FFCP PHASE1:Hg19::chr8:24151557..24151590,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10863 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=206 | |||
|TSSclassifier=strong | |||
|UniProt=E7EMU1,E5RGY1,E5RJQ1,B4DDY3,Q9UKQ2 | |||
|association_with_transcript=0bp_to_ENST00000397649,ENST00000520448,ENST00000523379,ENST00000540823,NM_014265,NM_021777,uc003xdx.2,uc003xdy.2,uc011kzz.1,uc011laa.1_5end | |||
|cluster_id=chr8:24151557..24151590,+ | |||
|coexpression_cluster_id=C4745 | |||
|description=CAGE_peak_1_at_ADAM28_5end | |||
|id=chr8:24151557..24151590,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.20e-26!172;CL:0000566!3.20e-26!172;CL:0000738!1.51e-24!140;CL:0002032!3.24e-24!165;CL:0000837!3.24e-24!165;CL:0000763!1.00e-22!112;CL:0000049!1.00e-22!112;CL:0000988!4.27e-22!182;CL:0002057!2.94e-20!42;CL:0000766!6.89e-20!76;CL:0002009!7.55e-20!65;CL:0002087!1.24e-19!119;CL:0002194!1.57e-18!63;CL:0000576!1.57e-18!63;CL:0000040!1.57e-18!63;CL:0000559!1.57e-18!63;CL:0000557!8.70e-18!71;CL:0002031!1.15e-17!124;CL:0000860!1.38e-17!45;CL:0000839!2.94e-16!70;CL:0000236!6.09e-10!14 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.04e-21;39!CL:0000234;3.04e-21;39!CL:0000860;8.68e-21;33!CL:0002057;8.68e-21;33!CL:0000576;1.76e-14;48!CL:0000236;1.14e-11;13!CL:0000766;3.47e-11;69!CL:0000763;1.47e-08;100!CL:0000738;2.65e-07;136!CL:0002087;2.90e-07;104!CL:0000945;5.56e-07;24!CL:0000094;7.65e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.31e-28,168;CL:0000738,2.43e-27,136;CL:0000473,4.38e-26,48;CL:0000234,4.38e-26,48;CL:0000763,8.22e-26,108;CL:0000049,8.22e-26,108;CL:0002032,2.45e-25,161;CL:0000837,2.45e-25,161;CL:0000988,1.24e-24,177;CL:0000766,2.84e-24,72;CL:0002009,4.31e-24,61;CL:0002194,2.04e-22,59;CL:0000576,2.04e-22,59;CL:0000040,2.04e-22,59;CL:0000559,2.04e-22,59;CL:0000557,1.29e-21,67;CL:0000860,2.10e-21,42;CL:0002057,2.10e-21,42;CL:0002087,4.97e-21,115;CL:0000839,5.87e-19,66;CL:0002031,2.31e-18,120;CL:0000236,2.24e-12,14;CL:0000945,5.65e-07,24;CL:0000826,5.65e-07,24;CL:0000094,7.26e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;5.48e-16;42!CL:0000049;4.10e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.72e-41!115;UBERON:0002390!2.53e-17!102;UBERON:0003061!2.53e-17!102;UBERON:0001049!3.96e-16!57;UBERON:0005068!3.96e-16!57;UBERON:0006241!3.96e-16!57;UBERON:0007135!3.96e-16!57;UBERON:0002193!2.54e-15!112;UBERON:0002371!4.68e-14!80;UBERON:0002616!5.40e-13!59;UBERON:0003080!7.99e-13!42;UBERON:0002780!1.14e-12!41;UBERON:0001890!1.14e-12!41;UBERON:0006240!1.14e-12!41;UBERON:0005743!1.16e-11!86;UBERON:0001017!1.52e-11!82;UBERON:0000955!1.59e-11!69;UBERON:0006238!1.59e-11!69;UBERON:0001474!1.67e-11!86;UBERON:0003075!1.45e-10!86;UBERON:0007284!1.45e-10!86;UBERON:0002405!6.46e-10!115;UBERON:0002020!1.58e-09!34;UBERON:0003528!1.58e-09!34;UBERON:0001893!1.88e-09!34;UBERON:0000073!2.03e-09!94;UBERON:0001016!2.03e-09!94;UBERON:0002346!3.37e-09!90;UBERON:0002791!3.63e-09!33;UBERON:0004765!6.18e-09!101;UBERON:0001434!6.18e-09!101;UBERON:0003056!1.74e-08!61;UBERON:0001869!2.03e-08!32;UBERON:0002619!2.15e-07!22;UBERON:0000153!2.83e-07!129;UBERON:0007811!2.83e-07!129;UBERON:0000033!9.57e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.02e-11;114!UBERON:0002780;5.37e-11;41!UBERON:0001890;5.37e-11;41!UBERON:0000073;1.82e-10;53!UBERON:0002616;1.82e-10;53!UBERON:0001893;2.53e-09;34!UBERON:0003528;3.00e-09;34!UBERON:0002020;3.00e-09;34!UBERON:0002791;6.25e-09;32!UBERON:0001869;1.12e-08;32!UBERON:0002619;1.03e-07;22!UBERON:0000125;4.79e-07;9!UBERON:0002308;4.79e-07;9!UBERON:0002420;4.93e-07;9!UBERON:0007245;4.93e-07;9!UBERON:0010009;4.93e-07;9!UBERON:0010011;4.93e-07;9!UBERON:0000454;4.93e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.55e-44,114;