FFCP PHASE1:Mm9::chr16:94681560..94681573,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:94681560..94681573,+|id=chr16:94681560..94681573,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,2.93e-12,23;CL:0000337,2.93e-12,23;CL:0000540,1.17e-07,33;CL:0000047,1.17e-07,33;CL:0000031,1.17e-07,33;CL:0000404,1.17e-07,33;CL:0002612,1.33e-07,3;CL:0002614,6.48e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.11e-13!71;UBERON:0003075!3.11e-13!71;UBERON:0007284!3.11e-13!71;UBERON:0000033!9.29e-12!63;UBERON:0001049!1.76e-11!52;UBERON:0005068!1.76e-11!52;UBERON:0006241!1.76e-11!52;UBERON:0007135!1.76e-11!52;UBERON:0003056!2.15e-11!49;UBERON:0000955!3.53e-11!50;UBERON:0006238!3.53e-11!50;UBERON:0001017!3.86e-11!73;UBERON:0005743!3.86e-11!73;UBERON:0002616!6.98e-11!49;UBERON:0002020!3.27e-10!34;UBERON:0000073!3.38e-10!75;UBERON:0001016!3.38e-10!75;UBERON:0003080!6.09e-10!40;UBERON:0004121!1.01e-09!102;UBERON:0000924!1.01e-09!102;UBERON:0006601!1.01e-09!102;UBERON:0002780!2.02e-09!39;UBERON:0001890!2.02e-09!39;UBERON:0006240!2.02e-09!39;UBERON:0002791!1.36e-08!29;UBERON:0003528!1.36e-08!29;UBERON:0001893!1.36e-08!29;UBERON:0002021!1.13e-07!10;UBERON:0000411!1.13e-07!10;UBERON:0001950!1.13e-07!10;UBERON:0000153!9.64e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.39e-25,54;UBERON:0002020,1.06e-23,34;UBERON:0001049,5.42e-22,52;UBERON:0005068,5.42e-22,52;UBERON:0006241,5.42e-22,52;UBERON:0007135,5.42e-22,52;UBERON:0002346,1.89e-21,64;UBERON:0003075,1.89e-21,64;UBERON:0007284,1.89e-21,64;UBERON:0001017,2.63e-19,73;UBERON:0001016,1.36e-18,75;UBERON:0003528,5.45e-18,29;UBERON:0002791,5.45e-18,29;UBERON:0001893,5.45e-18,29;UBERON:0010371,6.62e-18,73;UBERON:0002021,1.28e-17,10;UBERON:0000411,1.28e-17,10;UBERON:0001950,1.28e-17,10;UBERON:0004121,8.97e-17,95;UBERON:0000924,8.97e-17,95;UBERON:0006601,8.97e-17,95;UBERON:0003056,4.93e-16,49;UBERON:0002616,1.16e-15,46;UBERON:0000955,3.25e-15,47;UBERON:0006238,3.25e-15,47;UBERON:0003080,3.36e-15,40;UBERON:0010314,5.27e-15,92;UBERON:0002780,5.83e-14,39;UBERON:0001890,5.83e-14,39;UBERON:0006240,5.83e-14,39;UBERON:0000956,9.00e-13,21;UBERON:0001869,9.00e-13,21;UBERON:0000203,9.00e-13,21;UBERON:0002619,9.86e-12,17;UBERON:0000025,5.83e-09,114;UBERON:0002240,7.59e-09,6;UBERON:0005174,7.59e-09,6;UBERON:0001137,7.59e-09,6;UBERON:0002950,1.37e-08,4;UBERON:0001891,1.37e-08,4;UBERON:0009616,1.37e-08,4;UBERON:0010286,1.37e-08,4;UBERON:0004111,6.41e-08,122;UBERON:0003076,1.33e-07,12;UBERON:0003057,1.33e-07,12;UBERON:0002257,1.33e-07,3;UBERON:0001948,2.63e-07,5;UBERON:0002315,2.63e-07,5;UBERON:0002038,6.48e-07,3;UBERON:0009663,6.48e-07,3;UBERON:0009661,6.48e-07,3;UBERON:0000125,6.48e-07,3;UBERON:0002308,6.48e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.510259740906419,0.297872853602656,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,1.14058573539325,0.270011876663381,0.420649922702764,0,1.32521124570968,0.122490799214954,0.575072826109418,0,1.10115880999389,2.17068474744819,1.38245879930619,0.395658863190582,1.55528994124096,0,1.11673199600552,1.68828783009504,2.75036845998258,2.94628585473668,2.70506193518296,1.67759501242771,0,0,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0.35333957451034,0,0,0,0,0.216491041011214,0,0.505524445014783,0.22836775943812,0,0,0.693941307064543,0.913396434936424,0.230615497256059,0.452167921657868,0.587943535678524,0.251333182659351,0,0,0,0.323533699894818,0,0.484875253135222,0,0,0.628340120440365,0.255457055208591,0.11981512450592,0,0,1.49790639404823,0.457500602818626,2.1361239859187,1.21677024134594,1.53429274398198,0.41557608911912,1.78465389374533,0.81471491080253,0.124406970610093,0.252722758433675,0,1.17108398666433,0,0.720248519221397,2.10986744970001,0.408218994907967,0.896796041993948,0.655912071918102,1.29351685369508,0,0.567318240503458,0.879755620819744,0.43839146485515,1.39023624612799,0,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,0.473489471170421,0.590292695242212,1.07986979021165,0.930135779