FFCP PHASE1:Mm9::chr4:49610732..49610764,-: Difference between revisions
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{{FFCP|EntrezGene=67063|HGNC=|MCL_coexpression_id=13|UniProt=Q91YV9,A2AKL1|association_with_transcript=0bp_to_ENSMUST00000042750,NM_025944,uc008svx.2_5end|description=CAGE_peak_5_at_2810432L12Rik_5end|id=chr4:49610732..49610764,-|ontology_enrichment_celltype=CL:0000221!7.36e-13!44;CL:0000133!7.36e-13!44;CL:0002319!1.49e-12!43;CL:0000117!1.56e-12!23;CL:0000337!1.56e-12!23;CL:0000540!3.74e-10!33;CL:0000047!3.74e-10!33;CL:0000031!3.74e-10!33;CL:0000404!3.74e-10!33;CL:0000055!5.65e-09!50;CL:0000393!2.76e-07!39;CL:0000211!2.76e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,4.65e-17,23;CL:0000337,4.65e-17,23;CL:0000221,5.17e-15,44;CL:0000133,5.17e-15,44;CL:0002319,1.57e-14,43;CL:0000540,9.43e-12,33;CL:0000047,9.43e-12,33;CL:0000031,9.43e-12,33;CL:0000404,9.43e-12,33;CL:0000393,8.01e-09,39;CL:0000211,8.01e-09,39;CL:0002321,4.27e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.57e-24!73;UBERON:0005743!1.57e-24!73;UBERON:0000073!5.68e-24!75;UBERON:0001016!5.68e-24!75;UBERON:0001049!4.37e-20!52;UBERON:0005068!4.37e-20!52;UBERON:0006241!4.37e-20!52;UBERON:0007135!4.37e-20!52;UBERON:0000955!1.33e-18!50;UBERON:0006238!1.33e-18!50;UBERON:0004121!3.50e-18!102;UBERON:0000924!3.50e-18!102;UBERON:0006601!3.50e-18!102;UBERON:0002616!4.20e-18!49;UBERON:0002020!1.33e-17!34;UBERON:0000033!4.65e-17!63;UBERON:0002346!3.44e-16!71;UBERON:0003075!3.44e-16!71;UBERON:0007284!3.44e-16!71;UBERON:0002791!4.44e-14!29;UBERON:0003528!4.44e-14!29;UBERON:0001893!4.44e-14!29;UBERON:0003080!1.53e-13!40;UBERON:0002780!5.97e-13!39;UBERON:0001890!5.97e-13!39;UBERON:0006240!5.97e-13!39;UBERON:0003056!1.39e-12!49;UBERON:0000025!2.31e-11!114;UBERON:0004111!1.78e-10!122;UBERON:0000956!2.51e-09!21;UBERON:0001869!2.51e-09!21;UBERON:0000203!2.51e-09!21;UBERON:0000468!6.40e-09!333;UBERON:0002619!3.50e-08!17;UBERON:0003076!1.64e-07!12;UBERON:0003057!1.64e-07!12;UBERON:0000922!8.68e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.62e-33,73;UBERON:0001016,4.10e-32,75;UBERON:0000073,5.39e-31,54;UBERON:0001049,1.99e-28,52;UBERON:0005068,1.99e-28,52;UBERON:0006241,1.99e-28,52;UBERON:0007135,1.99e-28,52;UBERON:0002020,1.62e-25,34;UBERON:0004121,2.35e-24,95;UBERON:0000924,2.35e-24,95;UBERON:0006601,2.35e-24,95;UBERON:0000955,3.74e-23,47;UBERON:0006238,3.74e-23,47;UBERON:0010314,9.89e-23,92;UBERON:0002346,1.72e-22,64;UBERON:0003075,1.72e-22,64;UBERON:0007284,1.72e-22,64;UBERON:0002616,2.31e-22,46;UBERON:0010371,6.98e-20,73;UBERON:0003528,9.33e-20,29;UBERON:0002791,9.33e-20,29;UBERON:0001893,9.33e-20,29;UBERON:0003080,1.25e-18,40;UBERON:0002780,1.11e-17,39;UBERON:0001890,1.11e-17,39;UBERON:0006240,1.11e-17,39;UBERON:0003056,3.08e-15,49;UBERON:0000025,1.48e-13,114;UBERON:0004111,6.33e-13,122;UBERON:0000956,4.68e-12,21;UBERON:0001869,4.68e-12,21;UBERON:0000203,4.68e-12,21;UBERON:0002619,5.09e-11,17;UBERON:0003076,1.47e-10,12;UBERON:0003057,1.47e-10,12;UBERON:0002021,6.08e-10,10;UBERON:0000411,6.08e-10,10;UBERON:0001950,6.08e-10,10;UBERON:0002420,2.61e-09,8;UBERON:0007245,2.61e-09,8;UBERON:0010009,2.61e-09,8;UBERON:0010011,2.61e-09,8;UBERON:0000454,2.61e-09,8;UBERON:0002240,2.09e-07,6;UBERON:0005174,2.09e-07,6;UBERON:0001137,2.09e-07,6;UBERON:0001948,3.27e-07,5;UBERON:0002315,3.27e-07,5|phase1_expression=1.44133962394315,1.04692622291808,0,0.90739263392049,0.500895729946347,0.503637815735669,0.467225281191051,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.425216450755349,0,0,0.639969691