UBERON:0002390,2.53e-22,98;UBERON:0003061,2.53e-22,98;UBERON:0002193,4.43e-20,108;UBERON:0001049,1.80e-19,56;UBERON:0005068,1.80e-19,56;UBERON:0006241,1.80e-19,56;UBERON:0007135,1.80e-19,56;UBERON:0002371,6.00e-18,76;UBERON:0000073,1.55e-17,53;UBERON:0002616,1.55e-17,53;UBERON:0002405,5.70e-16,93;UBERON:0001474,2.62e-15,82;UBERON:0002780,8.60e-15,41;UBERON:0001890,8.60e-15,41;UBERON:0003080,8.60e-15,41;UBERON:0006240,8.60e-15,41;UBERON:0004765,5.00e-14,90;UBERON:0000955,2.56e-12,68;UBERON:0006238,2.56e-12,68;UBERON:0001017,7.67e-12,81;UBERON:0001434,1.62e-11,100;UBERON:0003528,6.81e-11,34;UBERON:0002020,6.81e-11,34;UBERON:0001893,8.41e-11,34;UBERON:0003075,9.10e-11,82;UBERON:0007284,9.10e-11,82;UBERON:0002791,7.78e-10,32;UBERON:0001016,1.05e-09,89;UBERON:0002346,1.34e-09,86;UBERON:0001869,1.57e-09,32;UBERON:0003056,3.74e-08,61;UBERON:0002619,1.08e-07,22;UBERON:0002420,4.63e-07,9;UBERON:0007245,4.63e-07,9;UBERON:0010009,4.63e-07,9;UBERON:0010011,4.63e-07,9;UBERON:0000454,4.63e-07,9;UBERON:0000125,4.82e-07,9;UBERON:0002308,4.82e-07,9 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,10.6208354749204,9.59573495243032,14.0882672217629,3.67768489791571,0.30120591877825,0.369754010166788,0.309868802321207,4.54941543959749,16.4416246027514,18.281848481552,16.6451891400218,13.8886957258145,21.7198010012727,20.0814072931767,31.6817948190049,15.5576115494134,16.6265415223076,8.24785808038575,11.3890228083785,11.9238687526329,4.95530193432166,53.2230925795978,76.8482119587302,47.7694104374942,8.27389633767885,10.973239620925,2.70852973188684,11.6710250516415,12.2807767526031,6.51698104890745,12.2433556948361,12.8371610830437,6.39337125799041,77.1852042436916,97.537728576978,71.1795333389599,6.67481248845743,7.94339314567596,6.22822248995575,56.2797010175105,58.9275697814828,45.3924685433694,7.87019353423379,13.6262725315399,6.32924774881769,0.633765858935825,1.06302149982522,1.88692780957538,7.07670376222919,7.65902153491682,7.87555374815693,0.570025487482497,0.59675003159727,0.91332076882317,72.1584602291423,62.259801683883,73.829268070675,74.6777889491388,65.26454588687,72.9935598742194,79.9864296069683,63.9216015538694,117.827084605656,68.1195139670289,97.4796731719334,33.0428321447565,31.388479526966,12.1156678996535,0,0.393010762749165,0,0,0,0.473447805734733,0,0,0.294605907474837,0.221533894583621,0.270803863765016,0,0,0,0,0,0.14828656316206,0,1.04535523804977,0,0,0,0,0.95569624297229,0,0,1.50575119077773,0.895906278080929,1.24930726552346,0.473554504088034,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.472674085820339,0.665188192387692,0.527008714158756,2.0956652079634,0,0,0,0,0.132957960518865,2.62339686735876,4.0039643754609,5.94332002127304,0.198762407366705,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.488124115096339,0,0.81014194788176,0,0,0,0,0,0,28.9916918359339,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0.311211035399766,0.942974704487816,0.817309515567294,0.605429710579726,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45471508531751,0,0,0.132529768321485,0.232387885739037,1.34759371519982,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0.590789906681404,0,0.368965315629341,0.514703430895577,0,0,0,0,0,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0,21.1746625235162,8.19014927987332,16.4980590140488,0.93733833986777,19.8218911274654,6.94697976487694,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,21.8922805154143,41.1850814974344,48.4918060810973,0,0,0,0,0,0,0.560425719967636,3.34952292343276,1.07813787429759,3.85029108839245,0,0,0,0.502548796003046,0,27.7132598860457,17.9496875522415,17.8198670777495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5790094628817,11.4328526433867,5.22965033236877,0,0,0,0.248