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FFCP PHASE1:Mm9::chr4:122878746..122878772,+: Difference between revisions

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{{FFCP|EntrezGene=230718|HGNC=|MCL_coexpression_id=1677|UniProt=A3KFX0|association_with_transcript=0bp_to_ENSMUST00000068262_5end|description=CAGE_peak_2_at_Nt5c1a_5end|id=chr4:122878746..122878772,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.70e-16!50;UBERON:0006238!1.70e-16!50;UBERON:0002616!1.16e-15!49;UBERON:0001049!3.52e-15!52;UBERON:0005068!3.52e-15!52;UBERON:0006241!3.52e-15!52;UBERON:0007135!3.52e-15!52;UBERON:0000033!1.92e-13!63;UBERON:0001017!2.23e-13!73;UBERON:0005743!2.23e-13!73;UBERON:0000073!4.25e-13!75;UBERON:0001016!4.25e-13!75;UBERON:0002346!5.37e-13!71;UBERON:0003075!5.37e-13!71;UBERON:0007284!5.37e-13!71;UBERON:0004121!4.03e-12!102;UBERON:0000924!4.03e-12!102;UBERON:0006601!4.03e-12!102;UBERON:0004111!8.11e-10!122;UBERON:0003080!1.00e-09!40;UBERON:0002021!2.33e-09!10;UBERON:0000411!2.33e-09!10;UBERON:0001950!2.33e-09!10;UBERON:0002780!4.09e-09!39;UBERON:0001890!4.09e-09!39;UBERON:0006240!4.09e-09!39;UBERON:0000025!1.14e-08!114;UBERON:0002020!1.75e-08!34;UBERON:0007811!5.06e-08!86;UBERON:0002791!1.85e-07!29;UBERON:0003528!1.85e-07!29;UBERON:0001893!1.85e-07!29;UBERON:0003056!2.13e-07!49;UBERON:0003076!8.63e-07!12;UBERON:0003057!8.63e-07!12;UBERON:0002619!8.74e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.66e-22,92;UBERON:0000073,1.28e-21,54;UBERON:0001049,6.50e-19,52;UBERON:0005068,6.50e-19,52;UBERON:0006241,6.50e-19,52;UBERON:0007135,6.50e-19,52;UBERON:0000955,8.39e-19,47;UBERON:0006238,8.39e-19,47;UBERON:0001017,9.08e-18,73;UBERON:0002616,1.87e-17,46;UBERON:0001016,4.72e-17,75;UBERON:0002021,1.88e-16,10;UBERON:0000411,1.88e-16,10;UBERON:0001950,1.88e-16,10;UBERON:0002346,6.49e-14,64;UBERON:0003075,6.49e-14,64;UBERON:0007284,6.49e-14,64;UBERON:0004111,8.30e-14,122;UBERON:0004121,1.71e-13,95;UBERON:0000924,1.71e-13,95;UBERON:0006601,1.71e-13,95;UBERON:0000025,1.32e-12,114;UBERON:0003080,2.70e-12,40;UBERON:0002020,6.50e-12,34;UBERON:0003528,9.56e-12,29;UBERON:0002791,9.56e-12,29;UBERON:0001893,9.56e-12,29;UBERON:0002780,2.78e-11,39;UBERON:0001890,2.78e-11,39;UBERON:0006240,2.78e-11,39;UBERON:0010371,2.85e-11,73;UBERON:0002619,1.30e-10,17;UBERON:0000956,1.29e-09,21;UBERON:0001869,1.29e-09,21;UBERON:0000203,1.29e-09,21;UBERON:0003056,4.61e-09,49;UBERON:0003076,9.08e-08,12;UBERON:0003057,9.08e-08,12;UBERON:0002950,1.93e-07,4;UBERON:0001891,1.93e-07,4;UBERON:0009616,1.93e-07,4;UBERON:0010286,1.93e-07,4;UBERON:0004733,2.00e-07,6;UBERON:0004732,2.00e-07,6;UBERON:0002028,2.00e-07,6;UBERON:0007277,2.00e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.218025156380447,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,1.49800055259202,0.384218305321555,0,0,0,1.14260393761521,1.54607978666129,0,0,0,7.70811166995721,5.61824287574826,4.91540906419979,0,0.0914876436024097,0,5.862842979029,3.37657566019008,3.20876320331301,0.294628585473668,0.284743361598206,0,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,20.6334573300106,0,0.913396434936424,0,1.80867168663147,0.705532242814229,6.03199638382442,0,1.01219549843938,0,0.323533699894818,0,0,1.86391761218122,5.27005434620785,5.65506108396329,0,0,0,0,4.04434726393021,1.83000241127451,0.502617408451458,1.91206752211504,1.79000820131231,4.77912502486988,2.43361894601636,0,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0.696504333044333,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.473489471170421,1.18058539048442,1.07986979021165,1.86027155800326,0.804820204198858,1.16765342367169,1.6455984991348,1.64167464079095,2.35099547682982,4.82459958503597,4.17145219052996,4.16039898157152,4.20579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79763881730844,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.350679099451593,1.20149420536089,0,0.156998727841375,0.616985819609003,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,5.45872005958493,4.45404409050372,0,3.02965112645248,0,0,0,0,0,0,0,0,0,7.71171159412337,0,0,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0.354680467284547,1.07