FFCP PHASE1:Hg19::chr3:123752181..123752201,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8997 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4814 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-340bp_to_uc003ehd.2_5end | |||
|cluster_id=chr3:123752181..123752201,+ | |||
|coexpression_cluster_id=C4276 | |||
|description=CAGE_peak_5_at_KALRN_5end | |||
|id=chr3:123752181..123752201,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.01e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;5.30e-07;25!CL:0002138;9.17e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.21e-07,25;CL:0005020,5.38e-07,6;CL:0002138,5.38e-07,6;CL:0005022,5.38e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.24e-09;82!UBERON:0006238;5.43e-07;10!CL:0005022;9.17e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.75e-34!94;UBERON:0001016!2.75e-34!94;UBERON:0005743!3.12e-34!86;UBERON:0001017!2.21e-33!82;UBERON:0007023!3.11e-29!115;UBERON:0000955!1.22e-27!69;UBERON:0006238!1.22e-27!69;UBERON:0001049!5.44e-24!57;UBERON:0005068!5.44e-24!57;UBERON:0006241!5.44e-24!57;UBERON:0007135!5.44e-24!57;UBERON:0003075!1.12e-23!86;UBERON:0007284!1.12e-23!86;UBERON:0002616!7.32e-23!59;UBERON:0001869!4.28e-22!32;UBERON:0001893!6.68e-22!34;UBERON:0002780!8.40e-22!41;UBERON:0001890!8.40e-22!41;UBERON:0006240!8.40e-22!41;UBERON:0002346!9.20e-22!90;UBERON:0002020!1.64e-21!34;UBERON:0003528!1.64e-21!34;UBERON:0002791!3.78e-21!33;UBERON:0003080!8.30e-21!42;UBERON:0003056!2.36e-20!61;UBERON:0004121!6.73e-20!169;UBERON:0000033!4.24e-19!123;UBERON:0000924!7.66e-19!173;UBERON:0006601!7.66e-19!173;UBERON:0000153!1.32e-18!129;UBERON:0007811!1.32e-18!129;UBERON:0000956!1.12e-17!25;UBERON:0000203!1.12e-17!25;UBERON:0002619!2.01e-17!22;UBERON:0001950!2.20e-16!20;UBERON:0000468!1.70e-13!659;UBERON:0000467!1.31e-11!625;UBERON:0000480!1.92e-11!626;UBERON:0000475!5.59e-11!365;UBERON:0000119!8.66e-11!312;UBERON:0000483!8.71e-11!309;UBERON:0000477!2.25e-10!286;UBERON:0000025!2.95e-10!194;UBERON:0004111!7.32e-10!241;UBERON:0000922!1.53e-07!612;UBERON:0001871!7.05e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.40e-31;32!UBERON:0002791;1.62e-29;32!UBERON:0001893;3.71e-28;34!UBERON:0003528;3.97e-28;34!UBERON:0002020;3.97e-28;34!UBERON:0002619;9.85e-28;22!UBERON:0000956;1.84e-27;25!UBERON:0000203;1.84e-27;25!UBERON:0001950;3.42e-26;20!UBERON:0002780;4.83e-23;41!UBERON:0001890;4.83e-23;41!UBERON:0000955;1.39e-15;68!UBERON:0000073;1.66e-15;53!UBERON:0002616;1.66e-15;53!UBERON:0001017;1.49e-13;75!UBERON:0001016;2.35e-13;83!UBERON:0001871;3.24e-09;6!UBERON:0000200;1.37e-08;6!UBERON:0002420;2.26e-08;9!UBERON:0007245;2.26e-08;9!UBERON:0010009;2.26e-08;9!UBERON:0010011;2.26e-08;9!UBERON:0000454;2.26e-08;9!UBERON:0007023;4.33e-08;114!UBERON:0001872;5.45e-08;5!UBERON:0002021;1.61e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.54e-36,89;UBERON:0001017,7.51e-36,81;UBERON:0001869,1.02e-34,32;UBERON:0000955,7.61e-33,68;UBERON:0006238,7.61e-33,68;UBERON:0002791,4.44e-32,32;UBERON:0001893,5.10e-32,34;UBERON:0002780,8.05e-32,41;UBERON:0001890,8.05e-32,41;UBERON:0003080,8.05e-32,41;UBERON:0006240,8.05e-32,41;UBERON:0003528,1.47e-31,34;UBERON:0002020,1.47e-31,34;UBERON:0000073,3.70e-29,53;UBERON:0002616,3.70e-29,53;UBERON:0007023,3.89e-29,114;UBERON:0001049,2.23e-28,56;UBERON:0005068,2.23e-28,56;UBERON:0006241,2.23e-28,56;UBERON:0007135,2.23e-28,56;UBERON:0002619,6.16e-28,22;UBERON:0000956,2.36e-27,25;UBERON:0000203,2.36e-27,25;UBERON:0001950,3.35e-26,20;UBERON:0003075,7.91e-25,82;UBERON:0007284,7.91e-25,82;UBERON:0003056,1.15e-24,61;UBERON:0002346,6.83e-23,86;UBERON:0010371,6.72e-19,104;UBERON:0011216,1.20e-18,223;UBERON:0004121,1.54e-18,171;UBERON:0000924,1.54e-18,171;UBERON:0006601,1.54e-18,171;UBERON:0010314,1.19e-13,132;UBERON:0004111,1.04e-11,240;UBERON:0000025,4.23e-11,192;UBERON:0001871,3.29e-09,6;UBERON:0000200,1.22e-08,6;UBERON:0002420,2.34e-08,9;UBERON:0007245,2.34e-08,9;UBERON:0010009,2.34e-08,9;UBERON:0010011,2.34e-08,9;UBERON:0000454,2.34e-08,9;UBERON:0001872,5.63e-08,5;UBERON:0002021,1.53e-07,5 