FFCP PHASE1:Mm9::chr2:25947512..25947523,-: Difference between revisions
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{{FFCP|EntrezGene=67991|HGNC=|MCL_coexpression_id=20|UniProt=Q9DCM7|association_with_transcript=173bp_to_,-173bp_to_ENSMUST00000114159,ENSMUST00000152133_5end|description=CAGE_peak_7_at_Nacc2_5end|id=chr2:25947512..25947523,-|ontology_enrichment_celltype=CL:0000221!2.03e-13!44;CL:0000133!2.03e-13!44;CL:0002319!1.01e-12!43;CL:0000055!2.49e-12!50;CL:0000117!3.17e-10!23;CL:0000337!3.17e-10!23;CL:0000393!8.73e-08!39;CL:0000211!8.73e-08!39;CL:0000540!1.49e-07!33;CL:0000047!1.49e-07!33;CL:0000031!1.49e-07!33;CL:0000404!1.49e-07!33;CL:0000333!4.57e-07!10;CL:0000095!4.57e-07!10;CL:0000243!4.57e-07!10;CL:0000123!4.57e-07!10;CL:0000125!4.57e-07!10;CL:0000030!4.57e-07!10;CL:0000339!4.57e-07!10;CL:0002321!8.24e-07!70;CL:0000220!8.24e-07!70|ontology_enrichment_celltype_v019_2=CL:0000221,3.11e-14,44;CL:0000133,3.11e-14,44;CL:0002319,6.55e-13,43;CL:0002453,1.11e-10,8;CL:0000117,4.44e-09,23;CL:0000337,4.44e-09,23;CL:0002610,4.81e-09,3;CL:0002321,1.97e-08,70;CL:0000333,2.09e-08,10;CL:0000095,2.09e-08,10;CL:0000243,2.09e-08,10;CL:0000123,2.09e-08,10;CL:0000125,2.09e-08,10;CL:0000030,2.09e-08,10;CL:0000339,2.09e-08,10;CL:0002614,2.77e-08,3;CL:0000540,5.68e-07,33;CL:0000047,5.68e-07,33;CL:0000031,5.68e-07,33;CL:0000404,5.68e-07,33;CL:0000128,7.17e-07,6;CL:0000126,7.17e-07,6;CL:0000127,7.17e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!8.67e-24!75;UBERON:0001016!8.67e-24!75;UBERON:0004121!6.33e-23!102;UBERON:0000924!6.33e-23!102;UBERON:0006601!6.33e-23!102;UBERON:0001017!1.89e-22!73;UBERON:0005743!1.89e-22!73;UBERON:0000033!2.01e-19!63;UBERON:0001049!4.99e-18!52;UBERON:0005068!4.99e-18!52;UBERON:0006241!4.99e-18!52;UBERON:0007135!4.99e-18!52;UBERON:0000955!1.67e-17!50;UBERON:0006238!1.67e-17!50;UBERON:0002616!1.07e-16!49;UBERON:0002346!3.27e-15!71;UBERON:0003075!3.27e-15!71;UBERON:0007284!3.27e-15!71;UBERON:0002020!1.61e-14!34;UBERON:0002791!1.32e-11!29;UBERON:0003528!1.32e-11!29;UBERON:0001893!1.32e-11!29;UBERON:0003056!1.40e-11!49;UBERON:0003080!5.53e-11!40;UBERON:0002780!2.94e-10!39;UBERON:0001890!2.94e-10!39;UBERON:0006240!2.94e-10!39;UBERON:0000153!6.83e-10!94;UBERON:0007811!9.96e-10!86;UBERON:0003076!1.51e-08!12;UBERON:0003057!1.51e-08!12;UBERON:0000956!5.82e-07!21;UBERON:0001869!5.82e-07!21;UBERON:0000203!5.82e-07!21;UBERON:0002298!7.40e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.60e-31,73;UBERON:0001016,2.69e-30,75;UBERON:0000073,2.90e-26,54;UBERON:0004121,3.47e-24,95;UBERON:0000924,3.47e-24,95;UBERON:0006601,3.47e-24,95;UBERON:0001049,1.07e-22,52;UBERON:0005068,1.07e-22,52;UBERON:0006241,1.07e-22,52;UBERON:0007135,1.07e-22,52;UBERON:0000955,5.48e-21,47;UBERON:0006238,5.48e-21,47;UBERON:0002616,2.40e-19,46;UBERON:0010371,1.40e-17,73;UBERON:0002346,2.13e-17,64;UBERON:0003075,2.13e-17,64;UBERON:0007284,2.13e-17,64;UBERON:0003076,4.50e-13,12;UBERON:0003057,4.50e-13,12;UBERON:0010314,9.93e-13,92;UBERON:0002020,1.06e-12,34;UBERON:0003080,4.00e-12,40;UBERON:0003528,2.72e-11,29;UBERON:0002791,2.72e-11,29;UBERON:0001893,2.72e-11,29;UBERON:0004733,3.85e-11,6;UBERON:0004732,3.85e-11,6;UBERON:0002028,3.85e-11,6;UBERON:0007277,3.85e-11,6;UBERON:0002780,9.45e-11,39;UBERON:0001890,9.45e-11,39;UBERON:0006240,9.45e-11,39;UBERON:0002950