021290561242,0.658196082408484,0.608929898229199,0,0,2.20528398054962,0,0.161464426695906,0.0603129249281559,0,0,0.582961673259701,4.26478194624172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,1.24267862617385,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0.116876902181569,2.0405734525369,1.55390167361845,1.88399098879899,0,0.772758376128762,0.375364950902364,0,0.214368379079066,0,5.0827665835536,4.14292712856459,5.72895513439397,5.32744865265431,4.7955776383945,3.0215755895588,3.37511250115903,3.15224842256954,2.71885445390523,5.69536342927002,0,0,0,0,0,0.367687016900028,0.44449345560323,0.412070114477788,0.320919209591815,0,0.50695859978048,0.188626341386076,0.280924522409647,0.0640251524048693,0.459483751644906,0,0,0,0.412085900803307,0.147198920134397,0,0.354951612318675,0,0.290692833264657,0.0941093804153306,0.169229215783353,0,0,0.543216455383447,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.695603506861264|short_description=p2@Nt5c1a}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=230718
|HGNC=
|MCL_coexpression_id=1677
|TSSclassifier=NA
|UniProt=A3KFX0
|association_with_transcript=0bp_to_ENSMUST00000068262_5end
|cluster_id=chr4:122878746..122878772,+
|description=CAGE_peak_2_at_Nt5c1a_5end
|id=chr4:122878746..122878772,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!1.70e-16!50;UBERON:0006238!1.70e-16!50;UBERON:0002616!1.16e-15!49;UBERON:0001049!3.52e-15!52;UBERON:0005068!3.52e-15!52;UBERON:0006241!3.52e-15!52;UBERON:0007135!3.52e-15!52;UBERON:0000033!1.92e-13!63;UBERON:0001017!2.23e-13!73;UBERON:0005743!2.23e-13!73;UBERON:0000073!4.25e-13!75;UBERON:0001016!4.25e-13!75;UBERON:0002346!5.37e-13!71;UBERON:0003075!5.37e-13!71;UBERON:0007284!5.37e-13!71;UBERON:0004121!4.03e-12!102;UBERON:0000924!4.03e-12!102;UBERON:0006601!4.03e-12!102;UBERON:0004111!8.11e-10!122;UBERON:0003080!1.00e-09!40;UBERON:0002021!2.33e-09!10;UBERON:0000411!2.33e-09!10;UBERON:0001950!2.33e-09!10;UBERON:0002780!4.09e-09!39;UBERON:0001890!4.09e-09!39;UBERON:0006240!4.09e-09!39;UBERON:0000025!1.14e-08!114;UBERON:0002020!1.75e-08!34;UBERON:0007811!5.06e-08!86;UBERON:0002791!1.85e-07!29;UBERON:0003528!1.85e-07!29;UBERON:0001893!1.85e-07!29;UBERON:0003056!2.13e-07!49;UBERON:0003076!8.63e-07!12;UBERON:0003057!8.63e-07!12;UBERON:0002619!8.74e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.66e-22,92;UBERON:0000073,1.28e-21,54;UBERON:0001049,6.50e-19,52;UBERON:0005068,6.50e-19,52;UBERON:0006241,6.50e-19,52;UBERON:0007135,6.50e-19,52;UBERON:0000955,8.39e-19,47;UBERON:0006238,8.39e-19,47;UBERON:0001017,9.08e-18,73;UBERON:0002616,1.87e-17,46;UBERON:0001016,4.72e-17,75;UBERON:0002021,1.88e-16,10;UBERON:0000411,1.88e-16,10;UBERON:0001950,1.88e-16,10;UBERON:0002346,6.49e-14,64;UBERON:0003075,6.49e-14,64;UBERON:0007284,6.49e-14,64;UBERON:0004111,8.30e-14,122;UBERON:0004121,1.71e-13,95;UBERON:0000924,1.71e-13,95;UBERON:0006601,1.71e-13,95;UBERON:0000025,1.32e-12,114;UBERON:0003080,2.70e-12,40;UBERON:0002020,6.50e-12,34;UBERON:0003528,9.56e-12,29;UBERON:0002791,9.56e-12,29;UBERON:0001893,9.56e-12,29;UBERON:0002780,2.78e-11,39;UBERON:0001890,2.78e-11,39;UBERON:0006240,2.78e-11,39;UBERON:0010371,2.85e-11,73;UBERON:0002619,1.30e-10,17;UBERON:0000956,1.29e-09,21;UBERON:0001869,1.29e-09,21;UBERON:0000203,1.29e-09,21;UBERON:0003056,4.61e-09,49;UBERON:0003076,9.08e-08,12;UBERON:0003057,9.08e-08,12;UBERON:0002950,1.93e-07,4;UBERON:0001891,1.93e-07,4;UBERON:0009616,1.93e-07,4;UBERON:0010286,1.93e-07,4;UBERON:0004733,2.00e-07,6;UBERON:0004732,2.00e-07,6;UBERON:0002028,2.00e-07,6;UBERON:0007277,2.00e-07,6