173627,0.91763712426868,0.57423196411502,0.430761996159075,0.215471232685889,0.950117097281869,0.756090389279792,1.10865255327652,0,0,0,1.44425809875637,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0,0.782391344348039,3.48840250208714,1.31811709640683,2.3331587888914,1.53985063787899,1.43752564364972,0,0,0,0,0.85960031981627,0,4.24864567805155,6.34789175126439,2.53532561402472,0,0.889294796111139,0,0.988866362566974,0,1.19840044207362,3.45796474789399,1.45165457231869,1.35005938331691,0.841299845405528,8.56952953211411,7.06779331045163,1.34739879136449,0.575072826109418,0.919218786610021,4.40463523997555,3.57524546638526,2.15049146558741,6.19865552331911,6.31264740856627,4.16730696445408,2.79182999001381,4.50210088025344,4.12555268997387,5.59794312399969,4.9830088279686,6.15118171223492,0.37863096666592,0.604572480854284,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,1.26759077799012,0,0,0,0,0,0,0.11418387971906,0,0,0.693941307064543,0.304465478312141,0.461230994512117,0.150722640552623,0.940709657085638,0.251333182659351,0,0.144599356919912,0,0.808834249737046,0,0.484875253135222,0,4.09893115816166,3.97948742945565,0.255457055208591,0.11981512450592,0,0,3.74476598512057,1.83000241127451,2.89005009859588,2.60736480288415,3.06858548796397,3.74018480207208,1.94689515681309,0.81471491080253,0.124406970610093,0.252722758433675,0.631325567659422,0.390361328888111,0.459804208866946,1.26043490863744,0.753524089178575,0.680364991513279,0.2562274405697,1.3118241438362,0.517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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67063 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q91YV9,A2AKL1 | |||
|association_with_transcript=0bp_to_ENSMUST00000042750,NM_025944,uc008svx.2_5end | |||
|cluster_id=chr4:49610732..49610764,- | |||
|description=CAGE_peak_5_at_2810432L12Rik_5end | |||
|id=chr4:49610732..49610764,- | |||
|ontology_enrichment_celltype=CL:0000221!7.36e-13!44;CL:0000133!7.36e-13!44;CL:0002319!1.49e-12!43;CL:0000117!1.56e-12!23;CL:0000337!1.56e-12!23;CL:0000540!3.74e-10!33;CL:0000047!3.74e-10!33;CL:0000031!3.74e-10!33;CL:0000404!3.74e-10!33;CL:0000055!5.65e-09!50;CL:0000393!2.76e-07!39;CL:0000211!2.76e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.65e-17,23;CL:0000337,4.65e-17,23;CL:0000221,5.17e-15,44;CL:0000133,5.17e-15,44;CL:0002319,1.57e-14,43;CL:0000540,9.43e-12,33;CL:0000047,9.43e-12,33;CL:0000031,9.43e-12,33;CL:0000404,9.43e-12,33;CL:0000393,8.01e-09,39;CL:0000211,8.01e-09,39;CL:0002321,4.27e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.57e-24!73;UBERON:0005743!1.57e-24!73;UBERON:0000073!5.68e-24!75;UBERON:0001016!5.68e-24!75;UBERON:0001049!4.37e-20!52;UBERON:0005068!4.37e-20!52;UBERON:0006241!4.37e-20!52;UBERON:0007135!4.37e-20!52;UBERON:0000955!1.33e-18!50;UBERON:0006238!1.33e-18!50;UBERON:0004121!3.50e-18!102;UBERON:0000924!3.50e-18!102;UBERON:0006601!3.50e-18!102;UBERON:0002616!4.20e-18!49;UBERON:0002020!1.33e-17!34;UBERON:0000033!4.65e-17!63;UBERON:0002346!3.44e-16!71;UBERON:0003075!3.44e-16!71;UBERON:0007284!3.44e-16!71;UBERON:0002791!4.44e-14!29;UBERON:0003528!4.44e-14!29;UBERON:0001893!4.44e-14!29;UBERON:0003080!1.53e-13!40;UBERON:0002780!5.97e-13!39;UBERON:0001890!5.97e-13!39;UBERON:0006240!5.97e-13!39;UBERON:0003056!1.39e-12!49;UBERON:0000025!2.31e-11!114;UBERON:0004111!1.78e-10!122;UBERON:0000956!2.51e-09!21;UBERON:0001869!2.51e-09!21;UBERON:0000203!2.51e-09!21;UBERON:0000468!6.40e-09!333;UBERON:0002619!3.50e-08!17;UBERON:0003076!1.64e-07!12;UBERON:0003057!1.64e-07!12;UBERON:0000922!8.68e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.62e-33,73;UBERON:0001016,4.10e-32,75;UBERON:0000073,5.39e-31,54;UBERON:0001049,1.99e-28,52;UBERON:0005068,1.99e-28,52;UBERON:0006241,1.99e-28,52;UBERON:0007135,1.99e-28,52;UBERON:0002020,1.62e-25,34;UBERON:0004121,2.35e-24,95;UBERON:0000924,2.35e-24,95;UBERON:0006601,2.35e-24,95;UBERON:0000955,3.74e-23,47;UBERON:0006238,3.74e-23,47;UBERON:0010314,9.89e-23,92;UBERON:0002346,1.72e-22,64;UBERON:0003075,1.72e-22,64;UBERON:0007284,1.72e-22,64;UBERON:0002616,2.31e-22,46;UBERON:0010371,6.98e-20,73;UBERON:0003528,9.33e-20,29;UBERON:0002791,9.33e-20,29;UBERON:0001893,9.33e-20,29;UBERON:0003080,1.25e-18,40;UBERON:0002780,1.11e-17,39;UBERON:0001890,1.11e-17,39;UBERON:0006240,1.11e-17,39;UBERON:0003056,3.08e-15,49;UBERON:0000025,1.48e-13,114;UBERON:0004111,6.33e-13,122;UBERON:0000956,4.68e-12,21;UBERON:0001869,4.68e-12,21;UBERON:0000203,4.68e-12,21;UBERON:0002619,5.09e-11,17;UBERON:0003076,1.47e-10,12;UBERON:0003057,1.47e-10,12;UBERON:0002021,6.08e-10,10;UBERON:0000411,6.08e-10,10;UBERON:0001950,6.08e-10,10;UBERON:0002420,2.61e-09,8;UBERON:0007245,2.61e-09,8;UBERON:0010009,2.61e-09,8;UBERON:0010011,2.61e-09,8;UBERON:0000454,2.61e-09,8;UBERON:0002240,2.09e-07,6;UBERON:0005174,2.09e-07,6;UBERON:0001137,2.09e-07,6;UBERON:0001948,3.27e-07,5;UBERON:0002315,3.27e-07,5 | |||
|phase1_expression=1.44133962394315,1.04692622291808,0,0.90739263392049,0.500895729946347,0.503637815735669,0.467225281191051,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.425216450755349,0,0,0.639969691173627,0.91763712426868,0.57423196411502,0.430761996159075,0.215471232685889,0.950117097281869,0.756090389279792,1.10865255327652,0,0,0,1.44425809875637,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0,0.782391344348039,3.48840250208714,1.31811709640683,2.3331587888914,1.53985063787899,1.43752564364972,0,0,0,0,0.85960031981627,0,4.24864567805155,6.34789175126439,2.53532561402472,0,0.889294796111139,0,0.988866362566974,0,1.19840044207362,3.45796474789399,1.45165457231869,1.35005938331691,0.841299845405528,8.56952953211411,7.06779331045163,1.34739879136449,0.575072826109418,0.919218786610021,4.40463523997555,3.57524546638526,2.15049146558741,6.19865552331911,6.31264740856627,4.16730696445408,2.79182999001381,4.50210088025344,4.12555268997387,5.59794312399969,4.9830088279686,6.15118171223492,0.37863096666592,0.604572480854284,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,1.26759077799012,0,0,0,0,0,0,0.11418387971906,0,0,0.693941307064543,0.304465478312141,0.461230994512117,0.150722640552623,0.940709657085638,0.251333182659351,0,0.144599356919912,0,0.808834249737046,0,0.484875253135222,0,4.09893115816166,3.97948742945565,0.255457055208591,0.11981512450592,0,0,3.74476598512057,1.83000241127451,2.89005009859588,2.60736480288415,3.06858548796397,3.74018480207208,1.94689515681309,0.81471491080253,0.124406970610093,0.252722758433675,0.631325567659422,0.390361328888111,0.459804208866946,1.26043490863744,0.753524089178575,0.680364991513279,0.2562274405697,1.3118241438362,0.517406741478031,0.646703978798527,0.378212160335639,0.703804496655795,0.219195732427575,0,1.39300866608867,0.411564272815887,0,0,0,0,1.44988040774851,1.87620847984877,1.62055855314913,0.946978942340841,2.16440654922144,1.85120535464854,1.39520366850245,0.804820204198858,1.40118410840603,1.31647879930784,0.32833492815819,1.21603214318784,1.02339991197733,0.878200461164203,1.07365135008297,1.47202963994889,3.08713837137853,0.660837565967596,0,0,0.464473343720877,0.515469