001631,0.536546802799238,0,1.48103864922132,0.656669856316381,0.243206428637567,0.584799949701329,0.219550115291051,0.134206418760372,0.841159794256509,1.64647379806855,0,0,1.06644125267617,2.09013004674395,0.515469845288373,0.201683524623343,0.444756087689741,0,0.949058123089023,0.164698954724011,0.502670417600539,0.198956472041151,0,0,0,0,0,0.571242563048644,0,0.610953983535943,0.387904974335251,0.49095073923223,0.316182685621286,0.295220295959204,0.31399745568275,0,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0,0,0,4.31304619582064,0,0.936113019343682,0.252578877947112,0.179397413521912,0,0,0.378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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:94681560..94681573,+ | |||
|description=CAGE_peak_at_chr16:94681560..94681573,+ | |||
|id=chr16:94681560..94681573,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.93e-12,23;CL:0000337,2.93e-12,23;CL:0000540,1.17e-07,33;CL:0000047,1.17e-07,33;CL:0000031,1.17e-07,33;CL:0000404,1.17e-07,33;CL:0002612,1.33e-07,3;CL:0002614,6.48e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.11e-13!71;UBERON:0003075!3.11e-13!71;UBERON:0007284!3.11e-13!71;UBERON:0000033!9.29e-12!63;UBERON:0001049!1.76e-11!52;UBERON:0005068!1.76e-11!52;UBERON:0006241!1.76e-11!52;UBERON:0007135!1.76e-11!52;UBERON:0003056!2.15e-11!49;UBERON:0000955!3.53e-11!50;UBERON:0006238!3.53e-11!50;UBERON:0001017!3.86e-11!73;UBERON:0005743!3.86e-11!73;UBERON:0002616!6.98e-11!49;UBERON:0002020!3.27e-10!34;UBERON:0000073!3.38e-10!75;UBERON:0001016!3.38e-10!75;UBERON:0003080!6.09e-10!40;UBERON:0004121!1.01e-09!102;UBERON:0000924!1.01e-09!102;UBERON:0006601!1.01e-09!102;UBERON:0002780!2.02e-09!39;UBERON:0001890!2.02e-09!39;UBERON:0006240!2.02e-09!39;UBERON:0002791!1.36e-08!29;UBERON:0003528!1.36e-08!29;UBERON:0001893!1.36e-08!29;UBERON:0002021!1.13e-07!10;UBERON:0000411!1.13e-07!10;UBERON:0001950!1.13e-07!10;UBERON:0000153!9.64e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.39e-25,54;UBERON:0002020,1.06e-23,34;UBERON:0001049,5.42e-22,52;UBERON:0005068,5.42e-22,52;UBERON:0006241,5.42e-22,52;UBERON:0007135,5.42e-22,52;UBERON:0002346,1.89e-21,64;UBERON:0003075,1.89e-21,64;UBERON:0007284,1.89e-21,64;UBERON:0001017,2.63e-19,73;UBERON:0001016,1.36e-18,75;UBERON:0003528,5.45e-18,29;UBERON:0002791,5.45e-18,29;UBERON:0001893,5.45e-18,29;UBERON:0010371,6.62e-18,73;UBERON:0002021,1.28e-17,10;UBERON:0000411,1.28e-17,10;UBERON:0001950,1.28e-17,10;UBERON:0004121,8.97e-17,95;UBERON:0000924,8.97e-17,95;UBERON:0006601,8.97e-17,95;UBERON:0003056,4.93e-16,49;UBERON:0002616,1.16e-15,46;UBERON:0000955,3.25e-15,47;UBERON:0006238,3.25e-15,47;UBERON:0003080,3.36e-15,40;UBERON:0010314,5.27e-15,92;UBERON:0002780,5.83e-14,39;UBERON:0001890,5.83e-14,39;UBERON:0006240,5.83e-14,39;UBERON:0000956,9.00e-13,21;UBERON:0001869,9.00e-13,21;UBERON:0000203,9.00e-13,21;UBERON:0002619,9.86e-12,17;UBERON:0000025,5.83e-09,114;UBERON:0002240,7.59e-09,6;UBERON:0005174,7.59e-09,6;UBERON:0001137,7.59e-09,6;UBERON:0002950,1.37e-08,4;UBERON:0001891,1.37e-08,4;UBERON:0009616,1.37e-08,4;UBERON:0010286,1.37e-08,4;UBERON:0004111,6.41e-08,122;UBERON:0003076,1.33e-07,12;UBERON:0003057,1.33e-07,12;UBERON:0002257,1.33e-07,3;UBERON:0001948,2.63e-07,5;UBERON:0002315,2.63e-07,5;UBERON:0002038,6.48e-07,3;UBERON:0009663,6.48e-07,3;UBERON:0009661,6.48e-07,3;UBERON:0000125,6.48e-07,3;UBERON:0002308,6.48e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.510259740906419,0.297872853602656,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,1.14058573539325,0.270011876663381,0.420649922702764,0,1.32521124570968,0.122490799214954,0.575072826109418,0,1.10115880999389,2.17068474744819,1.38245879930619,0.395658863190582,1.55528994124096,0,1.11673199600552,1.68828783009504,2.75036845998258,2.94628585473668,2.70506193518296,1.67759501242771,0,0,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0.35333957451034,0,0,0,0,0.216491041011214,0,0.505524445014783,0.22836775943812,0,0,0.693941307064543