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.563817616383885,0,0.446961094427288,0,0,0,0.261185628199839,0,0.697801167972428,0.218441372130172,0,0.247532705920093,0,0,0,0.730310090387373,1.46379839637152,1.96993692922861,0.816002764977012,1.56727360739044,0.286235987131057,1.23186982565596,1.00434111675842,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,1.50401373190767,0.289693037921647,2.3858578411533,0.973269740605272,1.22895262313288,1.10864698731282,1.58102614247627,3.79839318943367,0,0,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,1.13061588384802,0.838998872419812,0,0.208994966536811,2.06733407335463,2.84613010149368,1.67360306382335,1.61131726843659,1.52054421143703,3.41686880567437,0.735326160691737,0,1.42879565254528,0.673588117878509,0.788280363383256,0,3.79706263827252,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0.74000264525148,0.311211035399766,0,0.326923806226917,0.756787138224657,0.576175924479999,0,0,0,0,0.469737994575059,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0.30648779579902,0.300476117813194,0,0.89694817844431,1.06778694409284,0.423863802319124,0.600182192168805,0.412210116953756,2.06112432036503,0.930584281657949,0.843881661206331,0.389748020644795,0.757301322732344,0.276149695926898,0,2.84007674013291,0.503760491138201,1.01736355386293,0.773043412653187,0.272746120590835,0,0.243947412259191,0.530119073285941,1.04574548582567,0.829288440122964,0.252320850875628,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,1.40241773803446,0.4115740113314,0,0,0,1.18157981336281,0,0,0.857839051492628,0.109750285408626,0,0,0,0,0,2.88662684050547,0.811512834825538,0.469634776943287,3.03169540298255,1.85194205030644,2.28304982681518,0,0,0,0,0,0,0.503946384596579,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0.25248486685276,0,0,0,1.71072446022705,0,0,0,0.672786506072164,0,0.1466765716419,0.129271715757778,0,0,1.32969058292435,0,0.257207374262142,0,0,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0,1.20575750823834,0.871533458600294,2.59929777073348,0,0,0,1.19812427745791,0,1.42636905040718,0.289562613335158,0.61642896765115,0.358121926479791,0,0,0,0,0.76228387266739,9.10978977003352,6.95959931499926,4.85797169469611,4.46557126157214,0,0,0,0.24538298343828,0,0,1.45579603071565,0.356857977594324,0.473107245101804,0.35142424497814,0,0,1.03473071292505,0,0.921845842708516,0,0.587403472388222,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.767309866440312,0.561320188866147,0.384417447767103,1.02341449813341,0,0,0,0,0,0.519254429183621,0.116210378459959,0,0.200506470303285,0,0.114814448164607,0,0.262248829918848,0,0.847168708148562,0,0,0.73886140225013,0,0.170093705276516,1.29549549661284,0,0.541892875087706,1.50506932156456,0,0,0.447749509444357,0,0,0.769350375349168,0.656029291399411,0.976135183992909,0.9273691048295,1.64825036673018,1.73269949833235,0,0,0,0.676695028044854,0.154048617114644,0.15350367472613,0.137836572484531,0.644521469209642,0.580066775656914,0.426133137080504,0.712256285173899,0,0,0.255225424989168,0,0,0,0,0.924100740528266,0,0,0.18532421910392,0,1.116475108079,0.316379424718726,0,0.255897791311334,0.42793898803392,0.318203247925937,0,0.359744915166629,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0,0,0.329294892959902,0.75894634753143,0.349934720244983,0,0,0,1.03558180854457,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66270448179735,0,0,0.852408440419239,0,0,0,2.98244294329889,3.37606599385231,1.11308705022906,0.16480387422676,0.844501632511974,10.5601433773067,0.828851746593443,1.0077309914171,0.511343412510774,0,0,0,0,0,1.1837208676432,0,0,1.93866549219044,3.8034920246359,9.98068990005971,0,0.349839999984783,0,0,0,0,0.689486746482929,0.874813840149763,2.43074992906609,3.54296554325536,6.87399700164825,1.52581736317083,0.442317039724898,0.886642856860642,3.29078095730959,0,0,6.00212016329617,1.48124672601102,0,0.538545866458633,0.108647371922008,0,0.366390373607449,1.5991043280559,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0,0,0.649165919226273,0,1.41532103205343,0.611030144933625,0.296521128680622,0,0.313265848516366,0.67401132980677,5.61804353109152,3