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.218025156380447,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,1.49800055259202,0.384218305321555,0,0,0,1.14260393761521,1.54607978666129,0,0,0,7.70811166995721,5.61824287574826,4.91540906419979,0,0.0914876436024097,0,5.862842979029,3.37657566019008,3.20876320331301,0.294628585473668,0.284743361598206,0,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,20.6334573300106,0,0.913396434936424,0,1.80867168663147,0.705532242814229,6.03199638382442,0,1.01219549843938,0,0.323533699894818,0,0,1.86391761218122,5.27005434620785,5.65506108396329,0,0,0,0,4.04434726393021,1.83000241127451,0.502617408451458,1.91206752211504,1.79000820131231,4.77912502486988,2.43361894601636,0,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0.696504333044333,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.473489471170421,1.18058539048442,1.07986979021165,1.86027155800326,0.804820204198858,1.16765342367169,1.6455984991348,1.64167464079095,2.35099547682982,4.82459958503597,4.17145219052996,4.16039898157152,4.20579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79763881730844,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.350679099451593,1.20149420536089,0,0.156998727841375,0.616985819609003,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,5.45872005958493,4.45404409050372,0,3.02965112645248,0,0,0,0,0,0,0,0,0,7.71171159412337,0,0,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0.354680467284547,1.07021290561242,0.658196082408484,0.608929898229199,0,0,2.20528398054962,0,0.161464426695906,0.0603129249281559,0,0,0.582961673259701,4.26478194624172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,1.24267862617385,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0.116876902181569,2.0405734525369,1.55390167361845,1.88399098879899,0,0.772758376128762,0.375364950902364,0,0.214368379079066,0,5.0827665835536,4.14292712856459,5.72895513439397,5.32744865265431,4.7955776383945,3.0215755895588,3.37511250115903,3.15224842256954,2.71885445390523,5.69536342927002,0,0,0,0,0,0.367687016900028,0.44449345560323,0.412070114477788,0.320919209591815,0,0.50695859978048,0.188626341386076,0.280924522409647,0.0640251524048693,0.459483751644906,0,0,0,0.412085900803307,0.147198920134397,0,0.354951612318675,0,0.290692833264657,0.0941093804153306,0.169229215783353,0,0,0.543216455383447,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.695603506861264
|short_description=p2@Nt5c1a
}}

Latest revision as of 07:23, 26 September 2015

Short description:p2@Nt5c1a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nt5c1a_5end
Coexpression cluster:MCL_coexpression_mm9:1677
Association with transcript: 0bp_to_ENSMUST00000068262_5end
EntrezGene:Nt5c1a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Nt5c1a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D720.63
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I36.03
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.04
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G12.35
heart, neonate N20.CNhs11127.821-26I64.82
heart, neonate N25.CNhs11196.1351-25D34.17
heart, neonate N30.CNhs11202.1390-42D24.16
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.46
medulla oblongata, neonate N30.CNhs11200.1396-42A34.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I97.71
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.66e-2292
regional part of nervous system1.28e-2154
neural tube6.50e-1952
neural rod6.50e-1952
future spinal cord6.50e-1952
neural keel6.50e-1952
brain8.39e-1947
future brain8.39e-1947
central nervous system9.08e-1873
regional part of brain1.87e-1746
nervous system4.72e-1775
occipital lobe1.88e-1610
visual cortex1.88e-1610
neocortex1.88e-1610
neurectoderm6.49e-1464
neural plate6.49e-1464
presumptive neural plate6.49e-1464
anatomical conduit8.30e-14122
ectoderm-derived structure1.71e-1395
ectoderm1.71e-1395
presumptive ectoderm1.71e-1395
tube1.32e-12114
anterior neural tube2.70e-1240
gray matter6.50e-1234
brain grey matter9.56e-1229
regional part of telencephalon9.56e-1229
telencephalon9.56e-1229
regional part of forebrain2.78e-1139
forebrain2.78e-1139
future forebrain2.78e-1139
ecto-epithelium2.85e-1173
regional part of cerebral cortex1.30e-1017
cerebral cortex1.29e-0921
cerebral hemisphere1.29e-0921
pallium1.29e-0921
pre-chordal neural plate4.61e-0949
posterior neural tube9.08e-0812
chordal neural plate9.08e-0812
regional part of midbrain1.93e-074
midbrain1.93e-074
presumptive midbrain1.93e-074
midbrain neural tube1.93e-074
segmental subdivision of hindbrain2.00e-076
segmental subdivision of nervous system2.00e-076
hindbrain2.00e-076
presumptive hindbrain2.00e-076
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