-14!39;UBERON:0002791!1.81e-13!29;UBERON:0003528!1.81e-13!29;UBERON:0001893!1.81e-13!29;UBERON:0000025!5.75e-12!114;UBERON:0003056!9.02e-12!49;UBERON:0004111!1.67e-11!122;UBERON:0000956!1.73e-09!21;UBERON:0001869!1.73e-09!21;UBERON:0000203!1.73e-09!21;UBERON:0002619!1.93e-08!17;UBERON:0003076!6.66e-07!12;UBERON:0003057!6.66e-07!12;UBERON:0007811!6.81e-07!86;UBERON:0002021!9.59e-07!10;UBERON:0000411!9.59e-07!10;UBERON:0001950!9.59e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.26e-36,73;UBERON:0001016,2.95e-35,75;UBERON:0000073,1.16e-25,54;UBERON:0001049,3.82e-24,52;UBERON:0005068,3.82e-24,52;UBERON:0006241,3.82e-24,52;UBERON:0007135,3.82e-24,52;UBERON:0004121,3.89e-24,95;UBERON:0000924,3.89e-24,95;UBERON:0006601,3.89e-24,95;UBERON:0000955,5.46e-21,47;UBERON:0006238,5.46e-21,47;UBERON:0002346,9.60e-21,64;UBERON:0003075,9.60e-21,64;UBERON:0007284,9.60e-21,64;UBERON:0002616,3.70e-20,46;UBERON:0010314,4.02e-19,92;UBERON:0002020,8.16e-19,34;UBERON:0003080,1.44e-16,40;UBERON:0010371,3.49e-16,73;UBERON:0003528,7.36e-16,29;UBERON:0002791,7.36e-16,29;UBERON:0001893,7.36e-16,29;UBERON:0002780,9.07e-16,39;UBERON:0001890,9.07e-16,39;UBERON:0006240,9.07e-16,39;UBERON:0000025,3.00e-15,114;UBERON:0004111,2.69e-14,122;UBERON:0003056,1.81e-12,49;UBERON:0000956,7.21e-11,21;UBERON:0001869,7.21e-11,21;UBERON:0000203,7.21e-11,21;UBERON:0002619,1.58e-09,17;UBERON:0003076,2.56e-08,12;UBERON:0003057,2.56e-08,12;UBERON:0002021,4.04e-08,10;UBERON:0000411,4.04e-08,10;UBERON:0001950,4.04e-08,10 | |||
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| |||
|short_description=p4@Prkar1a | |||
}} |
Latest revision as of 21:42, 26 September 2015
Short description: | p4@Prkar1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Prkar1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1903 |
Association with transcript: | 0bp_to_ENSMUST00000106677, ENSMUST00000123354_5end |
EntrezGene: | Prkar1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 8.55e-19 | 39 |
electrically active cell | 8.55e-19 | 39 |
neural cell | 4.68e-18 | 43 |
ectodermal cell | 2.86e-17 | 44 |
neurectodermal cell | 2.86e-17 | 44 |
neuron | 1.10e-14 | 33 |
neuronal stem cell | 1.10e-14 | 33 |
neuroblast | 1.10e-14 | 33 |
electrically signaling cell | 1.10e-14 | 33 |
embryonic cell | 1.18e-13 | 70 |
CNS neuron (sensu Vertebrata) | 1.10e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.10e-11 | 23 |
somatic stem cell | 6.28e-08 | 91 |
multi fate stem cell | 6.28e-08 | 91 |
stem cell | 9.59e-07 | 97 |