,0.913396434936424,0.230615497256059,0.452167921657868,0.587943535678524,0.251333182659351,0,0,0,0.323533699894818,0,0.484875253135222,0,0,0.628340120440365,0.255457055208591,0.11981512450592,0,0,1.49790639404823,0.457500602818626,2.1361239859187,1.21677024134594,1.53429274398198,0.41557608911912,1.78465389374533,0.81471491080253,0.124406970610093,0.252722758433675,0,1.17108398666433,0,0.720248519221397,2.10986744970001,0.408218994907967,0.896796041993948,0.655912071918102,1.29351685369508,0,0.567318240503458,0.879755620819744,0.43839146485515,1.39023624612799,0,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,0.473489471170421,0.590292695242212,1.07986979021165,0.930135779001631,0.536546802799238,0,1.48103864922132,0.656669856316381,0.243206428637567,0.584799949701329,0.219550115291051,0.134206418760372,0.841159794256509,1.64647379806855,0,0,1.06644125267617,2.09013004674395,0.515469845288373,0.201683524623343,0.444756087689741,0,0.949058123089023,0.164698954724011,0.502670417600539,0.198956472041151,0,0,0,0,0,0.571242563048644,0,0.610953983535943,0.387904974335251,0.49095073923223,0.316182685621286,0.295220295959204,0.31399745568275,0,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0,0,0,4.31304619582064,0,0.936113019343682,0.252578877947112,0.179397413521912,0,0,0.37898282354097,0,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.315270288212382,0.221464689648775,0,0.81931657357869,0.345369963731791,0,0,0,0,0,1.44495530989013,1.17211686592203,0.655739781506702,0.252470927204373,0,0.390438744296638,0.430846795465598,0,0.222798674082394,0.283076530788832,0.809621403349789,0.584511715822624,0,0.642642632843614,0,0,0.651547837414304,0.164970122972535,0,0.971122544619926,0,0.188605079755898,0,0,0,0.727067458955011,0.356497378384721,0,0,0,0.680879211507576,0.540183282093931,0,0.857348140126369,0,0.713475270408282,0.658196082408484,0.304464949114599,0,0.21183207086382,0,0,0.322928853391811,0.120625849856312,0.238744688006273,0,0.582961673259701,1.29797711407357,0,0,0.370389054739423,0,0.27338845544205,0,0.169978429993855,0,0,0.954670618015114,0.316335993581135,0.609958401380546,0.648032044930808,0,0,0.404593039154462,0.0826534557253359,0,0,0,0,0.299033092087958,0,0,0.645799117388655,1.520605129417,0.704143431874524,0.39061315453185,0.314578033277133,0.483168241652012,0.864090018773596,0.316011120628178,0,0.410843828659309,0.25984164595559,0,0.198681354781265,0.240390899039938,0.147689527174577,0,0.304827226619999,0.201652370273681,0.194915761479505,0.0962118416403295,0,0.453460767230423,0,0.0897138566094757,0,0,0.187682475451182,0.36630324853453,0,0,2.25900737046827,2.76195141904306,2.29158205375759,2.23409137046794,2.74033007908257,2.2661816921691,2.02506750069542,0.45032120322422,1.81256963593682,4.65984280576638,0.518936737920883,0.399024873401031,0.682934423016537,0.972426868273176,0,0.367687016900028,0,0.618105171716683,0.320919209591815,0.505394423527595,0.50695859978048,0.565879024158229,0.187283014939765,0.448176066834085,0.229741875822453,0,0.347652977834566,1.15745532278223,0,1.03039244094078,0.685738504770831,0.887379030796687,0.953744759789284,0.581385666529314,0.376437521661322,0.423073039458382,0.548783918618318,1.05227884575137,0.543216455383447,0.561142271657738,0.711810108745045,0.492522411877817,1.63692417267876,0.464810523557898,0.192906610981141,0.999242311751784,0,0,0.765153328275374,0,0 | |||
|short_description=p@chr16:94681560..94681573,+ | |||
}} |
Latest revision as of 05:57, 4 August 2015
Short description: | p@chr16:94681560..94681573, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:94681560..94681573, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.93e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.93e-12 | 23 |
neuron | 1.17e-07 | 33 |
neuronal stem cell | 1.17e-07 | 33 |
neuroblast | 1.17e-07 | 33 |
electrically signaling cell | 1.17e-07 | 33 |
neuron of the ventral spinal cord | 1.33e-07 | 3 |
neuron of the substantia nigra | 6.48e-07 | 3 |