,1.18e-10,4;UBERON:0001891,1.18e-10,4;UBERON:0009616,1.18e-10,4;UBERON:0010286,1.18e-10,4;UBERON:0003056,3.03e-09,49;UBERON:0004684,4.81e-09,3;UBERON:0002275,4.81e-09,3;UBERON:0004111,5.07e-09,122;UBERON:0002038,2.77e-08,3;UBERON:0009663,2.77e-08,3;UBERON:0009661,2.77e-08,3;UBERON:0000125,2.77e-08,3;UBERON:0002308,2.77e-08,3;UBERON:0011216,3.08e-08,194;UBERON:0000025,3.38e-08,114;UBERON:0002420,1.70e-07,8;UBERON:0007245,1.70e-07,8;UBERON:0010009,1.70e-07,8;UBERON:0010011,1.70e-07,8;UBERON:0000454,1.70e-07,8|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,0.506884656097573,0,0,3.70642765846759,1.5378032791413,2.13872888981712,0.979904951377538,1.43752564364972,0,0,0,0.771778308107841,0,0,1.01158230429799,0.528990979272033,0,0,0,0,0,0,1.19840044207362,2.30530983192933,0.311068836925433,0.135005938331691,0,1.71390590642282,0.662605622854841,0.244981598429908,0.191690942036473,0,6.60695285996332,3.19218345212969,3.5329502648936,0.527545150920775,0.0914876436024097,1.04182674111352,4.18774498502071,1.12552522006336,3.36156145108982,1.76777151284201,0.142371680799103,0.931997229126503,0.757261933331841,0.604572480854284,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,1.54927761754349,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352766121407114,0,0,0.144599356919912,0,0.485300549842228,0,0,0,2.63502717310392,1.46612694769419,0,0,0,0,2.99581278809645,1.83000241127451,0.376963056338593,1.91206752211504,0.511430914660661,2.90903262383384,2.10913641988085,0,0,0,0.210441855886474,0,0.459804208866946,0.180062129805349,0,0.340182495756639,0,0.187403449119458,0.258703370739016,0.215567992932842,0,0,0.43839146485515,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.720332286654991,0,0,0.213288250535234,0,0,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,1.1270773567308,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0.339490171550376,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0,0.491764273019036,0.275936746304732,5.29816946959713,4.21962071731931,1.63934945376675,0,0,0,0.215423397732799,0,0,0,0,0,0.395287777946524,2.24924921495265,0.141940085208269,0,0,0,0,0,0,0,0.590603785761546,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.322928853391811,0,0.238744688006273,0,0,6.67531087237835,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0.258319646955462,0,0,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,1.6942555278512,0,1.14579102687879,0.68741272937475,1.37016503954128,1.5107877947794,0,0.900642406448441,0,0.51776031175182,0.207574695168353,0,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0,0,0,0.37456602987953,0.256100609619477,0.229741875822453,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p7@Nacc2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67991 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DCM7 | |||
|association_with_transcript=173bp_to_,-173bp_to_ENSMUST00000114159,ENSMUST00000152133_5end | |||
|cluster_id=chr2:25947512..25947523,- | |||
|description=CAGE_peak_7_at_Nacc2_5end | |||
|id=chr2:25947512..25947523,- | |||