107807818777,7.51963669111506,0.561320188866147,0,0,0,0,0,0,0,0,0,0,9.2232976339511,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75407901316748,0.784306353074702,0,0.328014645699706,2.27764876265012,2.98818933778395,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97512847649761,0.576570202095319,3.06270509987002,0.6069466851333,0,0,0,0,0,0,0.55597265731176,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0.66343897524122,1.75380354101505,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,1.73199802905922,0.670302275535787,0,2.35359501941948,0.86101074534246,0,0.886860307073351,3.90529780351831,13.1936378400364,18.351292971417,6.83576624608995,15.2468336292985,23.4476495659131,9.72709966789076,14.040817368191,11.8968776444141,0,0,0,14.3068444846803,0,0,0,4.19116680008915,20.1080638638985,8.04359614350755,0,11.5126843026518,13.9223154210247,0.156679895773023,5.01268954180134,21.8386393364068,0.802940375518498,0.605399121573143,2.98092366383228,0.687010689511529,0,0,0.333698283423817,0,0.278406173895242,2.46174797895425,0,0,4.22961015263549,7.29848107592057,3.51619630252546,0,1.33732061132974,0,0.23874448473769,0.296964680832639,0,9.94147647766298,11.9569003948936,0.333926115068718,0.329607748453519,0,10.7593913655578,31.4963663705508,0,0,0,0,2.3365771298305,2.86433879480975,0,10.9494180256996,0,0,3.87733098438087,5.28778159522552,3.99227596002388,0,0,1.44999915086959,0.682760689712998,5.08507300585533,0,0,0,0,19.4863104879045,9.40652221278182,10.6807215421958,2.43274371848694,1.18219047581419,3.07139556015562,0,0,4.30921447621264,2.05095700524602,0,0,0,0.31900115973192,0.183195186803725,3.73124343213044,0,0,16.6211681900156,0,0,0,0,0,0,4.08082020397869,0,0.216388639742091,11.9431431729421,8.31501106331388,5.49927130440263,0,0,0,15.030452654691,2.40773294189637,6.32514003458416,12.042016088234,0.782658475728359,0,4.73501283419269,3.62972148145992,0,24.8323257939958,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0.347119476670262,0.0979923974143777,0,38.9640470179727,0,0,0,0,1.64881328030313,0,3.84167259326905,0,0.397429223405979,5.06486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| |||
|short_description=p1@ADAM28 | |||
}} |
Latest revision as of 15:06, 17 September 2015
Short description: | p1@ADAM28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADAM28_5end |
Coexpression cluster: | C4745_CD19_CD14_stomach_immature_epididymis_spinal_smallcell |
Association with transcript: | 0bp_to_ENST00000397649, ENST00000520448, ENST00000523379, ENST00000540823, NM_014265, NM_021777, uc003xdx.2, uc003xdy.2, uc011kzz.1, uc011laa.1_5end |
EntrezGene: | ADAM28 |
HGNC: | 206 |
UniProt: | E7EMU1E5RGY1E5RJQ1B4DDY3Q9UKQ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.31e-28 | 168 |
leukocyte | 2.43e-27 | 136 |
defensive cell | 4.38e-26 | 48 |
phagocyte | 4.38e-26 | 48 |
myeloid cell | 8.22e-26 | 108 |
common myeloid progenitor | 8.22e-26 | 108 |
hematopoietic oligopotent progenitor cell | 2.45e-25 | 161 |
hematopoietic multipotent progenitor cell | 2.45e-25 | 161 |
hematopoietic cell | 1.24e-24 | 177 |
myeloid leukocyte | 2.84e-24 | 72 |
macrophage dendritic cell progenitor | 4.31e-24 | 61 |
monopoietic cell | 2.04e-22 | 59 |
monocyte | 2.04e-22 | 59 |
monoblast | 2.04e-22 | 59 |
promonocyte | 2.04e-22 | 59 |
granulocyte monocyte progenitor cell | 1.29e-21 | 67 |
classical monocyte | 2.10e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.10e-21 | 42 |
nongranular leukocyte | 4.97e-21 | 115 |
myeloid lineage restricted progenitor cell | 5.87e-19 | 66 |
hematopoietic lineage restricted progenitor cell | 2.31e-18 | 120 |
B cell | 2.24e-12 | 14 |
lymphocyte of B lineage | 5.65e-07 | 24 |
pro-B cell | 5.65e-07 | 24 |
granulocyte | 7.26e-07 | 8 |