.51396668588009,0,0,0,2.76209081994573,1.20990716048664,16.834001889677,5.11811294990753,0,0.311064574191741,0,0,0.313932918407225,0,0,0.416024019039416,0.173559738335131,0,0.0870592065804026,2.09672001890436,0,0,0,0,1.26085721434945,0,1.12990370390266,0,0,6.45770118749963,0.195551382734803,0.0801588202515337,2.34798294213288,0.39961921916426,0,0,0,0,0,0,2.03856309110421,1.46443984837266,1.22397861163586,1.73370353940911,1.20084057741958,1.36905378891993,0,0,0,1.95497680890578,5.49985017628041,4.30723814746088,0.798716001995964,0.429226048136571,0.89268582976749,3.02325626190268,0,0,0,0,0,0,0,1.59045937961861,2.86027152834309,0.643012593860077,0.550157746388935,0.415440338029185,0,0,9.1124334987037,0,0.945668487590378,3.35709364063988,0,0,0,0,0,0,1.08599920350743,0,0.979762080328227,0,0,1.02232813071253,0.113312091520126,0.58620893471233,0,0.517131825446202,1.58679122091228,0,0,1.38823636338003,3.30129040709298,1.24271716604159,0.496166021811951,0,0,0,1.08803560673895,1.2534494701135,1.22538230705385,0.655745261419609,2.66991963625398,2.65820453990096,4.51497180137264,5.38321002037949,0,0.665574309221114,1.42821726765182,2.35192679391592,0.124980407962107,0,0,0,1.40500471742064,2.46365748638403,0,0,0,0.189403005275089,0.754703705257725,0,0.228840068396924,0,0,0.147855149989634,0.63718706865481,1.34940933649081,2.32894435314389,0,0,0,1.95334891696384,1.14241563650639,0.813741466409323,1.09109195521536,1.50374779859484,3.24823631914946,1.19428766609585,0.400027764663154,0.343395705182793,0.673498977531838,0,0,0,0,0.226705925512272,0,0,0.71635536432595,0.617602894321944,0,0,0,0,0.76872455576384,0,0,5.53033744606923,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,3.19735928259129,0.323474434190045,0.629063767423586,4.04075661310451,0,0.212574920101683,0,1.67593475391973,0,0.394308725006267,2.40171224485641,0,0.3062454773532,5.33102568300614,2.8339315265117,7.02388979851466,3.48697819209284,13.1077282035293,6.08583821685117,5.49017195148294,1.42769420259154,0,0,0,0,0.381382095467167,4.8325194824207,1.19349733269765,2.40673050717623,0.80682027481408,0,0,0,0.295712172434091,5.74069469256355,5.46754669029693,7.02735108104026,6.34158101939068,13.6743702254555,0.548257766857182,2.97726707033577,0,0,0,1.00885116665647,0,0.682986574053893,0.620916591138472,0,5.31612829255997,0.747667062745149,6.64305012984776,0,0,2.19780659981439,8.3271262655481,0,4.56579360254748,1.29556554731173,0,0.571812353413251,1.58013611732727,0,0,2.40513409419076,0,0,0,0.430227358820278,0,0,1.27016115057279,0.68732060563215,0.93061915699296,0.955538938977433,0.559277158988962,0,0,2.58971534875158,0.923965261706223,1.1598144313382,1.94284397223656,1.63757624423474,2.58636007709779,0.118920090777569,0,2.96839395212659,2.8682940277668,0.694567422971502,1.74847648403166,0.940634592723046,3.43207650455468,0.707029641304878,0.588925401344836,0.891139200981258,1.6906229103336,0,3.00748537535531,3.99638905436179,0,0,0,0,3.65168194123259,2.75237570042724,0.286679166302903,0,7.54705541119153,11.7814686391902,2.1161073620616,0,0.462175628631418,0,0,0.218531143927391,0.380095503034311,0.509944148709909,0,0.459474497674225,0.250707539292375,1.89446745545599,0.803892390468535,1.65833887891756,2.1720929130998,1.0661699095049,1.42838658878244,0,0.372448285775147,0.784923038064294,0.381882949668989,1.21270313374932,1.30630048738177,0,0.336760265072938,0.932388670104793,2.66128285236811,1.30245229777559,0.213454691755431,0,0.0898252021065869,0,7.57896953933772,5.2896503181046,1.33151354837103,1.61019034872821,0 | |||
|short_description=p5@KALRN | |||
}} |
Latest revision as of 02:12, 20 September 2015
Short description: | p5@KALRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KALRN_5end |
Coexpression cluster: | C4276_duodenum_occipital_parietal_aorta_temporal_heart_Neural |
Association with transcript: | -340bp_to_uc003ehd.2_5end |
EntrezGene: | KALRN |
HGNC: | 4814 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.21e-07 | 25 |
lymphangioblast | 5.38e-07 | 6 |
endothelial cell of lymphatic vessel | 5.38e-07 | 6 |
vascular lymphangioblast | 5.38e-07 | 6 |