|ontology_enrichment_celltype=CL:0000221!2.03e-13!44;CL:0000133!2.03e-13!44;CL:0002319!1.01e-12!43;CL:0000055!2.49e-12!50;CL:0000117!3.17e-10!23;CL:0000337!3.17e-10!23;CL:0000393!8.73e-08!39;CL:0000211!8.73e-08!39;CL:0000540!1.49e-07!33;CL:0000047!1.49e-07!33;CL:0000031!1.49e-07!33;CL:0000404!1.49e-07!33;CL:0000333!4.57e-07!10;CL:0000095!4.57e-07!10;CL:0000243!4.57e-07!10;CL:0000123!4.57e-07!10;CL:0000125!4.57e-07!10;CL:0000030!4.57e-07!10;CL:0000339!4.57e-07!10;CL:0002321!8.24e-07!70;CL:0000220!8.24e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.11e-14,44;CL:0000133,3.11e-14,44;CL:0002319,6.55e-13,43;CL:0002453,1.11e-10,8;CL:0000117,4.44e-09,23;CL:0000337,4.44e-09,23;CL:0002610,4.81e-09,3;CL:0002321,1.97e-08,70;CL:0000333,2.09e-08,10;CL:0000095,2.09e-08,10;CL:0000243,2.09e-08,10;CL:0000123,2.09e-08,10;CL:0000125,2.09e-08,10;CL:0000030,2.09e-08,10;CL:0000339,2.09e-08,10;CL:0002614,2.77e-08,3;CL:0000540,5.68e-07,33;CL:0000047,5.68e-07,33;CL:0000031,5.68e-07,33;CL:0000404,5.68e-07,33;CL:0000128,7.17e-07,6;CL:0000126,7.17e-07,6;CL:0000127,7.17e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.67e-24!75;UBERON:0001016!8.67e-24!75;UBERON:0004121!6.33e-23!102;UBERON:0000924!6.33e-23!102;UBERON:0006601!6.33e-23!102;UBERON:0001017!1.89e-22!73;UBERON:0005743!1.89e-22!73;UBERON:0000033!2.01e-19!63;UBERON:0001049!4.99e-18!52;UBERON:0005068!4.99e-18!52;UBERON:0006241!4.99e-18!52;UBERON:0007135!4.99e-18!52;UBERON:0000955!1.67e-17!50;UBERON:0006238!1.67e-17!50;UBERON:0002616!1.07e-16!49;UBERON:0002346!3.27e-15!71;UBERON:0003075!3.27e-15!71;UBERON:0007284!3.27e-15!71;UBERON:0002020!1.61e-14!34;UBERON:0002791!1.32e-11!29;UBERON:0003528!1.32e-11!29;UBERON:0001893!1.32e-11!29;UBERON:0003056!1.40e-11!49;UBERON:0003080!5.53e-11!40;UBERON:0002780!2.94e-10!39;UBERON:0001890!2.94e-10!39;UBERON:0006240!2.94e-10!39;UBERON:0000153!6.83e-10!94;UBERON:0007811!9.96e-10!86;UBERON:0003076!1.51e-08!12;UBERON:0003057!1.51e-08!12;UBERON:0000956!5.82e-07!21;UBERON:0001869!5.82e-07!21;UBERON:0000203!5.82e-07!21;UBERON:0002298!7.40e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.60e-31,73;UBERON:0001016,2.69e-30,75;UBERON:0000073,2.90e-26,54;UBERON:0004121,3.47e-24,95;UBERON:0000924,3.47e-24,95;UBERON:0006601,3.47e-24,95;UBERON:0001049,1.07e-22,52;UBERON:0005068,1.07e-22,52;UBERON:0006241,1.07e-22,52;UBERON:0007135,1.07e-22,52;UBERON:0000955,5.48e-21,47;UBERON:0006238,5.48e-21,47;UBERON:0002616,2.40e-19,46;UBERON:0010371,1.40e-17,73;UBERON:0002346,2.13e-17,64;UBERON:0003075,2.13e-17,64;UBERON:0007284,2.13e-17,64;UBERON:0003076,4.50e-13,12;UBERON:0003057,4.50e-13,12;UBERON:0010314,9.93e-13,92;UBERON:0002020,1.06e-12,34;UBERON:0003080,4.00e-12,40;UBERON:0003528,2.72e-11,29;UBERON:0002791,2.72e-11,29;UBERON:0001893,2.72e-11,29;UBERON:0004733,3.85e-11,6;UBERON:0004732,3.85e-11,6;UBERON:0002028,3.85e-11,6;UBERON:0007277,3.85e-11,6;UBERON:0002780,9.45e-11,39;UBERON:0001890,9.45e-11,39;UBERON:0006240,9.45e-11,39;UBERON:0002950,1.18e-10,4;UBERON:0001891,1.18e-10,4;UBERON:0009616,1.18e-10,4;UBERON:0010286,1.18e-10,4;UBERON:0003056,3.03e-09,49;UBERON:0004684,4.81e-09,3;UBERON:0002275,4.81e-09,3;UBERON:0004111,5.07e-09,122;UBERON:0002038,2.77e-08,3;UBERON:0009663,2.77e-08,3;UBERON:0009661,2.77e-08,3;UBERON:0000125,2.77e-08,3;UBERON:0002308,2.77e-08,3;UBERON:0011216,3.08e-08,194;UBERON:0000025,3.38e-08,114;UBERON:0002420,1.70e-07,8;UBERON:0007245,1.70e-07,8;UBERON:0010009,1.70e-07,8;UBERON:0010011,1.70e-07,8;UBERON:0000454,1.70e-07,8 