845288373,0.403367049246685,0.22237804384487,0.760902504450237,0,0.494096864172033,1.25667604400135,0.994782360205754,0.58489226135736,2.69645822596266,0.648414149624083,0.199141273254367,0.948339504765408,0.799739588268102,2.25415471346161,1.62921062276251,0.775809948670503,0.98190147846446,0.632365371242573,0.738050739898011,1.56998727841375,0.863780147452604,0,0.500535317148282,0.393117990226406,0.449724224769707,0.811440485554012,0.241177159752417,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0.482443521363367,0.369506380333209,0.189491411770485,0.325929952884052,0.848725428875941,1.64283173801951,0.670025029767263,1.42826184531608,0.390267295715598,0.945810864637146,0.664394068946325,0.797273843287435,0.983179888294428,0.863424909329478,0.289298117163023,0,0,0.491764273019036,0.275936746304732,2.24770825982909,1.87538698547525,0,0.252470927204373,0.631016438832513,0.390438744296638,0.861693590931196,0.955875191810208,0.222798674082394,0.566153061577665,0.404810701674894,1.16902343164525,0,1.92792789853084,0.141940085208269,0.712262414669021,1.14020871547503,0.494910368917606,0,0.485561272309963,0.302323556964751,0.565815239267694,0.885905678642318,0.922305443831782,0.775284879504663,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0,0.643011105094777,0.177340233642274,1.24858172321449,1.97458824722545,0.913394847343798,0,0,0,0,0.645857706783622,0.422190474497091,0.596861720015682,0.656563598980245,0.291480836629851,1.11255181206306,0.341741761595705,0.82554747185289,1.48155621895769,0.376736914009382,0,0.228778173206523,0,0,0,0,0.316335993581135,0.813277868507395,0.756037385752609,0.627264888043406,0.87345025498471,1.07891477107857,0.909188012978695,0.523511883968059,0.259229946583586,0,0,0.149516546043979,0.330916980914195,0.388902376688095,0.258319646955462,1.18269287843545,0.704143431874524,1.0416350787516,0.314578033277133,0.483168241652012,0,0,0.810900861160657,0.513554785824136,0.25984164595559,0,0.198681354781265,0,0,0.201932899896295,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0.453460767230423,0,0,0,0.965947970160952,0.750729901804728,0.183151624267265,0.214368379079066,0,3.3885110557024,4.60325236507177,3.43737308063638,6.35856774671644,2.05524755931193,1.5107877947794,1.35004500046361,2.70192721934532,2.26571204492102,3.10656187051092,0.31136204275253,0,0.682934423016537,0.972426868273176,0.628839487883947,0.551530525350042,0.888986911206461,0.412070114477788,0.320919209591815,1.51618327058278,1.52087579934144,0.565879024158229,0.842773567228942,1.72867911493147,1.09127391015665,0.476293691283074,1.50649623728312,0.38581844092741,0.824171801606613,0.147198920134397,0.685738504770831,1.06485483695602,0.7153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| |||
|short_description=p5@2810432L12Rik | |||
}} |
Latest revision as of 02:10, 27 September 2015
Short description: | p5@2810432L12Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_2810432L12Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000042750, NM_025944, uc008svx.2_5end |
EntrezGene: | 2810432L12Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.65e-17 | 23 |
neuroblast (sensu Vertebrata) | 4.65e-17 | 23 |
ectodermal cell | 5.17e-15 | 44 |
neurectodermal cell | 5.17e-15 | 44 |
neural cell | 1.57e-14 | 43 |
neuron | 9.43e-12 | 33 |
neuronal stem cell | 9.43e-12 | 33 |
neuroblast | 9.43e-12 | 33 |
electrically signaling cell | 9.43e-12 | 33 |
electrically responsive cell | 8.01e-09 | 39 |
electrically active cell | 8.01e-09 | 39 |
embryonic cell | 4.27e-07 | 70 |