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,0.506884656097573,0,0,3.70642765846759,1.5378032791413,2.13872888981712,0.979904951377538,1.43752564364972,0,0,0,0.771778308107841,0,0,1.01158230429799,0.528990979272033,0,0,0,0,0,0,1.19840044207362,2.30530983192933,0.311068836925433,0.135005938331691,0,1.71390590642282,0.662605622854841,0.244981598429908,0.191690942036473,0,6.60695285996332,3.19218345212969,3.5329502648936,0.527545150920775,0.0914876436024097,1.04182674111352,4.18774498502071,1.12552522006336,3.36156145108982,1.76777151284201,0.142371680799103,0.931997229126503,0.757261933331841,0.604572480854284,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,1.54927761754349,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352766121407114,0,0,0.144599356919912,0,0.485300549842228,0,0,0,2.63502717310392,1.46612694769419,0,0,0,0,2.99581278809645,1.83000241127451,0.376963056338593,1.91206752211504,0.511430914660661,2.90903262383384,2.10913641988085,0,0,0,0.210441855886474,0,0.459804208866946,0.180062129805349,0,0.340182495756639,0,0.187403449119458,0.258703370739016,0.215567992932842,0,0,0.43839146485515,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.720332286654991,0,0,0.213288250535234,0,0,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,1.1270773567308,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0.339490171550376,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0,0.491764273019036,0.275936746304732,5.29816946959713,4.21962071731931,1.63934945376675,0,0,0,0.215423397732799,0,0,0,0,0,0.395287777946524,2.24924921495265,0.141940085208269,0,0,0,0,0,0,0,0.590603785761546,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.322928853391811,0,0.238744688006273,0,0,6.67531087237835,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0.258319646955462,0,0,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,1.6942555278512,0,1.14579102687879,0.68741272937475,1.37016503954128,1.5107877947794,0,0.900642406448441,0,0.51776031175182,0.207574695168353,0,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0,0,0,0.37456602987953,0.256100609619477,0.229741875822453,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p7@Nacc2 | |||
}} |
Latest revision as of 10:47, 26 September 2015
Short description: | p7@Nacc2 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Nacc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 173bp_to_, -173bp_to_ENSMUST00000114159, ENSMUST00000152133_5end |
EntrezGene: | Nacc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.11e-14 | 44 |
neurectodermal cell | 3.11e-14 | 44 |
neural cell | 6.55e-13 | 43 |
oligodendrocyte precursor cell | 1.11e-10 | 8 |
CNS neuron (sensu Vertebrata) | 4.44e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.44e-09 | 23 |
raphe nuclei neuron | 4.81e-09 | 3 |
embryonic cell | 1.97e-08 | 70 |
migratory neural crest cell | 2.09e-08 | 10 |
neuron associated cell | 2.09e-08 | 10 |
glial cell (sensu Vertebrata) | 2.09e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 2.09e-08 | 10 |
glial cell | 2.09e-08 | 10 |
glioblast | 2.09e-08 | 10 |
glioblast (sensu Vertebrata) | 2.09e-08 | 10 |
neuron of the substantia nigra | 2.77e-08 | 3 |
neuron | 5.68e-07 | 33 |
neuronal stem cell | 5.68e-07 | 33 |
neuroblast | 5.68e-07 | 33 |
electrically signaling cell | 5.68e-07 | 33 |
oligodendrocyte | 7.17e-07 | 6 |
macroglial cell | 7.17e-07 | 6 |
astrocyte | 7.17e-07 | 6 |